RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 ZDHHC1Q8WTX9 485 aa11.94□□□□□ -0.5
SMAD3-206ENST00000558739 RANBP9Q96S59 729 aa11.94□□□□□ -0.5
SMAD3-206ENST00000558739 LGR4Q9BXB1 951 aa11.94□□□□□ -0.5
SMAD3-206ENST00000558739 ZMYND15Q9H091 742 aa11.94□□□□□ -0.5
SMAD3-206ENST00000558739 ATP13A1Q9HD20 1204 aa11.94□□□□□ -0.5
SMAD3-206ENST00000558739 ENTPD4Q9Y227 616 aa11.94□□□□□ -0.5
SMAD3-206ENST00000558739 PCDHB4Q9Y5E5 795 aa11.94□□□□□ -0.5
SMAD3-206ENST00000558739 CNTRLQ7Z7A1 2325 aa11.94□□□□□ -0.5
SMAD3-206ENST00000558739 VPS13CQ709C8 3753 aa11.93□□□□□ -0.5
SMAD3-206ENST00000558739 NSD1Q96L73 2696 aaPredicted RBP11.93□□□□□ -0.5
SMAD3-206ENST00000558739 TMEM110-MUSTN1A8MSY1 372 aa11.93□□□□□ -0.5
SMAD3-206ENST00000558739 KATNA1O75449 491 aa11.93□□□□□ -0.5
SMAD3-206ENST00000558739 CBX6O95503 412 aa11.93□□□□□ -0.5
SMAD3-206ENST00000558739 SLC2A3P11169 496 aa11.93□□□□□ -0.5
SMAD3-206ENST00000558739 AK4P27144 223 aaPredicted RBP11.93□□□□□ -0.5
SMAD3-206ENST00000558739 ACVRL1P37023 503 aa11.93□□□□□ -0.5
SMAD3-206ENST00000558739 MC2RQ01718 297 aa11.93□□□□□ -0.5
SMAD3-206ENST00000558739 DCAF17Q5H9S7 520 aaPredicted RBP11.93□□□□□ -0.5
SMAD3-206ENST00000558739 JMJD6Q6NYC1 403 aaPredicted RBP11.93□□□□□ -0.5
SMAD3-206ENST00000558739 SETD3Q86TU7 594 aaPredicted RBP11.93□□□□□ -0.5
SMAD3-206ENST00000558739 TTC13Q8NBP0 860 aa11.93□□□□□ -0.5
SMAD3-206ENST00000558739 ARHGEF26Q96DR7 871 aa11.93□□□□□ -0.5
SMAD3-206ENST00000558739 SLC2A13Q96QE2 648 aa11.93□□□□□ -0.5
SMAD3-206ENST00000558739 TEFMQ96QE5 360 aaKnown RBP11.93□□□□□ -0.5
SMAD3-206ENST00000558739 SLC4A5Q9BY07 1137 aa11.93□□□□□ -0.5
SMAD3-206ENST00000558739 SLC29A3Q9BZD2 475 aa11.93□□□□□ -0.5
SMAD3-206ENST00000558739 TWSG1Q9GZX9 223 aa11.93□□□□□ -0.5
SMAD3-206ENST00000558739 MAGEF1Q9HAY2 307 aa11.93□□□□□ -0.5
SMAD3-206ENST00000558739 PIGVQ9NUD9 493 aa11.93□□□□□ -0.5
SMAD3-206ENST00000558739 TAAR2Q9P1P5 351 aa11.93□□□□□ -0.5
SMAD3-206ENST00000558739 KIAA1257Q9ULG3 409 aa11.93□□□□□ -0.5
SMAD3-206ENST00000558739 FLNAP21333 2647 aaKnown RBP11.93□□□□□ -0.5
SMAD3-206ENST00000558739 FUCA1P04066 466 aa11.92□□□□□ -0.5
SMAD3-206ENST00000558739 OR1E1P30953 314 aa11.92□□□□□ -0.5
SMAD3-206ENST00000558739 MCCD1P59942 119 aaPredicted RBP11.92□□□□□ -0.5
SMAD3-206ENST00000558739 CDK17Q00537 523 aa11.92□□□□□ -0.5
SMAD3-206ENST00000558739 ENPEPQ07075 957 aa11.92□□□□□ -0.5
SMAD3-206ENST00000558739 ADAM9Q13443 819 aa11.92□□□□□ -0.5
SMAD3-206ENST00000558739 SEMA5AQ13591 1074 aa11.92□□□□□ -0.5
SMAD3-206ENST00000558739 ZXDCQ2QGD7 858 aaPredicted RBP11.92□□□□□ -0.5
SMAD3-206ENST00000558739 ZCWPW2Q504Y3 356 aa11.92□□□□□ -0.5
SMAD3-206ENST00000558739 RETSATQ6NUM9 610 aa11.92□□□□□ -0.5
SMAD3-206ENST00000558739 SLC30A9Q6PML9 568 aa11.92□□□□□ -0.5
SMAD3-206ENST00000558739 CEACAM20Q6UY09 585 aa11.92□□□□□ -0.5
SMAD3-206ENST00000558739 APLFQ8IW19 511 aaPredicted RBP11.92□□□□□ -0.5
SMAD3-206ENST00000558739 NAGSQ8N159 534 aa11.92□□□□□ -0.5
SMAD3-206ENST00000558739 ESX1Q8N693 406 aa11.92□□□□□ -0.5
SMAD3-206ENST00000558739 GALNT6Q8NCL4 622 aa11.92□□□□□ -0.5
SMAD3-206ENST00000558739 KIAA1524Q8TCG1 905 aa11.92□□□□□ -0.5
SMAD3-206ENST00000558739 LURAP1Q96LR2 239 aa11.92□□□□□ -0.5
SMAD3-206ENST00000558739 RUFY1Q96T51 708 aa11.92□□□□□ -0.5
SMAD3-206ENST00000558739 SLC25A23Q9BV35 468 aa11.92□□□□□ -0.5
SMAD3-206ENST00000558739 ACP6Q9NPH0 428 aa11.92□□□□□ -0.5
SMAD3-206ENST00000558739 SERTAD1Q9UHV2 236 aa11.92□□□□□ -0.5
SMAD3-206ENST00000558739 MOSPD1Q9UJG1 213 aa11.92□□□□□ -0.5
SMAD3-206ENST00000558739 COQ4Q9Y3A0 265 aa11.92□□□□□ -0.5
SMAD3-206ENST00000558739 PCDHB3Q9Y5E6 796 aa11.92□□□□□ -0.5
SMAD3-206ENST00000558739 PRSS38A1L453 326 aa11.91□□□□□ -0.5
SMAD3-206ENST00000558739 A6NCN8 305 aa11.91□□□□□ -0.5
SMAD3-206ENST00000558739 INSIG1O15503 277 aa11.91□□□□□ -0.5
SMAD3-206ENST00000558739 ACTN4O43707 911 aaKnown RBP11.91□□□□□ -0.5
SMAD3-206ENST00000558739 CCNB1P14635 433 aa11.91□□□□□ -0.5
SMAD3-206ENST00000558739 KIAA1024LP59773 190 aa11.91□□□□□ -0.5
SMAD3-206ENST00000558739 YWHAEP62258 255 aaKnown RBP11.91□□□□□ -0.5
SMAD3-206ENST00000558739 MTM1Q13496 603 aa11.91□□□□□ -0.5
SMAD3-206ENST00000558739 NFIL3Q16649 462 aa11.91□□□□□ -0.5
SMAD3-206ENST00000558739 CLPPQ16740 277 aaPredicted RBP11.91□□□□□ -0.5
SMAD3-206ENST00000558739 MYLK3Q32MK0 819 aa11.91□□□□□ -0.5
SMAD3-206ENST00000558739 ZRANB3Q5FWF4 1079 aa11.91□□□□□ -0.5
SMAD3-206ENST00000558739 TCERG1LQ5VWI1 586 aa11.91□□□□□ -0.5
SMAD3-206ENST00000558739 SLC6A19Q695T7 634 aa11.91□□□□□ -0.5
SMAD3-206ENST00000558739 TMEM71Q6P5X7 295 aa11.91□□□□□ -0.5
SMAD3-206ENST00000558739 MYO7BQ6PIF6 2116 aa11.91□□□□□ -0.5
SMAD3-206ENST00000558739 DRC7Q8IY82 874 aa11.91□□□□□ -0.5
SMAD3-206ENST00000558739 OR2AP1Q8NGE2 309 aa11.91□□□□□ -0.5
SMAD3-206ENST00000558739 ULBP3Q9BZM4 244 aa11.91□□□□□ -0.5
SMAD3-206ENST00000558739 TKTL2Q9H0I9 626 aa11.91□□□□□ -0.5
SMAD3-206ENST00000558739 THAP9Q9H5L6 903 aa11.91□□□□□ -0.5
SMAD3-206ENST00000558739 MLXIPLQ9NP71 852 aa11.91□□□□□ -0.5
SMAD3-206ENST00000558739 NDFIP2Q9NV92 336 aa11.91□□□□□ -0.5
SMAD3-206ENST00000558739 ASF1BQ9NVP2 202 aa11.91□□□□□ -0.5
SMAD3-206ENST00000558739 COL6A5A8TX70 2615 aa11.9□□□□□ -0.5
SMAD3-206ENST00000558739 ILVBLA1L0T0 632 aa11.9□□□□□ -0.5
SMAD3-206ENST00000558739 PIPSLA2A3N6 862 aa11.9□□□□□ -0.5
SMAD3-206ENST00000558739 DRGXA6NNA5 263 aa11.9□□□□□ -0.5
SMAD3-206ENST00000558739 MAP3K6O95382 1288 aa11.9□□□□□ -0.5
SMAD3-206ENST00000558739 PIGNO95427 931 aa11.9□□□□□ -0.5
SMAD3-206ENST00000558739 SYT1P21579 422 aa11.9□□□□□ -0.5
SMAD3-206ENST00000558739 HNRNPH3P31942 346 aaKnown RBP11.9□□□□□ -0.5
SMAD3-206ENST00000558739 GPR3P46089 330 aa11.9□□□□□ -0.5
SMAD3-206ENST00000558739 LEPRP48357 1165 aaKnown RBP11.9□□□□□ -0.5
SMAD3-206ENST00000558739 LIG3P49916 1009 aa11.9□□□□□ -0.5
SMAD3-206ENST00000558739 RPS18P62269 152 aaKnown RBP11.9□□□□□ -0.5
SMAD3-206ENST00000558739 GNA12Q03113 381 aa11.9□□□□□ -0.5
SMAD3-206ENST00000558739 DNM1Q05193 864 aaKnown RBP11.9□□□□□ -0.5
SMAD3-206ENST00000558739 PTK2Q05397 1052 aa11.9□□□□□ -0.5
SMAD3-206ENST00000558739 PDCLQ13371 301 aa11.9□□□□□ -0.5
SMAD3-206ENST00000558739 RABEP1Q15276 862 aa11.9□□□□□ -0.5
SMAD3-206ENST00000558739 TESK1Q15569 626 aa11.9□□□□□ -0.5
SMAD3-206ENST00000558739 TMEM52BQ4KMG9 183 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms