RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 RBBP6Q7Z6E9 1792 aaKnown RBP3.56□□□□□ -1.84
SRP54-209ENST00000555746 ALS2Q96Q42 1657 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 KDM6AO15550 1401 aaPredicted RBP3.55□□□□□ -1.84
SRP54-209ENST00000555746 CASKIN1Q8WXD9 1431 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 CCNB3Q8WWL7 1395 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 ANKRD30BQ9BXX2 1392 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 DICER1Q9UPY3 1922 aaKnown RBP3.55□□□□□ -1.84
SRP54-209ENST00000555746 A0A087X0M5 115 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 LY6G6EA0A0G2JKS1 128 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 A0A1B0GX30 115 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 A0A1W2PPC1 479 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 A0A1W2PPH5 198 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 EBAG9O00559 213 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 RTN3O95197 1032 aaPredicted RBP3.55□□□□□ -1.84
SRP54-209ENST00000555746 EPN2O95208 641 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 KLKB1P03952 638 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 CHRNB1P11230 501 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 CYP19A1P11511 503 aaPredicted RBP3.55□□□□□ -1.84
SRP54-209ENST00000555746 PRF1P14222 555 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 TNFSF8P32971 234 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 GPR12P47775 334 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 ALDH7A1P49419 539 aaKnown RBP3.55□□□□□ -1.84
SRP54-209ENST00000555746 RASSF2P50749 326 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 MRPS21P82921 87 aaKnown RBP3.55□□□□□ -1.84
SRP54-209ENST00000555746 SLC18A2Q05940 514 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 KLF9Q13886 244 aaPredicted RBP3.55□□□□□ -1.84
SRP54-209ENST00000555746 TWIST1Q15672 202 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 FAAH2Q6GMR7 532 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 NCAPH2Q6IBW4 605 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 SHC4Q6S5L8 630 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 KRBA2Q6ZNG9 492 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 FAM83HQ6ZRV2 1179 aaPredicted RBP3.55□□□□□ -1.84
SRP54-209ENST00000555746 C1orf122Q6ZSJ8 110 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 B4GALNT4Q76KP1 1039 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 MAATS1Q7Z4T9 603 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 R3HCC1LQ7Z5L2 792 aaKnown RBP3.55□□□□□ -1.84
SRP54-209ENST00000555746 MRPL10Q7Z7H8 261 aaKnown RBP3.55□□□□□ -1.84
SRP54-209ENST00000555746 FAM160B2Q86V87 743 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 GPSM1Q86YR5 675 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 TDRD7Q8NHU6 1098 aaKnown RBP3.55□□□□□ -1.84
SRP54-209ENST00000555746 DENND1AQ8TEH3 1009 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 HDAC2Q92769 488 aaKnown RBP3.55□□□□□ -1.84
SRP54-209ENST00000555746 C1QTNF7Q9BXJ2 289 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 B3GNT4Q9C0J1 378 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 PRO3102Q9H379 93 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 KLHL31Q9H511 634 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 SLC32A1Q9H598 525 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 VEZTQ9HBM0 779 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 WDR6Q9NNW5 1121 aaKnown RBP3.55□□□□□ -1.84
SRP54-209ENST00000555746 KIAA1456Q9P272 454 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 HSPB7Q9UBY9 170 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 ZNF70Q9UC06 446 aaPredicted RBP3.55□□□□□ -1.84
SRP54-209ENST00000555746 CDH22Q9UJ99 828 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 ABT1Q9ULW3 272 aaKnown RBP3.55□□□□□ -1.84
SRP54-209ENST00000555746 HS3ST3B1Q9Y662 390 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 FASNP49327 2511 aaKnown RBP3.55□□□□□ -1.84
SRP54-209ENST00000555746 SCN4AP35499 1836 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 TRANK1O15050 2925 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 BDP1A6H8Y1 2624 aa3.55□□□□□ -1.84
SRP54-209ENST00000555746 EEA1Q15075 1411 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 ERBINQ96RT1 1412 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 A0A096LPK6 155 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 DNAJC9-AS1A6NH13 148 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 DDTLA6NHG4 134 aaPredicted RBP3.54□□□□□ -1.84
SRP54-209ENST00000555746 H0YGN5 161 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 HSPB6O14558 160 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 MOSPD3O75425 235 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 DDX58O95786 925 aaKnown RBP3.54□□□□□ -1.84
SRP54-209ENST00000555746 MMP3P08254 477 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 PTPN2P17706 415 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 CTPS1P17812 591 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 TNFRSF1BP20333 461 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 CAPN3P20807 821 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 FMO4P31512 558 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 ABCD1P33897 745 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 MAN1A1P33908 653 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 TTKP33981 857 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 RYKP34925 604 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 PTGER1P34995 402 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 DEKP35659 375 aaKnown RBP3.54□□□□□ -1.84
SRP54-209ENST00000555746 ABCG1P45844 678 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 GEMIN4P57678 1058 aaKnown RBP3.54□□□□□ -1.84
SRP54-209ENST00000555746 YWHAZP63104 245 aaKnown RBP3.54□□□□□ -1.84
SRP54-209ENST00000555746 GAD2Q05329 585 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 MYBPC2Q14324 1141 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 TSTQ16762 297 aaKnown RBP3.54□□□□□ -1.84
SRP54-209ENST00000555746 EDRF1Q3B7T1 1238 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 SLC9B1Q4ZJI4 515 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 Q5PR19 223 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 SERTAD4-AS1Q5TG53 156 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 PXDC1Q5TGL8 231 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 ATG9BQ674R7 924 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 HMBOX1Q6NT76 420 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 C11orf87Q6NUJ2 197 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 FAM180BQ6P0A1 224 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 RRM2BQ7LG56 351 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 C1QL2Q7Z5L3 287 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 TBC1D1Q86TI0 1168 aaPredicted RBP3.54□□□□□ -1.84
SRP54-209ENST00000555746 TADA2BQ86TJ2 420 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 MMP21Q8N119 569 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms