RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 ERI2A8K979 691 aaKnown RBP17.51■□□□□ 0.39
SHOX-204ENST00000554971 H0Y626 953 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 M0R296 226 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 EEF2KO00418 725 aaKnown RBP17.51■□□□□ 0.39
SHOX-204ENST00000554971 CHRNB1P11230 501 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 RHOQP17081 205 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 CALB2P22676 271 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 MZF1P28698 734 aaPredicted RBP17.51■□□□□ 0.39
SHOX-204ENST00000554971 TPI1P60174 286 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 ZBTB16Q05516 673 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 GRAMD4Q6IC98 578 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 ADIPOR2Q86V24 386 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 NUDCD3Q8IVD9 361 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 ALG14Q96F25 216 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 SHDQ96IW2 340 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 TMEM120AQ9BXJ8 343 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 NOL6Q9H6R4 1146 aaKnown RBP17.51■□□□□ 0.39
SHOX-204ENST00000554971 DCTN4Q9UJW0 460 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 A0A0D9SEW6 157 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 VGLL3A8MV65 326 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 AP3B1O00203 1094 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 ANP32DO95626 131 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 VAV1P15498 845 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 GRIA2P42262 883 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 TBCCQ15814 346 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 FUT11Q495W5 492 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 SYCP2LQ5T4T6 812 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 NDUFAF2Q8N183 169 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 RTL3Q8N8U3 475 aaKnown RBP17.51■□□□□ 0.39
SHOX-204ENST00000554971 PJA1Q8NG27 643 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 GIMAP7Q8NHV1 300 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 MMADHCQ9H3L0 296 aaPredicted RBP17.51■□□□□ 0.39
SHOX-204ENST00000554971 DCDC2Q9UHG0 476 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.51■□□□□ 0.39
SHOX-204ENST00000554971 OR51B4Q9Y5P0 310 aa17.51■□□□□ 0.39
SHOX-204ENST00000554971 LAMA1P25391 3075 aa17.5■□□□□ 0.39
SHOX-204ENST00000554971 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.5■□□□□ 0.39
SHOX-204ENST00000554971 RNF103O00237 685 aa17.5■□□□□ 0.39
SHOX-204ENST00000554971 HGSO14964 777 aaPredicted RBP17.5■□□□□ 0.39
SHOX-204ENST00000554971 PI15O43692 258 aa17.5■□□□□ 0.39
SHOX-204ENST00000554971 MAP3K6O95382 1288 aa17.5■□□□□ 0.39
SHOX-204ENST00000554971 BPGMP07738 259 aa17.5■□□□□ 0.39
SHOX-204ENST00000554971 ERCC2P18074 760 aa17.5■□□□□ 0.39
SHOX-204ENST00000554971 OR1E1P30953 314 aa17.5■□□□□ 0.39
SHOX-204ENST00000554971 OCRLQ01968 901 aa17.5■□□□□ 0.39
SHOX-204ENST00000554971 NIPAL4Q0D2K0 466 aa17.5■□□□□ 0.39
SHOX-204ENST00000554971 UBXN2BQ14CS0 331 aa17.5■□□□□ 0.39
SHOX-204ENST00000554971 E2F5Q15329 346 aa17.5■□□□□ 0.39
SHOX-204ENST00000554971 CDHR3Q6ZTQ4 885 aa17.5■□□□□ 0.39
SHOX-204ENST00000554971 LONP2Q86WA8 852 aa17.5■□□□□ 0.39
SHOX-204ENST00000554971 APCDD1Q8J025 514 aa17.5■□□□□ 0.39
SHOX-204ENST00000554971 NPWQ8N729 165 aa17.5■□□□□ 0.39
SHOX-204ENST00000554971 PTCD3Q96EY7 689 aaKnown RBP17.5■□□□□ 0.39
SHOX-204ENST00000554971 RSRC1Q96IZ7 334 aaKnown RBP17.5■□□□□ 0.39
SHOX-204ENST00000554971 BTBD10Q9BSF8 475 aa17.5■□□□□ 0.39
SHOX-204ENST00000554971 WWP1Q9H0M0 922 aa17.5■□□□□ 0.39
SHOX-204ENST00000554971 C12orf65Q9H3J6 166 aaKnown RBP17.5■□□□□ 0.39
SHOX-204ENST00000554971 FAM96AQ9H5X1 160 aa17.5■□□□□ 0.39
SHOX-204ENST00000554971 ZDHHC4Q9NPG8 344 aa17.5■□□□□ 0.39
SHOX-204ENST00000554971 C15orf41Q9Y2V0 281 aa17.5■□□□□ 0.39
SHOX-204ENST00000554971 CKAP5Q14008 2032 aa17.5■□□□□ 0.39
SHOX-204ENST00000554971 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.49■□□□□ 0.39
SHOX-204ENST00000554971 TBC1D3BA6NDS4 549 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 FAM170BA6NMN3 283 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 WASH4PA8MWX3 477 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 DCLK1O15075 740 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 MFSD11O43934 449 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 SNNO75324 88 aaPredicted RBP17.49■□□□□ 0.39
SHOX-204ENST00000554971 PABPC1P11940 636 aaKnown RBP17.49■□□□□ 0.39
SHOX-204ENST00000554971 MX2P20592 715 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 DRD1P21728 446 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 HTR7P34969 479 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 CSKP41240 450 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 TMPRSS15P98073 1019 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 GRSF1Q12849 480 aaKnown RBP eCLIP17.49■□□□□ 0.39
SHOX-204ENST00000554971 OVGP1Q12889 678 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 ZNF177Q13360 481 aaPredicted RBP17.49■□□□□ 0.39
SHOX-204ENST00000554971 GAS6Q14393 721 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 SPANXN3Q5MJ09 141 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 TRMT10BQ6PF06 316 aaKnown RBP17.49■□□□□ 0.39
SHOX-204ENST00000554971 Q6ZS52 159 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 CRLF3Q8IUI8 442 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 NETO2Q8NC67 525 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 FLCNQ8NFG4 579 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 SORCS1Q8WY21 1168 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 VAT1Q99536 393 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 LGMNQ99538 433 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 FEM1AQ9BSK4 669 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 STN1Q9H668 368 aaKnown RBP17.49■□□□□ 0.39
SHOX-204ENST00000554971 THAP1Q9NVV9 213 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 TRHDEQ9UKU6 1024 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 DNAH14Q0VDD8 3507 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 MAGEB16A2A368 324 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 HMX2A2RU54 273 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 FGF10O15520 208 aaPredicted RBP17.49■□□□□ 0.39
SHOX-204ENST00000554971 GLRA3O75311 464 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 CBX6O95503 412 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 APODP05090 189 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 POLBP06746 335 aa17.49■□□□□ 0.39
SHOX-204ENST00000554971 KIR2DL1P43626 348 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms