RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 MYRIPQ8NFW9 859 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 ATXN7L3BQ96GX2 97 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 EXOC2Q96KP1 924 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 GDAP1L1Q96MZ0 367 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 ZNF578Q96N58 590 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-215ENST00000554656 LGMNQ99538 433 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 EPAS1Q99814 870 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 WRAP53Q9BUR4 548 aaKnown RBP10.68□□□□□ -0.7
SHMT2-215ENST00000554656 OSBPL1AQ9BXW6 950 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 POLR1BQ9H9Y6 1135 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 ADAM22Q9P0K1 906 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 APOBEC3BQ9UH17 382 aaKnown RBP10.68□□□□□ -0.7
SHMT2-215ENST00000554656 IPO11Q9UI26 975 aaKnown RBP10.68□□□□□ -0.7
SHMT2-215ENST00000554656 LCMT1Q9UIC8 334 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 SALL4Q9UJQ4 1053 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 CDC23Q9UJX2 597 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 HPCAL4Q9UM19 191 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 MFHAS1Q9Y4C4 1052 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 ENTPD2Q9Y5L3 495 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 MRFAP1Q9Y605 127 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 CAPN6Q9Y6Q1 641 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 TENM4Q6N022 2769 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 ARHGEF17Q96PE2 2063 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-215ENST00000554656 TSPAN11A1L157 253 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 ZSCAN5CA6NGD5 496 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-215ENST00000554656 SIGLEC16A6NMB1 481 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 EIF4E1BA6NMX2 242 aaKnown RBP10.67□□□□□ -0.7
SHMT2-215ENST00000554656 WASH4PA8MWX3 477 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 RASA4BC9J798 803 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 LMO7DNF2Z398 122 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 RIOK3O14730 519 aaKnown RBP10.67□□□□□ -0.7
SHMT2-215ENST00000554656 TPP1O14773 563 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 MUSKO15146 869 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 RASA4O43374 803 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 URI1O94763 535 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-215ENST00000554656 ZIC2O95409 532 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-215ENST00000554656 IGSF6O95976 241 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 CYP1A2P05177 515 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 CALB1P05937 261 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 TCP1P17987 556 aaKnown RBP10.67□□□□□ -0.7
SHMT2-215ENST00000554656 EPHB2P29323 1055 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 NSFP46459 744 aaKnown RBP10.67□□□□□ -0.7
SHMT2-215ENST00000554656 RGRP47804 291 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 NAP1L1P55209 391 aaKnown RBP10.67□□□□□ -0.7
SHMT2-215ENST00000554656 PCBP4P57723 403 aaKnown RBP10.67□□□□□ -0.7
SHMT2-215ENST00000554656 CXADRP78310 365 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 SKOR1P84550 965 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 CYTH1Q15438 398 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 NR0B2Q15466 257 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 WHAMMP3Q1A5X7 153 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 WSCD2Q2TBF2 565 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 C3orf38Q5JPI3 329 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 C11orf63Q6NUN7 778 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 MACC1Q6ZN28 852 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 GPR155Q7Z3F1 870 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 TTC7BQ86TV6 843 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 ZSWIM9Q86XI8 627 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 MCOLN2Q8IZK6 566 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 LRRC57Q8N9N7 239 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 ZNF248Q8NDW4 579 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 TPCN2Q8NHX9 752 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 TBATAQ96M53 351 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 MCEEQ96PE7 176 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 SELENOOQ9BVL4 669 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 PDFQ9HBH1 243 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 CPNE5Q9HCH3 593 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 GPATCH2LQ9NWQ4 482 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 TAS2R14Q9NYV8 317 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 SPASTQ9UBP0 616 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 DKK3Q9UBP4 350 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 FZD10Q9ULW2 581 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 TFR2Q9UP52 801 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 SATB2Q9UPW6 733 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 SCINQ9Y6U3 715 aa10.67□□□□□ -0.7
SHMT2-215ENST00000554656 UNC13CQ8NB66 2214 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 GRID2IPA4D2P6 1211 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 TMCO5BA8MYB1 307 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 J3KR12 359 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 TK2O00142 265 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 CES2O00748 559 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 CREB3O43889 395 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 BUB1BO60566 1050 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-215ENST00000554656 TM7SF2O76062 418 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 SLU7O95391 586 aaKnown RBP10.66□□□□□ -0.7
SHMT2-215ENST00000554656 TSHRP16473 764 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 NOP2P46087 812 aaKnown RBP10.66□□□□□ -0.7
SHMT2-215ENST00000554656 ZNF143P52747 638 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-215ENST00000554656 THOP1P52888 689 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 YBEYP58557 167 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-215ENST00000554656 ERVPABLB-1P60509 514 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 RHOAP61586 193 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 TCEA2Q15560 299 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 ALG11Q2TAA5 492 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 TMEM52BQ4KMG9 183 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 INO80DQ53TQ3 878 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-215ENST00000554656 EFHC2Q5JST6 749 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 C6orf132Q5T0Z8 1188 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 MEI1Q5TIA1 1274 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 DNAJC24Q6P3W2 148 aa10.66□□□□□ -0.7
SHMT2-215ENST00000554656 SCYL2Q6P3W7 929 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms