RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 PPP6R2O75170 966 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 GJB5O95377 273 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 PEPDP12955 493 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 PPM1AP35813 382 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 RRP1P56182 461 aaKnown RBP5.29□□□□□ -1.56
ATXN3-218ENST00000553309 STARD3Q14849 445 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 PGM5Q15124 567 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 ZRSR2Q15696 482 aaKnown RBP5.29□□□□□ -1.56
ATXN3-218ENST00000553309 EPC2Q52LR7 807 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 OR4N4Q8N0Y3 316 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 TSPYL6Q8N831 410 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 MNS1Q8NEH6 495 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 LINS1Q8NG48 757 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 DNAAF4Q8WXU2 420 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 RUBCNQ92622 972 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 SLC25A28Q96A46 364 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 MSI2Q96DH6 328 aaKnown RBP5.29□□□□□ -1.56
ATXN3-218ENST00000553309 TMEM41AQ96HV5 264 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 REXO5Q96IC2 774 aaKnown RBP5.29□□□□□ -1.56
ATXN3-218ENST00000553309 RAD9AQ99638 391 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 NCAPGQ9BPX3 1015 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 ALDH8A1Q9H2A2 487 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-218ENST00000553309 MROH8Q9H579 483 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 CCDC134Q9H6E4 229 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 SMC4Q9NTJ3 1288 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 DECR2Q9NUI1 292 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 CTNNA3Q9UI47 895 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 CDC23Q9UJX2 597 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 ANAPC4Q9UJX5 808 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 SLC12A4Q9UP95 1085 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 KIR2DS5A0A0G2JLQ3 304 aa5.28□□□□□ -1.56
ATXN3-218ENST00000553309 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-218ENST00000553309 DPPA5A6NC42 116 aa5.28□□□□□ -1.56
ATXN3-218ENST00000553309 FAM90A10PA6NDY2 464 aa5.28□□□□□ -1.56
ATXN3-218ENST00000553309 B4DGG1 531 aa5.28□□□□□ -1.56
ATXN3-218ENST00000553309 KIR2DS3K7RE56 304 aa5.28□□□□□ -1.56
ATXN3-218ENST00000553309 TPD52L2O43399 206 aaKnown RBP5.28□□□□□ -1.56
ATXN3-218ENST00000553309 PI15O43692 258 aa5.28□□□□□ -1.56
ATXN3-218ENST00000553309 CNTN5O94779 1100 aa5.28□□□□□ -1.56
ATXN3-218ENST00000553309 BAIAP3O94812 1187 aa5.28□□□□□ -1.56
ATXN3-218ENST00000553309 NDUFB8O95169 186 aa5.28□□□□□ -1.56
ATXN3-218ENST00000553309 FGF2P09038 288 aa5.28□□□□□ -1.56
ATXN3-218ENST00000553309 IFIT2P09913 472 aaKnown RBP5.28□□□□□ -1.56
ATXN3-218ENST00000553309 IQCF3P0C7M6 154 aa5.28□□□□□ -1.56
ATXN3-218ENST00000553309 ZNF853P0CG23 659 aa5.28□□□□□ -1.56
ATXN3-218ENST00000553309 AKT1P31749 480 aa5.28□□□□□ -1.56
ATXN3-218ENST00000553309 ICAM3P32942 547 aa5.28□□□□□ -1.56
ATXN3-218ENST00000553309 RPL15P61313 204 aaKnown RBP5.28□□□□□ -1.56
ATXN3-218ENST00000553309 ACVR2BQ13705 512 aa5.28□□□□□ -1.56
ATXN3-218ENST00000553309 PUM3Q15397 648 aaKnown RBP5.28□□□□□ -1.56
ATXN3-218ENST00000553309 B4GALNT4Q76KP1 1039 aa5.28□□□□□ -1.56
ATXN3-218ENST00000553309 TEX11Q8IYF3 940 aa5.28□□□□□ -1.56
ATXN3-218ENST00000553309 SAMD14Q8IZD0 417 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-218ENST00000553309 SVIPQ8NHG7 77 aa5.28□□□□□ -1.56
ATXN3-218ENST00000553309 ZFPM2Q8WW38 1151 aa5.28□□□□□ -1.56
ATXN3-218ENST00000553309 NLRP4Q96MN2 994 aa5.28□□□□□ -1.56
ATXN3-218ENST00000553309 FAM234AQ9H0X4 552 aa5.28□□□□□ -1.56
ATXN3-218ENST00000553309 MFSD1Q9H3U5 465 aa5.28□□□□□ -1.56
ATXN3-218ENST00000553309 SFXN1Q9H9B4 322 aa5.28□□□□□ -1.56
ATXN3-218ENST00000553309 CHST12Q9NRB3 414 aa5.28□□□□□ -1.56
ATXN3-218ENST00000553309 THSD1Q9NS62 852 aa5.28□□□□□ -1.56
ATXN3-218ENST00000553309 ZBTB40Q9NUA8 1239 aa5.28□□□□□ -1.56
ATXN3-218ENST00000553309 RAB21Q9UL25 225 aa5.28□□□□□ -1.56
ATXN3-218ENST00000553309 COL11A1P12107 1806 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-218ENST00000553309 ATG2AQ2TAZ0 1938 aa5.27□□□□□ -1.57
ATXN3-218ENST00000553309 GPR75-ASB3A0A0A6YYF3 556 aa5.27□□□□□ -1.57
ATXN3-218ENST00000553309 TMEM272A0A1B0GTI8 110 aa5.27□□□□□ -1.57
ATXN3-218ENST00000553309 AQP12BA6NM10 295 aa5.27□□□□□ -1.57
ATXN3-218ENST00000553309 TULP2O00295 520 aa5.27□□□□□ -1.57
ATXN3-218ENST00000553309 TRIM38O00635 465 aa5.27□□□□□ -1.57
ATXN3-218ENST00000553309 ZC3H11AO75152 810 aaKnown RBP eCLIP5.27□□□□□ -1.57
ATXN3-218ENST00000553309 RPP40O75818 363 aaKnown RBP5.27□□□□□ -1.57
ATXN3-218ENST00000553309 FLOT1O75955 427 aa5.27□□□□□ -1.57
ATXN3-218ENST00000553309 CYP3A4P08684 503 aa5.27□□□□□ -1.57
ATXN3-218ENST00000553309 TNFRSF1BP20333 461 aa5.27□□□□□ -1.57
ATXN3-218ENST00000553309 TGM2P21980 687 aa5.27□□□□□ -1.57
ATXN3-218ENST00000553309 CIITAP33076 1130 aa5.27□□□□□ -1.57
ATXN3-218ENST00000553309 RFC2P35250 354 aa5.27□□□□□ -1.57
ATXN3-218ENST00000553309 ALDH7A1P49419 539 aaKnown RBP5.27□□□□□ -1.57
ATXN3-218ENST00000553309 FOXL2P58012 376 aa5.27□□□□□ -1.57
ATXN3-218ENST00000553309 SHC2P98077 582 aa5.27□□□□□ -1.57
ATXN3-218ENST00000553309 MECOMQ03112 1051 aa5.27□□□□□ -1.57
ATXN3-218ENST00000553309 COG2Q14746 738 aa5.27□□□□□ -1.57
ATXN3-218ENST00000553309 SMTNL2Q2TAL5 461 aa5.27□□□□□ -1.57
ATXN3-218ENST00000553309 PIK3CD-AS1Q5SR53 167 aa5.27□□□□□ -1.57
ATXN3-218ENST00000553309 ZNF517Q6ZMY9 492 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-218ENST00000553309 KRBA2Q6ZNG9 492 aa5.27□□□□□ -1.57
ATXN3-218ENST00000553309 ZDHHC17Q8IUH5 632 aa5.27□□□□□ -1.57
ATXN3-218ENST00000553309 ADPRHL1Q8NDY3 354 aa5.27□□□□□ -1.57
ATXN3-218ENST00000553309 PHF7Q9BWX1 381 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-218ENST00000553309 CEP295Q9C0D2 2601 aa5.27□□□□□ -1.57
ATXN3-218ENST00000553309 TANC1Q9C0D5 1861 aa5.27□□□□□ -1.57
ATXN3-218ENST00000553309 AAMDCQ9H7C9 122 aa5.27□□□□□ -1.57
ATXN3-218ENST00000553309 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.27□□□□□ -1.57
ATXN3-218ENST00000553309 DONSONQ9NYP3 566 aa5.27□□□□□ -1.57
ATXN3-218ENST00000553309 BARX2Q9UMQ3 279 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-218ENST00000553309 PCDHA12Q9UN75 941 aa5.27□□□□□ -1.57
ATXN3-218ENST00000553309 MAGED2Q9UNF1 606 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-218ENST00000553309 LAMP3Q9UQV4 416 aa5.27□□□□□ -1.57
ATXN3-218ENST00000553309 DDX49Q9Y6V7 483 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms