RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 SPDYCQ5MJ68 293 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 FBXL19Q6PCT2 694 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 GDPD4Q6W3E5 623 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 USP30Q70CQ3 517 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 PGBD5Q8N414 524 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 ANKS4BQ8N8V4 417 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 CCDC197Q8NCU1 140 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 PDCD6IPQ8WUM4 868 aaKnown RBP10.04□□□□□ -0.8
LETMD1-234ENST00000552645 TFB1MQ8WVM0 346 aaKnown RBP10.04□□□□□ -0.8
LETMD1-234ENST00000552645 ARRDC3Q96B67 414 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 KLHL32Q96NJ5 620 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 TSGA13Q96PP4 275 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 PSKH2Q96QS6 385 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 C10orf88Q9H8K7 445 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 SCUBE2Q9NQ36 999 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 PLAAQ9Y263 795 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 PI4KAP42356 2102 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 TBC1D3DA0A087WVF3 549 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 TBC1D3IA0A087WXS9 549 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 TBC1D3EA0A087X179 549 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 TBC1D3KA0A087X1G2 549 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 TBC1D3FA6NER0 549 aaPredicted RBP10.04□□□□□ -0.8
LETMD1-234ENST00000552645 MEI4A8MW99 385 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 TBC1D3LB9A6J9 549 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 BHMG1C9JSJ3 638 aaPredicted RBP10.04□□□□□ -0.8
LETMD1-234ENST00000552645 APOC4-APOC2K7ER74 178 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 NEMP1O14524 444 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 APOC2P02655 101 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 VIMP08670 466 aaKnown RBP10.04□□□□□ -0.8
LETMD1-234ENST00000552645 TBC1D3HP0C7X1 549 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 XPAP23025 273 aaPredicted RBP10.04□□□□□ -0.8
LETMD1-234ENST00000552645 PTGER3P43115 390 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 CARSP49589 748 aaKnown RBP10.04□□□□□ -0.8
LETMD1-234ENST00000552645 SLC7A5Q01650 507 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 OTUD4Q01804 1114 aaKnown RBP10.04□□□□□ -0.8
LETMD1-234ENST00000552645 CREB5Q02930 508 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 CUL1Q13616 776 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 HNRNPDQ14103 355 aaKnown RBP10.04□□□□□ -0.8
LETMD1-234ENST00000552645 PPP1R7Q15435 360 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 CCDC6Q16204 474 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 ZNF805Q5CZA5 627 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 TBC1D3GQ6DHY5 549 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 TBC1D3CQ6IPX1 549 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 NCEH1Q6PIU2 408 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 SDCCAG8Q86SQ7 713 aaPredicted RBP10.04□□□□□ -0.8
LETMD1-234ENST00000552645 C11orf74Q86VG3 221 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 CAMK1DQ8IU85 385 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 PLPP6Q8IY26 295 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 RGL4Q8IZJ4 473 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 TBC1D3Q8IZP1 549 aaPredicted RBP10.04□□□□□ -0.8
LETMD1-234ENST00000552645 ACTL9Q8TC94 416 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 DTNBP1Q96EV8 351 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 ZNF419Q96HQ0 510 aaPredicted RBP10.04□□□□□ -0.8
LETMD1-234ENST00000552645 HSPA12BQ96MM6 686 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 AGAP3Q96P47 875 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 OLFM3Q96PB7 478 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 SEMA3CQ99985 751 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 OSBPL1AQ9BXW6 950 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 C6orf106Q9H6K1 298 aaPredicted RBP10.04□□□□□ -0.8
LETMD1-234ENST00000552645 ATP13A3Q9H7F0 1226 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 WSB2Q9NYS7 404 aaPredicted RBP10.04□□□□□ -0.8
LETMD1-234ENST00000552645 ZFATQ9P243 1243 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 NCDNQ9UBB6 729 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 NFU1Q9UMS0 254 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 NFS1Q9Y697 457 aa10.04□□□□□ -0.8
LETMD1-234ENST00000552645 TRPM6Q9BX84 2022 aa10.03□□□□□ -0.8
LETMD1-234ENST00000552645 GPR179Q6PRD1 2367 aa10.03□□□□□ -0.8
LETMD1-234ENST00000552645 TCRBV7S2A1N4TA0A589 114 aa10.03□□□□□ -0.8
LETMD1-234ENST00000552645 LRRC72A6NJI9 287 aa10.03□□□□□ -0.8
LETMD1-234ENST00000552645 C16orf96A6NNT2 1141 aa10.03□□□□□ -0.8
LETMD1-234ENST00000552645 F5H423 210 aaPredicted RBP10.03□□□□□ -0.8
LETMD1-234ENST00000552645 CES2O00748 559 aa10.03□□□□□ -0.8
LETMD1-234ENST00000552645 PCDH8O95206 1070 aa10.03□□□□□ -0.8
LETMD1-234ENST00000552645 IGLV3-19P01714 112 aa10.03□□□□□ -0.8
LETMD1-234ENST00000552645 HLA-DQB2P05538 268 aa10.03□□□□□ -0.8
LETMD1-234ENST00000552645 LINGO3P0C6S8 592 aa10.03□□□□□ -0.8
LETMD1-234ENST00000552645 ITGB7P26010 798 aa10.03□□□□□ -0.8
LETMD1-234ENST00000552645 SERPINA4P29622 427 aa10.03□□□□□ -0.8
LETMD1-234ENST00000552645 PTPN7P35236 360 aa10.03□□□□□ -0.8
LETMD1-234ENST00000552645 NEK3P51956 506 aa10.03□□□□□ -0.8
LETMD1-234ENST00000552645 ADPRHP54922 357 aa10.03□□□□□ -0.8
LETMD1-234ENST00000552645 EIF3EP60228 445 aaKnown RBP10.03□□□□□ -0.8
LETMD1-234ENST00000552645 DSC2Q02487 901 aa10.03□□□□□ -0.8
LETMD1-234ENST00000552645 ZNF33AQ06730 810 aa10.03□□□□□ -0.8
LETMD1-234ENST00000552645 BCL2L1Q07817 233 aa10.03□□□□□ -0.8
LETMD1-234ENST00000552645 NSUN2Q08J23 767 aaKnown RBP eCLIP10.03□□□□□ -0.8
LETMD1-234ENST00000552645 CCDC15Q0P6D6 951 aa10.03□□□□□ -0.8
LETMD1-234ENST00000552645 ZBTB17Q13105 803 aa10.03□□□□□ -0.8
LETMD1-234ENST00000552645 PMS2CLQ68D20 193 aa10.03□□□□□ -0.8
LETMD1-234ENST00000552645 DARS2Q6PI48 645 aaKnown RBP10.03□□□□□ -0.8
LETMD1-234ENST00000552645 ERN2Q76MJ5 926 aaKnown RBP10.03□□□□□ -0.8
LETMD1-234ENST00000552645 PARS2Q7L3T8 475 aaKnown RBP10.03□□□□□ -0.8
LETMD1-234ENST00000552645 MAATS1Q7Z4T9 603 aa10.03□□□□□ -0.8
LETMD1-234ENST00000552645 TTC7BQ86TV6 843 aa10.03□□□□□ -0.8
LETMD1-234ENST00000552645 KIRREL3Q8IZU9 778 aa10.03□□□□□ -0.8
LETMD1-234ENST00000552645 SUMF1Q8NBK3 374 aa10.03□□□□□ -0.8
LETMD1-234ENST00000552645 MAML1Q92585 1016 aa10.03□□□□□ -0.8
LETMD1-234ENST00000552645 PIGKQ92643 395 aa10.03□□□□□ -0.8
LETMD1-234ENST00000552645 THOC1Q96FV9 657 aaKnown RBP10.03□□□□□ -0.8
LETMD1-234ENST00000552645 CHMP6Q96FZ7 201 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms