RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 AREL1O15033 823 aa12.52□□□□□ -0.41
SHMT2-221ENST00000555773 TP73O15350 636 aa12.52□□□□□ -0.41
SHMT2-221ENST00000555773 TSPAN6O43657 245 aa12.52□□□□□ -0.41
SHMT2-221ENST00000555773 USP12O75317 370 aa12.52□□□□□ -0.41
SHMT2-221ENST00000555773 PPFIA2O75334 1257 aa12.52□□□□□ -0.41
SHMT2-221ENST00000555773 TMEM63AO94886 807 aa12.52□□□□□ -0.41
SHMT2-221ENST00000555773 TUBBP07437 444 aa12.52□□□□□ -0.41
SHMT2-221ENST00000555773 HNF1BP35680 557 aa12.52□□□□□ -0.41
SHMT2-221ENST00000555773 GRIA1P42261 906 aa12.52□□□□□ -0.41
SHMT2-221ENST00000555773 CHRNA4P43681 627 aa12.52□□□□□ -0.41
SHMT2-221ENST00000555773 TPMTP51580 245 aa12.52□□□□□ -0.41
SHMT2-221ENST00000555773 METAP1P53582 386 aa12.52□□□□□ -0.41
SHMT2-221ENST00000555773 TERF1P54274 439 aa12.52□□□□□ -0.41
SHMT2-221ENST00000555773 PLTPP55058 493 aa12.52□□□□□ -0.41
SHMT2-221ENST00000555773 FAM193AP78312 1265 aa12.52□□□□□ -0.41
SHMT2-221ENST00000555773 GALNT3Q14435 633 aa12.52□□□□□ -0.41
SHMT2-221ENST00000555773 PIP5KL1Q5T9C9 394 aa12.52□□□□□ -0.41
SHMT2-221ENST00000555773 AGBL4Q5VU57 503 aa12.52□□□□□ -0.41
SHMT2-221ENST00000555773 NEK5Q6P3R8 708 aa12.52□□□□□ -0.41
SHMT2-221ENST00000555773 CAND1Q86VP6 1230 aaKnown RBP12.52□□□□□ -0.41
SHMT2-221ENST00000555773 RAVER1Q8IY67 606 aaKnown RBP12.52□□□□□ -0.41
SHMT2-221ENST00000555773 PDIK1LQ8N165 341 aa12.52□□□□□ -0.41
SHMT2-221ENST00000555773 BRSK1Q8TDC3 778 aa12.52□□□□□ -0.41
SHMT2-221ENST00000555773 HINFPQ9BQA5 517 aa12.52□□□□□ -0.41
SHMT2-221ENST00000555773 C1QTNF1Q9BXJ1 281 aa12.52□□□□□ -0.41
SHMT2-221ENST00000555773 FAM126AQ9BYI3 521 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-221ENST00000555773 IL22Q9GZX6 179 aa12.52□□□□□ -0.41
SHMT2-221ENST00000555773 BTBD1Q9H0C5 482 aa12.52□□□□□ -0.41
SHMT2-221ENST00000555773 TSPYL1Q9H0U9 437 aa12.52□□□□□ -0.41
SHMT2-221ENST00000555773 PCDH12Q9NPG4 1184 aa12.52□□□□□ -0.41
SHMT2-221ENST00000555773 FADS3Q9Y5Q0 445 aa12.52□□□□□ -0.41
SHMT2-221ENST00000555773 ESYT3A0FGR9 886 aa12.51□□□□□ -0.41
SHMT2-221ENST00000555773 CAPN8A6NHC0 703 aa12.51□□□□□ -0.41
SHMT2-221ENST00000555773 SDR42E2A6NKP2 422 aa12.51□□□□□ -0.41
SHMT2-221ENST00000555773 H0Y858 1186 aa12.51□□□□□ -0.41
SHMT2-221ENST00000555773 NEMP1O14524 444 aa12.51□□□□□ -0.41
SHMT2-221ENST00000555773 AXIN1O15169 862 aa12.51□□□□□ -0.41
SHMT2-221ENST00000555773 PLRG1O43660 514 aaKnown RBP12.51□□□□□ -0.41
SHMT2-221ENST00000555773 CRTAMO95727 393 aa12.51□□□□□ -0.41
SHMT2-221ENST00000555773 ZNF30P17039 623 aa12.51□□□□□ -0.41
SHMT2-221ENST00000555773 MCM3P25205 808 aa12.51□□□□□ -0.41
SHMT2-221ENST00000555773 VIPR1P32241 457 aa12.51□□□□□ -0.41
SHMT2-221ENST00000555773 ABL2P42684 1182 aa12.51□□□□□ -0.41
SHMT2-221ENST00000555773 MAGEA3P43357 314 aa12.51□□□□□ -0.41
SHMT2-221ENST00000555773 ARL4CP56559 192 aa12.51□□□□□ -0.41
SHMT2-221ENST00000555773 PDE1BQ01064 536 aa12.51□□□□□ -0.41
SHMT2-221ENST00000555773 MSLNQ13421 630 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-221ENST00000555773 OLIG2Q13516 323 aa12.51□□□□□ -0.41
SHMT2-221ENST00000555773 TRADDQ15628 312 aa12.51□□□□□ -0.41
SHMT2-221ENST00000555773 TMEM52BQ4KMG9 183 aa12.51□□□□□ -0.41
SHMT2-221ENST00000555773 USP39Q53GS9 565 aaKnown RBP12.51□□□□□ -0.41
SHMT2-221ENST00000555773 DNAJC21Q5F1R6 531 aaKnown RBP12.51□□□□□ -0.41
SHMT2-221ENST00000555773 CEP128Q6ZU80 1094 aa12.51□□□□□ -0.41
SHMT2-221ENST00000555773 ZNF534Q76KX8 674 aa12.51□□□□□ -0.41
SHMT2-221ENST00000555773 DPPA4Q7L190 304 aa12.51□□□□□ -0.41
SHMT2-221ENST00000555773 ZCCHC9Q8N567 271 aaKnown RBP12.51□□□□□ -0.41
SHMT2-221ENST00000555773 IFT81Q8WYA0 676 aa12.51□□□□□ -0.41
SHMT2-221ENST00000555773 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.51□□□□□ -0.41
SHMT2-221ENST00000555773 SERPINB12Q96P63 405 aa12.51□□□□□ -0.41
SHMT2-221ENST00000555773 C19orf43Q9BQ61 176 aa12.51□□□□□ -0.41
SHMT2-221ENST00000555773 PREBQ9HCU5 417 aa12.51□□□□□ -0.41
SHMT2-221ENST00000555773 SERGEFQ9UGK8 458 aa12.51□□□□□ -0.41
SHMT2-221ENST00000555773 LRRC72A6NJI9 287 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 C2orf81A6NN90 581 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 GOLGA8MH3BSY2 632 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 PLK4O00444 970 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 EIF3HO15372 352 aaKnown RBP eCLIP12.5□□□□□ -0.41
SHMT2-221ENST00000555773 TDGF1P13385 188 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 TPH1P17752 444 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 CTPS1P17812 591 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 ADRA1DP25100 572 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 CD6P30203 668 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 MMP12P39900 470 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 CARSP49589 748 aaKnown RBP12.5□□□□□ -0.41
SHMT2-221ENST00000555773 SESN2P58004 480 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-221ENST00000555773 TAS2R38P59533 333 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 CSTF1Q05048 431 aaKnown RBP12.5□□□□□ -0.41
SHMT2-221ENST00000555773 ARHGEF7Q14155 803 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 HIF1AQ16665 826 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 CDKN3Q16667 212 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 ZNF528Q3MIS6 628 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 PCID2Q5JVF3 399 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 TMEM31Q5JXX7 168 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 CRTC1Q6UUV9 634 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 ZDHHC24Q6UX98 284 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 NLRP9Q7RTR0 991 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 TMC3Q7Z5M5 1100 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 WDR5BQ86VZ2 330 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 LONP2Q86WA8 852 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 CACUL1Q86Y37 369 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 CCNJLQ8IV13 435 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 MAML2Q8IZL2 1156 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-221ENST00000555773 CBARPQ8N350 705 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-221ENST00000555773 GPR161Q8N6U8 529 aaKnown RBP12.5□□□□□ -0.41
SHMT2-221ENST00000555773 OR2T34Q8NGX1 318 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 OR14C36Q8NHC7 312 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 FBXO25Q8TCJ0 367 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 BLOC1S5Q8TDH9 187 aa12.5□□□□□ -0.41
SHMT2-221ENST00000555773 PTCD2Q8WV60 388 aaKnown RBP12.5□□□□□ -0.41
SHMT2-221ENST00000555773 LRRC39Q96DD0 335 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms