RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 USP13Q92995 863 aaPredicted RBP5.1□□□□□ -1.59
VTI1B-202ENST00000553619 FATE1Q969F0 183 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 IGSF8Q969P0 613 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 RTP4Q96DX8 246 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 SNF8Q96H20 258 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 ZNF599Q96NL3 588 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 SLC22A12Q96S37 553 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 NOTCH4Q99466 2003 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 HERPUD2Q9BSE4 406 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 SLC39A8Q9C0K1 460 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 KLC2Q9H0B6 622 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 PCDH9Q9HC56 1237 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 ANLNQ9NQW6 1124 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 GDF3Q9NR23 364 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 SPHK2Q9NRA0 654 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 ETNK2Q9NVF9 386 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 DUS2Q9NX74 493 aaKnown RBP5.1□□□□□ -1.59
VTI1B-202ENST00000553619 SAE1Q9UBE0 346 aaPredicted RBP5.1□□□□□ -1.59
VTI1B-202ENST00000553619 IPO11Q9UI26 975 aaKnown RBP5.1□□□□□ -1.59
VTI1B-202ENST00000553619 XPO7Q9UIA9 1087 aaKnown RBP5.1□□□□□ -1.59
VTI1B-202ENST00000553619 GPR160Q9UJ42 338 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 CD207Q9UJ71 328 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 ANAPC5Q9UJX4 755 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 RAB21Q9UL25 225 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 SLC8A2Q9UPR5 921 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 TBC1D30Q9Y2I9 924 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 R3HDM2Q9Y2K5 976 aaKnown RBP5.1□□□□□ -1.59
VTI1B-202ENST00000553619 POLR3KQ9Y2Y1 108 aaPredicted RBP5.1□□□□□ -1.59
VTI1B-202ENST00000553619 AAR2Q9Y312 384 aaKnown RBP5.1□□□□□ -1.59
VTI1B-202ENST00000553619 PCDHB14Q9Y5E9 798 aa5.1□□□□□ -1.59
VTI1B-202ENST00000553619 PDE4DIPQ5VU43 2346 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 MYO18AQ92614 2054 aaKnown RBP5.09□□□□□ -1.59
VTI1B-202ENST00000553619 HELZP42694 1942 aaKnown RBP5.09□□□□□ -1.59
VTI1B-202ENST00000553619 NUP210Q8TEM1 1887 aaPredicted RBP5.09□□□□□ -1.59
VTI1B-202ENST00000553619 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.09□□□□□ -1.59
VTI1B-202ENST00000553619 ERI2A8K979 691 aaKnown RBP5.09□□□□□ -1.59
VTI1B-202ENST00000553619 HEPACAM2A8MVW5 462 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 I6L893 689 aaPredicted RBP5.09□□□□□ -1.59
VTI1B-202ENST00000553619 DNALI1O14645 258 aaPredicted RBP5.09□□□□□ -1.59
VTI1B-202ENST00000553619 RGS13O14921 159 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 CHADO15335 359 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 EIF3HO15372 352 aaKnown RBP eCLIP5.09□□□□□ -1.59
VTI1B-202ENST00000553619 LINC01565O15544 149 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 ATP8B1O43520 1251 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 TIMM44O43615 452 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 KDELR3O43731 214 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 MFSD11O43934 449 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 GREM1O60565 184 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 MAFKO60675 156 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 ECI2O75521 394 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 CLEC3AO75596 197 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 ANXA9O76027 345 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 CNTN5O94779 1100 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 LUC7L3O95232 432 aaKnown RBP5.09□□□□□ -1.59
VTI1B-202ENST00000553619 GLP2RO95838 553 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 INHBBP09529 407 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 LAMP2P13473 410 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 CCNB1P14635 433 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 PECAM1P16284 738 aaPredicted RBP5.09□□□□□ -1.59
VTI1B-202ENST00000553619 CEBPBP17676 345 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 PSMC3P17980 439 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 ENDOUP21128 410 aaKnown RBP5.09□□□□□ -1.59
VTI1B-202ENST00000553619 SLC6A4P31645 630 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 RPL22P35268 128 aaKnown RBP5.09□□□□□ -1.59
VTI1B-202ENST00000553619 HSPA9P38646 679 aaKnown RBP5.09□□□□□ -1.59
VTI1B-202ENST00000553619 PAPOLAP51003 745 aaKnown RBP5.09□□□□□ -1.59
VTI1B-202ENST00000553619 PLK1P53350 603 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 GEMP55040 296 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 PCBP3P57721 371 aaKnown RBP5.09□□□□□ -1.59
VTI1B-202ENST00000553619 SLC7A5Q01650 507 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 TAGLNQ01995 201 aaKnown RBP5.09□□□□□ -1.59
VTI1B-202ENST00000553619 GBE1Q04446 702 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 GPS1Q13098 491 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 SERINC3Q13530 473 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 SLMAPQ14BN4 828 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 MORF4L2Q15014 288 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 PRKD1Q15139 912 aaPredicted RBP5.09□□□□□ -1.59
VTI1B-202ENST00000553619 ELF2Q15723 593 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 ZNF77Q15935 545 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 SLC5A9Q2M3M2 681 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 ALFQ53S48 1182 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 INO80DQ53TQ3 878 aaPredicted RBP5.09□□□□□ -1.59
VTI1B-202ENST00000553619 FAM78AQ5JUQ0 283 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 STXBP5Q5T5C0 1151 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 RNF219Q5W0B1 726 aaPredicted RBP5.09□□□□□ -1.59
VTI1B-202ENST00000553619 AFMIDQ63HM1 303 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 RETSATQ6NUM9 610 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 TTC27Q6P3X3 843 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 EMBQ6PCB8 327 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 TPGS1Q6ZTW0 290 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 GET4Q7L5D6 327 aaPredicted RBP5.09□□□□□ -1.59
VTI1B-202ENST00000553619 ERMP1Q7Z2K6 904 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 LINC00523Q86TU6 105 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 HOOK3Q86VS8 718 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 BBS7Q8IWZ6 715 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 PPIL6Q8IXY8 311 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 CNPY4Q8N129 248 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 CFAP52Q8N1V2 620 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 FAM71DQ8N9W8 422 aa5.09□□□□□ -1.59
VTI1B-202ENST00000553619 WFIKKN2Q8TEU8 576 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms