RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 GSDMBQ8TAX9 411 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 GANCQ8TET4 914 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 ANKRD7Q92527 254 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 ECHDC3Q96DC8 303 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 SCRN2Q96FV2 425 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 CFAP36Q96G28 342 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 C9orf72Q96LT7 481 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 PWWP2AQ96N64 755 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 OMDQ99983 421 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 C19orf43Q9BQ61 176 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 IER2Q9BTL4 223 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 HDAC8Q9BY41 377 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 RSPH9Q9H1X1 276 aaPredicted RBP9.26□□□□□ -0.93
ACTN1-218ENST00000556343 CDC42EP4Q9H3Q1 356 aaKnown RBP9.26□□□□□ -0.93
ACTN1-218ENST00000556343 SEMA4AQ9H3S1 761 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 MFSD1Q9H3U5 465 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 ZFYVE1Q9HBF4 777 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 LTB4R2Q9NPC1 389 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 SYBUQ9NX95 663 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 KCTD5Q9NXV2 234 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 NINJ2Q9NZG7 142 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 MMP17Q9ULZ9 603 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 PPIL1Q9Y3C6 166 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 TCAF1Q9Y4C2 921 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 IKBKGQ9Y6K9 419 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 RPS6KL1Q9Y6S9 549 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 FAM169AQ9Y6X4 670 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 SHROOM3Q8TF72 1996 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 XIRP2A4UGR9 3374 aa9.26□□□□□ -0.93
ACTN1-218ENST00000556343 NYNRINQ9P2P1 1898 aaKnown RBP9.25□□□□□ -0.93
ACTN1-218ENST00000556343 F5P12259 2224 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 MYO18AQ92614 2054 aaKnown RBP9.25□□□□□ -0.93
ACTN1-218ENST00000556343 TSPAN11A1L157 253 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 RGSL1A5PLK6 1076 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 GOLGA6L10A6NI86 522 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 CHURC1-FNTBB4DL54 471 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 NEMP1O14524 444 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 RIPK2O43353 540 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 ACSL3O95573 720 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 PRLP01236 227 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 PDHA1P08559 390 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 CHRNB1P11230 501 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 ZNF30P17039 623 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 VIPR1P32241 457 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 SLC8A1P32418 973 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 HSD17B3P37058 310 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 PPARGP37231 505 aaPredicted RBP9.25□□□□□ -0.93
ACTN1-218ENST00000556343 CHRNA4P43681 627 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 PSMD8P48556 350 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 NEK3P51956 506 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 DGKEP52429 567 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 PTPN5P54829 565 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 PRAMEP78395 509 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 ZXDAP98168 799 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 SATB1Q01826 763 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 OLIG2Q13516 323 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 THOC5Q13769 683 aaKnown RBP9.25□□□□□ -0.93
ACTN1-218ENST00000556343 LONRF1Q17RB8 773 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 ANKRD20A4Q4UJ75 823 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 MSS51Q4VC12 460 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 HP1BP3Q5SSJ5 553 aaPredicted RBP9.25□□□□□ -0.93
ACTN1-218ENST00000556343 TSTD2Q5T7W7 516 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 LGSNQ5TDP6 509 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 PDPK2PQ6A1A2 396 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 TMEM135Q86UB9 458 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 KBTBD6Q86V97 674 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 TMPRSS6Q8IU80 811 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 SFTPA1Q8IWL2 248 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 LMNTD2Q8IXW0 634 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 RAVER1Q8IY67 606 aaKnown RBP9.25□□□□□ -0.93
ACTN1-218ENST00000556343 GOLGA6L1Q8N7Z2 621 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.25□□□□□ -0.93
ACTN1-218ENST00000556343 CALML6Q8TD86 181 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 ZNF669Q96BR6 464 aaPredicted RBP9.25□□□□□ -0.93
ACTN1-218ENST00000556343 LYSMD1Q96S90 227 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 FAM129BQ96TA1 746 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 CYTH2Q99418 400 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 ACOX2Q99424 681 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 TTC1Q99614 292 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 TXLNGYQ9BZA5 131 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 ROPN1BQ9BZX4 212 aaPredicted RBP9.25□□□□□ -0.93
ACTN1-218ENST00000556343 MTG2Q9H4K7 406 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 VIPAS39Q9H9C1 493 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 ROPN1Q9HAT0 212 aaPredicted RBP9.25□□□□□ -0.93
ACTN1-218ENST00000556343 LRRC4CQ9HCJ2 640 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 PPANQ9NQ55 473 aaKnown RBP9.25□□□□□ -0.93
ACTN1-218ENST00000556343 PIH1D1Q9NWS0 290 aaKnown RBP9.25□□□□□ -0.93
ACTN1-218ENST00000556343 NSMCE4AQ9NXX6 385 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 PKD2L2Q9NZM6 624 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 TXNDC16Q9P2K2 825 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 HCN2Q9UL51 889 aa9.25□□□□□ -0.93
ACTN1-218ENST00000556343 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.25□□□□□ -0.93
ACTN1-218ENST00000556343 KIF26AQ9ULI4 1882 aaPredicted RBP9.25□□□□□ -0.93
ACTN1-218ENST00000556343 C5orf42Q9H799 3197 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 C1orf232A0A0U1RR37 186 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 MROH6A6NGR9 719 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 CAPN8A6NHC0 703 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 OPA1O60313 960 aa9.24□□□□□ -0.93
ACTN1-218ENST00000556343 RPP40O75818 363 aaKnown RBP9.24□□□□□ -0.93
ACTN1-218ENST00000556343 CTSLP07711 333 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms