RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 VASPP50552 380 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-233ENST00000557529 ARSDP51689 593 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 CLCN5P51795 746 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 ZNF140P52738 457 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-233ENST00000557529 MPP1Q00013 466 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 RAD51Q06609 339 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 DMTNQ08495 405 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 CTBP1Q13363 440 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 PDGFRLQ15198 375 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 DBN1Q16643 649 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 MYLK3Q32MK0 819 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 TCEAL5Q5H9L2 206 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 DGKKQ5KSL6 1271 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 GKAP1Q5VSY0 366 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-233ENST00000557529 MBLAC2Q68D91 279 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 MRNIPQ6NTE8 343 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 AFTPHQ6ULP2 937 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 GET4Q7L5D6 327 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-233ENST00000557529 ADIPOR2Q86V24 386 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 DENND6AQ8IWF6 608 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 TRIM42Q8IWZ5 723 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 PLPP6Q8IY26 295 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 RSPRY1Q96DX4 576 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 ATXN7L3BQ96GX2 97 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 DNAJC1Q96KC8 554 aaKnown RBP12.53□□□□□ -0.4
SHMT2-233ENST00000557529 RPL10LQ96L21 214 aaKnown RBP12.53□□□□□ -0.4
SHMT2-233ENST00000557529 TBATAQ96M53 351 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 LRRC3BQ96PB8 259 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 MAGEE1Q9HCI5 957 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 CDH7Q9ULB5 785 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 SLC39A10Q9ULF5 831 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 KCTD3Q9Y597 815 aa12.53□□□□□ -0.4
SHMT2-233ENST00000557529 A0A096LPK6 155 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 A0A1W2PQ67 120 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 HEPACAM2A8MVW5 462 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 BIRC5O15392 142 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 CD3EAPO15446 510 aaKnown RBP12.52□□□□□ -0.41
SHMT2-233ENST00000557529 ZNF821O75541 412 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-233ENST00000557529 POP4O95707 220 aaKnown RBP12.52□□□□□ -0.41
SHMT2-233ENST00000557529 GABRB3P28472 473 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 CRABP2P29373 138 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 NNMTP40261 264 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 ABL2P42684 1182 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 SERPINB4P48594 390 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 DGKGP49619 791 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 STK19P49842 368 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-233ENST00000557529 TMPRSS15P98073 1019 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 POU4F1Q01851 419 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 USP10Q14694 798 aaKnown RBP12.52□□□□□ -0.41
SHMT2-233ENST00000557529 TAF1BQ53T94 588 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-233ENST00000557529 CARD16Q5EG05 197 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 ATAT1Q5SQI0 421 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 SYCE2Q6PIF2 218 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 CDHR3Q6ZTQ4 885 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 PTAR1Q7Z6K3 402 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-233ENST00000557529 SDCCAG8Q86SQ7 713 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-233ENST00000557529 CAMK1DQ8IU85 385 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 CILP2Q8IUL8 1156 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 PAF1Q8N7H5 531 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 MDGA1Q8NFP4 955 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 OR13C4Q8NGS5 318 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 OR4L1Q8NH43 312 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 PIH1D2Q8WWB5 315 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 GRAMD1AQ96CP6 724 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 CDKN2AIPNLQ96HQ2 116 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 TSNARE1Q96NA8 513 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 C19orf43Q9BQ61 176 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 APOL5Q9BWW9 433 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 CPEB1Q9BZB8 566 aaKnown RBP12.52□□□□□ -0.41
SHMT2-233ENST00000557529 TNKS2Q9H2K2 1166 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 HECAQ9UBI9 543 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-233ENST00000557529 TLK1Q9UKI8 766 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 CORO1CQ9ULV4 474 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-233ENST00000557529 SLC8A2Q9UPR5 921 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 ERVW-1Q9UQF0 538 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 SLC27A6Q9Y2P4 619 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 MYLKQ15746 1914 aa12.52□□□□□ -0.41
SHMT2-233ENST00000557529 CHD9Q3L8U1 2897 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 FAM95CA0A1B0GW59 222 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 CCDC162PA2VCL2 907 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 EBAG9O00559 213 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 TRAFD1O14545 582 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-233ENST00000557529 STX7O15400 261 aaKnown RBP12.51□□□□□ -0.41
SHMT2-233ENST00000557529 GOT2P00505 430 aaKnown RBP12.51□□□□□ -0.41
SHMT2-233ENST00000557529 ATP5BP06576 529 aaKnown RBP12.51□□□□□ -0.41
SHMT2-233ENST00000557529 C2P06681 752 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 SRPRAP08240 638 aaKnown RBP12.51□□□□□ -0.41
SHMT2-233ENST00000557529 CISD3P0C7P0 127 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 NEFHP12036 1026 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 COL6A2P12110 1019 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 STMN1P16949 149 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 SLC8A1P32418 973 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 RECQLP46063 649 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-233ENST00000557529 CSRP3P50461 194 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 SLC12A2P55011 1212 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 ADAM15Q13444 863 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 DLG2Q15700 870 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 CCDC153Q494R4 210 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 ACCSLQ4AC99 568 aa12.51□□□□□ -0.41
SHMT2-233ENST00000557529 N4BP2L1Q5TBK1 243 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms