RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 MIS18BP1Q6P0N0 1132 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 FBXO38Q6PIJ6 1188 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 CACNA2D4Q7Z3S7 1137 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 USP37Q86T82 979 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 UNC45BQ8IWX7 931 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 NELFCDQ8IXH7 590 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 RHOT1Q8IXI2 618 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 TMEM132CQ8N3T6 1108 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 DCBLD1Q8N8Z6 715 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 KCTD6Q8NC69 237 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 GPR150Q8NGU9 434 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 MOSPD2Q8NHP6 518 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 SCFD1Q8WVM8 642 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 ASB10Q8WXI3 467 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 TAF4BQ92750 862 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 SYN2Q92777 582 aaPredicted RBP5.32□□□□□ -1.56
SRP54-211ENST00000556445 KIFAP3Q92845 792 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 MOGAT1Q96PD6 335 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 ACCSQ96QU6 501 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 ZSWIM1Q9BR11 485 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 HGH1Q9BTY7 390 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 MOV10L1Q9BXT6 1211 aaKnown RBP5.32□□□□□ -1.56
SRP54-211ENST00000556445 ITPAQ9BY32 194 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 TSGA10Q9BZW7 698 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 ST6GALNAC4Q9H4F1 302 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 EIF2B3Q9NR50 452 aaKnown RBP5.32□□□□□ -1.56
SRP54-211ENST00000556445 RXFP3Q9NSD7 469 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 CYP39A1Q9NYL5 469 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 ARMCX3Q9UH62 379 aaPredicted RBP5.32□□□□□ -1.56
SRP54-211ENST00000556445 AFF4Q9UHB7 1163 aaKnown RBP5.32□□□□□ -1.56
SRP54-211ENST00000556445 PACSIN3Q9UKS6 424 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 MYO6Q9UM54 1294 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 TBX20Q9UMR3 447 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 PCDHB1Q9Y5F3 818 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 PCDHA10Q9Y5I2 948 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 RLFQ13129 1914 aa5.32□□□□□ -1.56
SRP54-211ENST00000556445 COL11A1P12107 1806 aaPredicted RBP5.32□□□□□ -1.56
SRP54-211ENST00000556445 EP400Q96L91 3159 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 PTPRFP10586 1907 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 SSC5DA1L4H1 1573 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 PIPSLA2A3N6 862 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 HMX3A6NHT5 357 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 EIF3CLB5ME19 914 aaKnown RBP5.31□□□□□ -1.56
SRP54-211ENST00000556445 H3BUI4 141 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 PIP5K1BO14986 540 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 KIAA0391O15091 583 aaKnown RBP5.31□□□□□ -1.56
SRP54-211ENST00000556445 MAPK13O15264 365 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 N4BP1O75113 896 aaKnown RBP5.31□□□□□ -1.56
SRP54-211ENST00000556445 BEST1O76090 585 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 SLU7O95391 586 aaKnown RBP5.31□□□□□ -1.56
SRP54-211ENST00000556445 NDST3O95803 873 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 GUCA1CO95843 209 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 AFPP02771 609 aaKnown RBP5.31□□□□□ -1.56
SRP54-211ENST00000556445 NR3C1P04150 777 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 TK1P04183 234 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 ANXA2P07355 339 aaKnown RBP5.31□□□□□ -1.56
SRP54-211ENST00000556445 ITGA2BP08514 1039 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 CCDC172P0C7W6 258 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 MYL4P12829 197 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 KRT13P13646 458 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 RPS2P15880 293 aaKnown RBP5.31□□□□□ -1.56
SRP54-211ENST00000556445 EN2P19622 333 aaPredicted RBP5.31□□□□□ -1.56
SRP54-211ENST00000556445 FGFR4P22455 802 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 ANXA13P27216 316 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 ABCD3P28288 659 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 YWHABP31946 246 aaKnown RBP5.31□□□□□ -1.56
SRP54-211ENST00000556445 PSMC2P35998 433 aaKnown RBP5.31□□□□□ -1.56
SRP54-211ENST00000556445 RARRES1P49788 294 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 CTXN1P60606 82 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 ACTR2P61160 394 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 FKBP1BP68106 108 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 ENPEPQ07075 957 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 CETN1Q12798 172 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 IFT88Q13099 833 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 NEDD9Q14511 834 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 SPA17Q15506 151 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 XKR3Q5GH77 459 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 C3orf38Q5JPI3 329 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 RAB12Q6IQ22 244 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 ARMC6Q6NXE6 501 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 SLC22A25Q6T423 547 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 KLHL17Q6TDP4 642 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 SLC30A10Q6XR72 485 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 GADL1Q6ZQY3 521 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 ZNF720Q7Z2F6 126 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 SLFN11Q7Z7L1 901 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 TTC7BQ86TV6 843 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 SLC44A2Q8IWA5 706 aaPredicted RBP5.31□□□□□ -1.56
SRP54-211ENST00000556445 C12orf56Q8IXR9 622 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 SYCP3Q8IZU3 236 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 MCPH1Q8NEM0 835 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 GDAP1Q8TB36 358 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 IFI44Q8TCB0 444 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 UTP15Q8TED0 518 aaKnown RBP5.31□□□□□ -1.56
SRP54-211ENST00000556445 PIGOQ8TEQ8 1089 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 TMEM174Q8WUU8 243 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 ZNF606Q8WXB4 792 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 LINC00476Q8WZB0 136 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 RAB24Q969Q5 203 aa5.31□□□□□ -1.56
SRP54-211ENST00000556445 FUBP1Q96AE4 644 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms