RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 NEUROD4Q9HD90 331 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 HBP1O60381 514 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 CAPZA1P52907 286 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 LARS2Q15031 903 aaKnown RBP8.86□□□□□ -0.99
SYNE3-205ENST00000557275 RNASEH2BQ5TBB1 312 aaKnown RBP8.86□□□□□ -0.99
SYNE3-205ENST00000557275 HAGHLQ6PII5 290 aaPredicted RBP8.86□□□□□ -0.99
SYNE3-205ENST00000557275 RBM44Q6ZP01 1051 aaKnown RBP8.86□□□□□ -0.99
SYNE3-205ENST00000557275 SPATA22Q8NHS9 363 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 CBWD1Q9BRT8 395 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 ENY2Q9NPA8 101 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 MAFFQ9ULX9 164 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 FAM186AA6NE01 2351 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 A2ML1A8K2U0 1454 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 TSTD3H0UI37 97 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 GH2P01242 217 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 CCDC28AQ8IWP9 274 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 CPNE9Q8IYJ1 553 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 ANKFN1Q8N957 763 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 THUMPD1Q9NXG2 353 aaKnown RBP8.86□□□□□ -0.99
SYNE3-205ENST00000557275 GPSM2P81274 684 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 PLEKHG6Q3KR16 790 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 CBWD6Q4V339 395 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 GPR158Q5T848 1215 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 OR51D1Q8NGF3 324 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 CD320Q9NPF0 282 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 CEP250Q9BV73 2442 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 PRKD3O94806 890 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 HMBSP08397 361 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 KCNA5P22460 613 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 HTR2AP28223 471 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 TUFMP49411 452 aaKnown RBP8.86□□□□□ -0.99
SYNE3-205ENST00000557275 SPIBQ01892 262 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 MGAT5BQ3V5L5 792 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 NYAP1Q6ZVC0 841 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 P2RY8Q86VZ1 359 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 TTLL6Q8N841 843 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 KIAA0556O60303 1618 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 SLC9A3R1O14745 358 aaPredicted RBP8.86□□□□□ -0.99
SYNE3-205ENST00000557275 CKMP06732 381 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 YAP1P46937 504 aaKnown RBP8.86□□□□□ -0.99
SYNE3-205ENST00000557275 TSPAN5P62079 268 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 FASTKD3Q14CZ7 662 aaKnown RBP8.86□□□□□ -0.99
SYNE3-205ENST00000557275 ARL10Q8N8L6 244 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 OR52K1Q8NGK4 314 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 TRPM4Q8TD43 1214 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 REXO2Q9Y3B8 237 aaKnown RBP8.86□□□□□ -0.99
SYNE3-205ENST00000557275 DCDC2CA8MYV0 355 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 TRAFD1O14545 582 aaPredicted RBP8.86□□□□□ -0.99
SYNE3-205ENST00000557275 TSPAN1O60635 241 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 SLC25A27O95847 323 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 CKBP12277 381 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 MATKP42679 507 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 LIPEQ05469 1076 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 ASTE1Q2TB18 679 aaPredicted RBP8.86□□□□□ -0.99
SYNE3-205ENST00000557275 FAXCQ5TGI0 409 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 FAM98AQ8NCA5 519 aaKnown RBP8.86□□□□□ -0.99
SYNE3-205ENST00000557275 CYP4F12Q9HCS2 524 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 C5orf51A6NDU8 294 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 FAM228BP0C875 321 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 VDRP11473 427 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 SIPA1Q96FS4 1042 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 ITGA11Q9UKX5 1188 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 RPH3AQ9Y2J0 694 aaPredicted RBP8.86□□□□□ -0.99
SYNE3-205ENST00000557275 IFNA1P01562 189 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 ITGA2BP08514 1039 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 TACSTD2P09758 323 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 ALDH4A1P30038 563 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 EPHB3P54753 998 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 PRAMEF17Q5VTA0 474 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 ZCCHC9Q8N567 271 aaKnown RBP8.86□□□□□ -0.99
SYNE3-205ENST00000557275 OR2L8Q8NGY9 312 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 MARK4Q96L34 752 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 HIST1H2AAQ96QV6 131 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 MYNNQ9NPC7 610 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 KANSL3Q9P2N6 904 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 RAMP2O60895 175 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 HLA-DRAP01903 254 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 NTRK1P04629 796 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 GYPCP04921 128 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 ABHD2P08910 425 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 FXR2P51116 673 aaKnown RBP eCLIP8.86□□□□□ -0.99
SYNE3-205ENST00000557275 FGL1Q08830 312 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 DGLUCYQ7Z3D6 616 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 OR6J1Q8NGC5 347 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 VSTM5A8MXK1 200 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 GRIN3BO60391 1043 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 RHOCP08134 193 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 ACSL1P33121 698 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 RPS9P46781 194 aaKnown RBP8.86□□□□□ -0.99
SYNE3-205ENST00000557275 TPTEP56180 551 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 PCBP1Q15365 356 aaKnown RBP eCLIP8.86□□□□□ -0.99
SYNE3-205ENST00000557275 SLC47A1Q96FL8 570 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 QRICH2Q9H0J4 1663 aa8.86□□□□□ -0.99
SYNE3-205ENST00000557275 TTC34A8MYJ7 566 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 FGBP02675 491 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 ADRA2BP18089 450 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 OR3A3P47888 321 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 OR3A2P47893 321 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 GRAPQ13588 217 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 TEAD4Q15561 434 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms