RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 SYT11Q9BT88 431 aa14.45□□□□□ -0.1
CHMP4BP1-201ENST00000556017 LGR4Q9BXB1 951 aa14.45□□□□□ -0.1
CHMP4BP1-201ENST00000556017 LRRN3Q9H3W5 708 aa14.45□□□□□ -0.1
CHMP4BP1-201ENST00000556017 SYNDIG1Q9H7V2 258 aa14.45□□□□□ -0.1
CHMP4BP1-201ENST00000556017 EPB41L5Q9HCM4 733 aa14.45□□□□□ -0.1
CHMP4BP1-201ENST00000556017 MRPL40Q9NQ50 206 aaKnown RBP14.45□□□□□ -0.1
CHMP4BP1-201ENST00000556017 GPATCH2LQ9NWQ4 482 aa14.45□□□□□ -0.1
CHMP4BP1-201ENST00000556017 ZFC3H1O60293 1989 aaKnown RBP14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 TRAFD1O14545 582 aaPredicted RBP14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 NVLO15381 856 aaKnown RBP14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 CREB3O43889 395 aa14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 PCCBP05166 539 aa14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 TRIM23P36406 574 aa14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 ARSDP51689 593 aa14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 INHBCP55103 352 aa14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 KIAA1024LP59773 190 aa14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 EIF3IQ13347 325 aaKnown RBP14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 EFHC2Q5JST6 749 aa14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 LIPIQ6XZB0 460 aa14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 ARHGAP36Q6ZRI8 547 aa14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 APTXQ7Z2E3 356 aaKnown RBP14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 SPRED1Q7Z699 444 aa14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 C17orf82Q86X59 251 aaPredicted RBP14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 DTX1Q86Y01 620 aa14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 ZNF354CQ86Y25 554 aa14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 SLITRK4Q8IW52 837 aa14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 TP53INP2Q8IXH6 220 aa14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 ENOX1Q8TC92 643 aaKnown RBP14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 CELF6Q96J87 481 aaKnown RBP14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 WDR92Q96MX6 357 aa14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 ZNF641Q96N77 438 aaPredicted RBP14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 MCEEQ96PE7 176 aa14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 PEBP4Q96S96 227 aa14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 CNPY3Q9BT09 278 aa14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 SELENOOQ9BVL4 669 aa14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 SLC39A8Q9C0K1 460 aa14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 TMEM168Q9H0V1 697 aa14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 FOXJ2Q9P0K8 574 aa14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 UBA2Q9UBT2 640 aaPredicted RBP14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 KLQ9UEF7 1012 aa14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 ATP8A1Q9Y2Q0 1164 aa14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 ST14Q9Y5Y6 855 aa14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 RNF215Q9Y6U7 377 aa14.44□□□□□ -0.1
CHMP4BP1-201ENST00000556017 RECQL5O94762 991 aaPredicted RBP14.43□□□□□ -0.1
CHMP4BP1-201ENST00000556017 CALB1P05937 261 aa14.43□□□□□ -0.1
CHMP4BP1-201ENST00000556017 CTSEP14091 401 aa14.43□□□□□ -0.1
CHMP4BP1-201ENST00000556017 NSFP46459 744 aaKnown RBP14.43□□□□□ -0.1
CHMP4BP1-201ENST00000556017 CSNK1DP48730 415 aa14.43□□□□□ -0.1
CHMP4BP1-201ENST00000556017 HLTFQ14527 1009 aaKnown RBP eCLIP14.43□□□□□ -0.1
CHMP4BP1-201ENST00000556017 CT47A1Q5JQC4 288 aaPredicted RBP14.43□□□□□ -0.1
CHMP4BP1-201ENST00000556017 SCYL2Q6P3W7 929 aa14.43□□□□□ -0.1
CHMP4BP1-201ENST00000556017 BRAT1Q6PJG6 821 aa14.43□□□□□ -0.1
CHMP4BP1-201ENST00000556017 SRLQ86TD4 932 aa14.43□□□□□ -0.1
CHMP4BP1-201ENST00000556017 GKN2Q86XP6 184 aa14.43□□□□□ -0.1
CHMP4BP1-201ENST00000556017 NRROSQ86YC3 692 aa14.43□□□□□ -0.1
CHMP4BP1-201ENST00000556017 CCNJLQ8IV13 435 aa14.43□□□□□ -0.1
CHMP4BP1-201ENST00000556017 NPWQ8N729 165 aa14.43□□□□□ -0.1
CHMP4BP1-201ENST00000556017 PTCD2Q8WV60 388 aaKnown RBP14.43□□□□□ -0.1
CHMP4BP1-201ENST00000556017 TAS2R14Q9NYV8 317 aa14.43□□□□□ -0.1
CHMP4BP1-201ENST00000556017 PISDQ9UG56 409 aa14.43□□□□□ -0.1
CHMP4BP1-201ENST00000556017 PRAMEF33A0A0G2JMD5 474 aa14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 CFAP69A5D8W1 941 aa14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 C9orf172C9J069 976 aa14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 FGF10O15520 208 aaPredicted RBP14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 B4GAT1O43505 415 aa14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 PRAMEF10O60809 474 aa14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 HOXC4P09017 264 aaPredicted RBP14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 PNLIPP16233 465 aa14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 GLB1P16278 677 aa14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 STAT1P42224 750 aa14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 PAPOLAP51003 745 aaKnown RBP14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 NDST2P52849 883 aa14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 B4GALNT1Q00973 533 aa14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 C16orf72Q14CZ0 275 aa14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 SYCP1Q15431 976 aa14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 ZNF574Q6ZN55 896 aaPredicted RBP14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 CBARPQ8N350 705 aaPredicted RBP14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 Q8N9G6 341 aaPredicted RBP14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 OR56A4Q8NGH8 313 aa14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 HTR3CQ8WXA8 447 aa14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 SCG3Q8WXD2 468 aaKnown RBP14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 SPOCK2Q92563 424 aa14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 EXTL1Q92935 676 aa14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 TUBGCP5Q96RT8 1024 aa14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 TRIM7Q9C029 511 aa14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 NUP62CLQ9H1M0 184 aa14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 HSD3B7Q9H2F3 369 aa14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 SEMA6CQ9H3T2 930 aa14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 CATSPERBQ9H7T0 1116 aa14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 FANCLQ9NW38 375 aa14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 DOLKQ9UPQ8 538 aa14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 LOXL2Q9Y4K0 774 aa14.42□□□□□ -0.1
CHMP4BP1-201ENST00000556017 AGRPO00253 132 aa14.41□□□□□ -0.1
CHMP4BP1-201ENST00000556017 SLC28A2O43868 658 aa14.41□□□□□ -0.1
CHMP4BP1-201ENST00000556017 TNFP01375 233 aa14.41□□□□□ -0.1
CHMP4BP1-201ENST00000556017 LIPCP11150 499 aa14.41□□□□□ -0.1
CHMP4BP1-201ENST00000556017 HTR1BP28222 390 aa14.41□□□□□ -0.1
CHMP4BP1-201ENST00000556017 COPB1P53618 953 aaKnown RBP14.41□□□□□ -0.1
CHMP4BP1-201ENST00000556017 AIF1P55008 147 aa14.41□□□□□ -0.1
CHMP4BP1-201ENST00000556017 GRM3Q14832 879 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms