RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 HSD11B1LQ7Z5J1 315 aa18.31■□□□□ 0.52
SHMT2-206ENST00000553529 HID1Q8IV36 788 aa18.31■□□□□ 0.52
SHMT2-206ENST00000553529 LZTR1Q8N653 840 aa18.31■□□□□ 0.52
SHMT2-206ENST00000553529 PAF1Q8N7H5 531 aa18.31■□□□□ 0.52
SHMT2-206ENST00000553529 KCTD6Q8NC69 237 aa18.31■□□□□ 0.52
SHMT2-206ENST00000553529 CTNNBL1Q8WYA6 563 aaPredicted RBP18.31■□□□□ 0.52
SHMT2-206ENST00000553529 IQCDQ96DY2 449 aa18.31■□□□□ 0.52
SHMT2-206ENST00000553529 NUDCD1Q96RS6 583 aa18.31■□□□□ 0.52
SHMT2-206ENST00000553529 CEP41Q9BYV8 373 aa18.31■□□□□ 0.52
SHMT2-206ENST00000553529 DEF6Q9H4E7 631 aa18.31■□□□□ 0.52
SHMT2-206ENST00000553529 CCDC86Q9H6F5 360 aaKnown RBP18.31■□□□□ 0.52
SHMT2-206ENST00000553529 SUDS3Q9H7L9 328 aaPredicted RBP18.31■□□□□ 0.52
SHMT2-206ENST00000553529 NLGN3Q9NZ94 848 aa18.31■□□□□ 0.52
SHMT2-206ENST00000553529 TMEM8BA6NDV4 472 aa18.3■□□□□ 0.52
SHMT2-206ENST00000553529 TMEM202A6NGA9 273 aa18.3■□□□□ 0.52
SHMT2-206ENST00000553529 CKMT1AP12532 417 aa18.3■□□□□ 0.52
SHMT2-206ENST00000553529 JUPP14923 745 aa18.3■□□□□ 0.52
SHMT2-206ENST00000553529 GARSP41250 739 aaKnown RBP18.3■□□□□ 0.52
SHMT2-206ENST00000553529 AP1S1P61966 158 aa18.3■□□□□ 0.52
SHMT2-206ENST00000553529 HNRNPKP61978 463 aaKnown RBP eCLIP18.3■□□□□ 0.52
SHMT2-206ENST00000553529 NSUN2Q08J23 767 aaKnown RBP eCLIP18.3■□□□□ 0.52
SHMT2-206ENST00000553529 GALNT2Q10471 571 aa18.3■□□□□ 0.52
SHMT2-206ENST00000553529 RFTN1Q14699 578 aaPredicted RBP18.3■□□□□ 0.52
SHMT2-206ENST00000553529 FAXCQ5TGI0 409 aa18.3■□□□□ 0.52
SHMT2-206ENST00000553529 ERAP2Q6P179 960 aa18.3■□□□□ 0.52
SHMT2-206ENST00000553529 ENPP7Q6UWV6 458 aa18.3■□□□□ 0.52
SHMT2-206ENST00000553529 MACC1Q6ZN28 852 aa18.3■□□□□ 0.52
SHMT2-206ENST00000553529 GALNT15Q8N3T1 639 aa18.3■□□□□ 0.52
SHMT2-206ENST00000553529 CCL4L1Q8NHW4 92 aa18.3■□□□□ 0.52
SHMT2-206ENST00000553529 OR1E3Q8WZA6 343 aa18.3■□□□□ 0.52
SHMT2-206ENST00000553529 APOOQ9BUR5 198 aa18.3■□□□□ 0.52
SHMT2-206ENST00000553529 BRD8Q9H0E9 1235 aa18.3■□□□□ 0.52
SHMT2-206ENST00000553529 SIRPGQ9P1W8 387 aa18.3■□□□□ 0.52
SHMT2-206ENST00000553529 GOLGA4Q13439 2230 aaKnown RBP18.3■□□□□ 0.52
SHMT2-206ENST00000553529 SSU72P8A0A1W2PR75 194 aa18.29■□□□□ 0.52
SHMT2-206ENST00000553529 CPED1A4D0V7 1026 aa18.29■□□□□ 0.52
SHMT2-206ENST00000553529 C3orf70A6NLC5 250 aaPredicted RBP18.29■□□□□ 0.52
SHMT2-206ENST00000553529 HTRA2O43464 458 aaPredicted RBP18.29■□□□□ 0.52
SHMT2-206ENST00000553529 CPP00450 1065 aa18.29■□□□□ 0.52
SHMT2-206ENST00000553529 HLA-DQB2P05538 268 aa18.29■□□□□ 0.52
SHMT2-206ENST00000553529 ELFN1P0C7U0 828 aa18.29■□□□□ 0.52
SHMT2-206ENST00000553529 TGM2P21980 687 aa18.29■□□□□ 0.52
SHMT2-206ENST00000553529 NIPAL4Q0D2K0 466 aa18.29■□□□□ 0.52
SHMT2-206ENST00000553529 ACOX1Q15067 660 aa18.29■□□□□ 0.52
SHMT2-206ENST00000553529 PAFAH1B3Q15102 231 aaKnown RBP18.29■□□□□ 0.52
SHMT2-206ENST00000553529 TMPRSS12Q86WS5 348 aa18.29■□□□□ 0.52
SHMT2-206ENST00000553529 SLC35F3Q8IY50 421 aa18.29■□□□□ 0.52
SHMT2-206ENST00000553529 IFI44Q8TCB0 444 aa18.29■□□□□ 0.52
SHMT2-206ENST00000553529 HCAR2Q8TDS4 363 aa18.29■□□□□ 0.52
SHMT2-206ENST00000553529 FAF2Q96CS3 445 aa18.29■□□□□ 0.52
SHMT2-206ENST00000553529 IFT43Q96FT9 208 aa18.29■□□□□ 0.52
SHMT2-206ENST00000553529 ZNF599Q96NL3 588 aa18.29■□□□□ 0.52
SHMT2-206ENST00000553529 SEMA3CQ99985 751 aa18.29■□□□□ 0.52
SHMT2-206ENST00000553529 RBSNQ9H1K0 784 aa18.29■□□□□ 0.52
SHMT2-206ENST00000553529 FGF22Q9HCT0 170 aa18.29■□□□□ 0.52
SHMT2-206ENST00000553529 DONSONQ9NYP3 566 aa18.29■□□□□ 0.52
SHMT2-206ENST00000553529 UVRAGQ9P2Y5 699 aa18.29■□□□□ 0.52
SHMT2-206ENST00000553529 CD84Q9UIB8 345 aa18.29■□□□□ 0.52
SHMT2-206ENST00000553529 RABGEF1Q9UJ41 708 aa18.29■□□□□ 0.52
SHMT2-206ENST00000553529 TTLL3Q9Y4R7 772 aa18.29■□□□□ 0.52
SHMT2-206ENST00000553529 YY2O15391 372 aa18.28■□□□□ 0.52
SHMT2-206ENST00000553529 TLX3O43711 291 aaPredicted RBP18.28■□□□□ 0.52
SHMT2-206ENST00000553529 FUCA1P04066 466 aa18.28■□□□□ 0.52
SHMT2-206ENST00000553529 TPM3P06753 285 aa18.28■□□□□ 0.52
SHMT2-206ENST00000553529 KDELR1P24390 212 aa18.28■□□□□ 0.52
SHMT2-206ENST00000553529 ETV3P41162 512 aa18.28■□□□□ 0.52
SHMT2-206ENST00000553529 ZNF135P52742 658 aaPredicted RBP18.28■□□□□ 0.52
SHMT2-206ENST00000553529 ITKQ08881 620 aa18.28■□□□□ 0.52
SHMT2-206ENST00000553529 ZBTB17Q13105 803 aa18.28■□□□□ 0.52
SHMT2-206ENST00000553529 TRIM14Q14142 442 aa18.28■□□□□ 0.52
SHMT2-206ENST00000553529 GRM3Q14832 879 aa18.28■□□□□ 0.52
SHMT2-206ENST00000553529 NFATC4Q14934 902 aa18.28■□□□□ 0.52
SHMT2-206ENST00000553529 HADHQ16836 314 aaKnown RBP18.28■□□□□ 0.52
SHMT2-206ENST00000553529 ZFYVE27Q5T4F4 411 aa18.28■□□□□ 0.52
SHMT2-206ENST00000553529 MARC1Q5VT66 337 aa18.28■□□□□ 0.52
SHMT2-206ENST00000553529 EFL1Q7Z2Z2 1120 aaKnown RBP18.28■□□□□ 0.52
SHMT2-206ENST00000553529 DCP2Q8IU60 420 aaKnown RBP18.28■□□□□ 0.52
SHMT2-206ENST00000553529 TEX26Q8N6G2 289 aa18.28■□□□□ 0.52
SHMT2-206ENST00000553529 PLD5Q8N7P1 536 aa18.28■□□□□ 0.52
SHMT2-206ENST00000553529 TC2NQ8N9U0 490 aa18.28■□□□□ 0.52
SHMT2-206ENST00000553529 HNRNPLLQ8WVV9 542 aaKnown RBP18.28■□□□□ 0.52
SHMT2-206ENST00000553529 COQ10AQ96MF6 247 aa18.28■□□□□ 0.52
SHMT2-206ENST00000553529 LGMNQ99538 433 aa18.28■□□□□ 0.52
SHMT2-206ENST00000553529 A0A1W2PNU3 283 aaPredicted RBP18.27■□□□□ 0.52
SHMT2-206ENST00000553529 LRRD1A4D1F6 860 aa18.27■□□□□ 0.52
SHMT2-206ENST00000553529 H3BM21 787 aa18.27■□□□□ 0.52
SHMT2-206ENST00000553529 KCNK1O00180 336 aa18.27■□□□□ 0.52
SHMT2-206ENST00000553529 OPA1O60313 960 aa18.27■□□□□ 0.52
SHMT2-206ENST00000553529 PGLSO95336 258 aa18.27■□□□□ 0.52
SHMT2-206ENST00000553529 MT-CO3P00414 261 aa18.27■□□□□ 0.52
SHMT2-206ENST00000553529 HOXB3P14651 431 aaPredicted RBP18.27■□□□□ 0.52
SHMT2-206ENST00000553529 NOP2P46087 812 aaKnown RBP18.27■□□□□ 0.52
SHMT2-206ENST00000553529 RENBPP51606 427 aa18.27■□□□□ 0.52
SHMT2-206ENST00000553529 PPARDQ03181 441 aa18.27■□□□□ 0.52
SHMT2-206ENST00000553529 GAS2L3Q86XJ1 694 aa18.27■□□□□ 0.52
SHMT2-206ENST00000553529 KYQ8NBH2 561 aa18.27■□□□□ 0.52
SHMT2-206ENST00000553529 PIH1D2Q8WWB5 315 aa18.27■□□□□ 0.52
SHMT2-206ENST00000553529 RNF25Q96BH1 459 aaPredicted RBP18.27■□□□□ 0.52
SHMT2-206ENST00000553529 CCDC42Q96M95 316 aa18.27■□□□□ 0.52
SHMT2-206ENST00000553529 ZNF670Q9BS34 389 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms