RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 OR1E3Q8WZA6 343 aa11.46□□□□□ -0.57
SUPT16H-202ENST00000552829 ANP32BQ92688 251 aaKnown RBP11.46□□□□□ -0.57
SUPT16H-202ENST00000552829 ART4Q93070 314 aa11.46□□□□□ -0.57
SUPT16H-202ENST00000552829 NT5C3BQ969T7 300 aa11.46□□□□□ -0.57
SUPT16H-202ENST00000552829 PDXPQ96GD0 296 aa11.46□□□□□ -0.57
SUPT16H-202ENST00000552829 CCDC74BQ96LY2 380 aa11.46□□□□□ -0.57
SUPT16H-202ENST00000552829 WDR92Q96MX6 357 aa11.46□□□□□ -0.57
SUPT16H-202ENST00000552829 KLHL32Q96NJ5 620 aa11.46□□□□□ -0.57
SUPT16H-202ENST00000552829 BPIFA3Q9BQP9 254 aa11.46□□□□□ -0.57
SUPT16H-202ENST00000552829 OSBPL1AQ9BXW6 950 aa11.46□□□□□ -0.57
SUPT16H-202ENST00000552829 TM6SF2Q9BZW4 377 aa11.46□□□□□ -0.57
SUPT16H-202ENST00000552829 PRDM8Q9NQV8 689 aa11.46□□□□□ -0.57
SUPT16H-202ENST00000552829 KLQ9UEF7 1012 aa11.46□□□□□ -0.57
SUPT16H-202ENST00000552829 TNRC6AQ8NDV7 1962 aaKnown RBP11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 LOC101059948A0A1B0GTJ6 334 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 SMTNL1A8MU46 457 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 PPP1R3GB7ZBB8 358 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 GRAP2O75791 330 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 GSRP00390 522 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 PRKAR1AP10644 381 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 TFE3P19532 575 aaPredicted RBP11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 COL8A1P27658 744 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 HTR1BP28222 390 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 GNA12Q03113 381 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 INPP5AQ14642 412 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 MYLK3Q32MK0 819 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 LRRC73Q5JTD7 316 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 FOXR2Q6PJQ5 311 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 TAF8Q7Z7C8 310 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 IRF2BP1Q8IU81 584 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 BMPERQ8N8U9 685 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 TEX19Q8NA77 164 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 MLKLQ8NB16 471 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 AGBL5Q8NDL9 886 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 ZNF397Q8NF99 534 aaPredicted RBP11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 OR2AP1Q8NGE2 309 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 ATL2Q8NHH9 583 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 CXorf40AQ8TE69 158 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 ARHGEF2Q92974 986 aaKnown RBP11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 PGAP3Q96FM1 320 aaPredicted RBP11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 HAPLN3Q96S86 360 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 CPXM1Q96SM3 734 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 NPY6RQ99463 290 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 WRAP53Q9BUR4 548 aaKnown RBP11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 ASPSCR1Q9BZE9 553 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 TKTL2Q9H0I9 626 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 ATP13A1Q9HD20 1204 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 DKK3Q9UBP4 350 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 ARMCX3Q9UH62 379 aaPredicted RBP11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 KCNMB2Q9Y691 235 aa11.45□□□□□ -0.58
SUPT16H-202ENST00000552829 ZNF106Q9H2Y7 1883 aaKnown RBP11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 TMEM202A6NGA9 273 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 WIPF3A6NGB9 483 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 B4DGG1 531 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 KRIT1O00522 736 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 VPS4BO75351 444 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 DAB1O75553 588 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 DDAH2O95865 285 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 ELAVL4P26378 380 aaKnown RBP11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 MAP4P27816 1152 aaKnown RBP11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 TNFRSF8P28908 595 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 ACVRL1P37023 503 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 PRCPP42785 496 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 TPM4P67936 248 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 FKBP3Q00688 224 aaKnown RBP11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 MC1RQ01726 317 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 MYL5Q02045 173 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 TSR1Q2NL82 804 aaKnown RBP11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 AMZ1Q400G9 498 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 HSP90AA4PQ58FG1 418 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 ACBD5Q5T8D3 534 aaPredicted RBP11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 ANKRD40Q6AI12 368 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 OLFML1Q6UWY5 402 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 GDPD4Q6W3E5 623 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 SLC26A9Q7LBE3 791 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 MAMDC2Q7Z304 686 aaPredicted RBP11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 TIPARPQ7Z3E1 657 aaKnown RBP11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 CCDC112Q8NEF3 446 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 OR4D9Q8NGE8 314 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 CCL4L1Q8NHW4 92 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 NELFBQ8WX92 580 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 FUBP1Q96AE4 644 aaKnown RBP11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 EFHD1Q9BUP0 239 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 TMEM168Q9H0V1 697 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 WDCPQ9H6R7 721 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 GPN2Q9H9Y4 310 aaPredicted RBP11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 FGF22Q9HCT0 170 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 OCIAD1Q9NX40 245 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 SLC39A1Q9NY26 324 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 RRN3Q9NYV6 651 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 PDP2Q9P2J9 529 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 VPS4AQ9UN37 437 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 COQ6Q9Y2Z9 468 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 MFHAS1Q9Y4C4 1052 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 OR1A2Q9Y585 309 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 PCDHGA10Q9Y5H3 936 aa11.44□□□□□ -0.58
SUPT16H-202ENST00000552829 A1L4Q6 167 aa11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 TNFRSF10CO14798 259 aa11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 MED7O43513 233 aa11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 CLDN1O95832 211 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms