RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 PGGT1BP53609 377 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 WDR4P57081 412 aaKnown RBP20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 SNRPD1P62314 119 aaKnown RBP20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 PRAMEP78395 509 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 PDE1BQ01064 536 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 RALGPS1Q5JS13 557 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 CDHR3Q6ZTQ4 885 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 LDB1Q86U70 411 aaPredicted RBP20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 ZSWIM9Q86XI8 627 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 ZNF366Q8N895 744 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 CHST14Q8NCH0 376 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 TCP10LQ8TDR4 215 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 NXPE3Q969Y0 559 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 MRGPRX3Q96LB0 322 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 ZDHHC6Q9H6R6 413 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 CAB39LQ9H9S4 337 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 SLC17A7Q9P2U7 560 aa20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 SMG5Q9UPR3 1016 aaKnown RBP20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 MTO1Q9Y2Z2 717 aaKnown RBP20.5■□□□□ 0.87
SNRPA1-205ENST00000558036 CNTFP26441 200 aa20.49■□□□□ 0.87
SNRPA1-205ENST00000558036 CSNK1DP48730 415 aa20.49■□□□□ 0.87
SNRPA1-205ENST00000558036 LIMK2P53671 638 aa20.49■□□□□ 0.87
SNRPA1-205ENST00000558036 SLC18A2Q05940 514 aa20.49■□□□□ 0.87
SNRPA1-205ENST00000558036 KDSRQ06136 332 aa20.49■□□□□ 0.87
SNRPA1-205ENST00000558036 FCHO2Q0JRZ9 810 aa20.49■□□□□ 0.87
SNRPA1-205ENST00000558036 MYLK3Q32MK0 819 aa20.49■□□□□ 0.87
SNRPA1-205ENST00000558036 NLRP9Q7RTR0 991 aa20.49■□□□□ 0.87
SNRPA1-205ENST00000558036 CMC1Q7Z7K0 106 aa20.49■□□□□ 0.87
SNRPA1-205ENST00000558036 MFSD6LQ8IWD5 586 aa20.49■□□□□ 0.87
SNRPA1-205ENST00000558036 CNTN4Q8IWV2 1026 aa20.49■□□□□ 0.87
SNRPA1-205ENST00000558036 DCLK2Q8N568 766 aa20.49■□□□□ 0.87
SNRPA1-205ENST00000558036 OTUD6BQ8N6M0 293 aa20.49■□□□□ 0.87
SNRPA1-205ENST00000558036 DENND1AQ8TEH3 1009 aa20.49■□□□□ 0.87
SNRPA1-205ENST00000558036 DYDC1Q8WWB3 177 aa20.49■□□□□ 0.87
SNRPA1-205ENST00000558036 PIH1D2Q8WWB5 315 aa20.49■□□□□ 0.87
SNRPA1-205ENST00000558036 ISG20Q96AZ6 181 aaKnown RBP20.49■□□□□ 0.87
SNRPA1-205ENST00000558036 MCMBPQ9BTE3 642 aa20.49■□□□□ 0.87
SNRPA1-205ENST00000558036 ATP13A3Q9H7F0 1226 aa20.49■□□□□ 0.87
SNRPA1-205ENST00000558036 OBP2AQ9NY56 170 aa20.49■□□□□ 0.87
SNRPA1-205ENST00000558036 PRRT4C9JH25 899 aa20.48■□□□□ 0.87
SNRPA1-205ENST00000558036 SPRP35270 261 aaPredicted RBP20.48■□□□□ 0.87
SNRPA1-205ENST00000558036 PTPRNQ16849 979 aa20.48■□□□□ 0.87
SNRPA1-205ENST00000558036 KIAA1958Q8N8K9 716 aa20.48■□□□□ 0.87
SNRPA1-205ENST00000558036 OR4K2Q8NGD2 314 aa20.48■□□□□ 0.87
SNRPA1-205ENST00000558036 VPS39Q96JC1 886 aa20.48■□□□□ 0.87
SNRPA1-205ENST00000558036 BPIFA1Q9NP55 256 aa20.48■□□□□ 0.87
SNRPA1-205ENST00000558036 MARCH4Q9P2E8 410 aaPredicted RBP20.48■□□□□ 0.87
SNRPA1-205ENST00000558036 GRID1Q9ULK0 1009 aa20.48■□□□□ 0.87
SNRPA1-205ENST00000558036 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.48■□□□□ 0.87
SNRPA1-205ENST00000558036 CRTAMO95727 393 aa20.48■□□□□ 0.87
SNRPA1-205ENST00000558036 ZNF140P52738 457 aaPredicted RBP20.48■□□□□ 0.87
SNRPA1-205ENST00000558036 SEMG2Q02383 582 aa20.48■□□□□ 0.87
SNRPA1-205ENST00000558036 CARD16Q5EG05 197 aa20.48■□□□□ 0.87
SNRPA1-205ENST00000558036 ZNF789Q5FWF6 425 aa20.48■□□□□ 0.87
SNRPA1-205ENST00000558036 PPM1JQ5JR12 505 aa20.48■□□□□ 0.87
SNRPA1-205ENST00000558036 NDUFAF2Q8N183 169 aa20.48■□□□□ 0.87
SNRPA1-205ENST00000558036 OR2A12Q8NGT7 310 aa20.48■□□□□ 0.87
SNRPA1-205ENST00000558036 GRIN3AQ8TCU5 1115 aa20.48■□□□□ 0.87
SNRPA1-205ENST00000558036 APOPT1Q96IL0 206 aa20.48■□□□□ 0.87
SNRPA1-205ENST00000558036 FBXO6Q9NRD1 293 aaPredicted RBP20.48■□□□□ 0.87
SNRPA1-205ENST00000558036 LMCD1Q9NZU5 365 aa20.48■□□□□ 0.87
SNRPA1-205ENST00000558036 FNDC3AQ9Y2H6 1198 aaKnown RBP20.48■□□□□ 0.87
SNRPA1-205ENST00000558036 DOCK8Q8NF50 2099 aa20.48■□□□□ 0.87
SNRPA1-205ENST00000558036 ANKRD36A6QL64 1941 aa20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 CCDC162PA2VCL2 907 aa20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 A8MX80 341 aa20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 HTRA2O43464 458 aaPredicted RBP20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 PRSS56P0CW18 603 aa20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 SAT1P21673 171 aa20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 ACVR1Q04771 509 aa20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 GRM3Q14832 879 aa20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 PDGFRLQ15198 375 aa20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 TAF1AQ15573 450 aaPredicted RBP20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 ZC3HC1Q86WB0 502 aaKnown RBP20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 YAF2Q8IY57 180 aa20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 PCDH20Q8N6Y1 951 aaKnown RBP20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 CENPTQ96BT3 561 aa20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 RIPOR3Q96MK2 946 aa20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 CEP44Q9C0F1 390 aa20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 FAM107BQ9H098 131 aa20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 SSU72Q9NP77 194 aaKnown RBP20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 POLR3BQ9NW08 1133 aaPredicted RBP20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 DEC1Q9P2X7 70 aa20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 FBXO5Q9UKT4 447 aa20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 CXorf51AA0A1B0GTR3 108 aa20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 COPEO14579 308 aa20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 HAUS5O94927 633 aa20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 GOT2P00505 430 aaKnown RBP20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 SERPINA4P29622 427 aa20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 MAPK8P45983 427 aa20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 TIFABQ6ZNK6 161 aa20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 C2CD4AQ8NCU7 369 aaPredicted RBP20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 FRS2Q8WU20 508 aa20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 ALKBH8Q96BT7 664 aaKnown RBP20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 MSLNLQ96KJ4 702 aa20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 SRPK1Q96SB4 655 aaKnown RBP20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 FAM167BQ9BTA0 163 aa20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 SLC27A6Q9Y2P4 619 aa20.47■□□□□ 0.87
SNRPA1-205ENST00000558036 ANTXRLA6NF34 631 aa20.46■□□□□ 0.87
SNRPA1-205ENST00000558036 C2orf81A6NN90 581 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms