RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 CAPNS1P04632 268 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 GIMD1P0DJR0 217 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 C6P13671 934 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 CR2P20023 1033 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 IL4RP24394 825 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 HNF1BP35680 557 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 PEX5P50542 639 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 THOP1P52888 689 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 SLC10A7Q0GE19 358 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 DNAJC3Q13217 504 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 DPYSL3Q14195 570 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 LRRC14Q15048 493 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 PAFAH1B3Q15102 231 aaKnown RBP10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 SARM1Q6SZW1 724 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 DHRS13Q6UX07 377 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 MACC1Q6ZN28 852 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 LURAP1LQ8IV03 231 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 MAP7D3Q8IWC1 876 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 TP53INP2Q8IXH6 220 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 RHOT2Q8IXI1 618 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 CACTIN-AS1Q8N1I8 211 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 FAM181AQ8N9Y4 354 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 NSMCE1Q8WV22 266 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 BTN2A2Q8WVV5 523 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 RFFLQ8WZ73 363 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 FATE1Q969F0 183 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 FAF2Q96CS3 445 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 KCTD12Q96CX2 325 aaKnown RBP10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 NUDCD1Q96RS6 583 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 MGME1Q9BQP7 344 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 WRAP53Q9BUR4 548 aaKnown RBP10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 PACSIN1Q9BY11 444 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 EVA1BQ9NVM1 165 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 UCKL1Q9NWZ5 548 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 DNAJC28Q9NX36 388 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 NCKIPSDQ9NZQ3 722 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 DKK4Q9UBT3 224 aa10.48□□□□□ -0.73
PTCD2P1-201ENST00000554393 LAMA5O15230 3695 aa10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 TMEM110-MUSTN1A8MSY1 372 aa10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 ZNF487B1APH4 448 aa10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 TPP1O14773 563 aa10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 MUSKO15146 869 aa10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 HTRA2O43464 458 aaPredicted RBP10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 MTA2O94776 668 aa10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 CKMT1AP12532 417 aa10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 ITIH2P19823 946 aa10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 NFKBIAP25963 317 aa10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 ARHGAP25P42331 645 aa10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 SSR1P43307 286 aaKnown RBP10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 SCNN1BP51168 640 aa10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 E2F1Q01094 437 aa10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 GALNT2Q10471 571 aa10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 MTM1Q13496 603 aa10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 IRF4Q15306 451 aa10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 WSCD2Q2TBF2 565 aa10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 MARC1Q5VT66 337 aa10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 DPPA4Q7L190 304 aa10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 ZSWIM9Q86XI8 627 aa10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 VSIG1Q86XK7 387 aa10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 TEX26Q8N6G2 289 aa10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 RNF214Q8ND24 703 aa10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 ZNF548Q8NEK5 533 aaPredicted RBP10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 RNF166Q96A37 237 aaPredicted RBP10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 CCDC42Q96M95 316 aa10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 NHEJ1Q9H9Q4 299 aaPredicted RBP10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 MBNL1Q9NR56 388 aaKnown RBP10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 HAUS2Q9NVX0 235 aa10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 KCTD5Q9NXV2 234 aa10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 AMACRQ9UHK6 382 aa10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 INTUQ9ULD6 942 aa10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 FREM2Q5SZK8 3169 aa10.47□□□□□ -0.73
PTCD2P1-201ENST00000554393 ASXL3Q9C0F0 2248 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 DMXL2Q8TDJ6 3036 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 SRRM3A6NNA2 597 aaPredicted RBP10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 AQP9O43315 295 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 MFSD11O43934 449 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 GP1BAP07359 652 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 CD48P09326 243 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 ELFN1P0C7U0 828 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 JUNDP17535 347 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 GARSP41250 739 aaKnown RBP10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 MMP13P45452 471 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 LIG3P49916 1009 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 BLKP51451 505 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 DUSP3P51452 185 aaPredicted RBP10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 ADKP55263 362 aaKnown RBP10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 DAB2P98082 770 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 RALGDSQ12967 914 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 EIF2B5Q13144 721 aaKnown RBP10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 TBX2Q13207 712 aaPredicted RBP10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 TCEAL1Q15170 157 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 CCDC157Q569K6 752 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 ANKRD20A8PQ5CZ79 823 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 TPRG1LQ5T0D9 272 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 NCBP2-AS2Q69YL0 99 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 ALG1LQ6GMV1 187 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 TIGD7Q6NT04 549 aaPredicted RBP10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 ZCCHC8Q6NZY4 707 aaKnown RBP10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 THSD4Q6ZMP0 1018 aa10.46□□□□□ -0.73
PTCD2P1-201ENST00000554393 PROSER1Q86XN7 944 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms