RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 PTTG1O95997 202 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 SERPINE1P05121 402 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 PGK2P07205 417 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 SNRPAP09012 282 aaKnown RBP5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 TGFB3P10600 412 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 ACADMP11310 421 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 UNGP13051 313 aaPredicted RBP5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 KRT5P13647 590 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 CD1EP15812 388 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 SPNP16150 400 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 FSTP19883 344 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 CYP3A7P24462 503 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 PTX3P26022 381 aaPredicted RBP5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 RPL10P27635 214 aaKnown RBP5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 IL12AP29459 219 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 GRK4P32298 578 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 BMP8BP34820 402 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 ADMP35318 185 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 GRK3P35626 688 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 CAP2P40123 477 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 QARSP47897 775 aaKnown RBP5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 ARSEP51690 589 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 HK2P52789 917 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 NKX2-5P52952 324 aaPredicted RBP5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 NLRP11P59045 1033 aaKnown RBP5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 TAS2R40P59535 323 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 IGBP1P78318 339 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 MRPS9P82933 396 aaKnown RBP5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 MPP1Q00013 466 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 GBE1Q04446 702 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 CLCQ05315 142 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 INCA1Q0VD86 236 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 SMARCB1Q12824 385 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 MERTKQ12866 999 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 NME3Q13232 169 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 SNTA1Q13424 505 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 SLBPQ14493 270 aaKnown RBP eCLIP5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 PUM3Q15397 648 aaKnown RBP5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 ZNF181Q2M3W8 571 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 SMU1Q2TAY7 513 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 ESCO2Q56NI9 601 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 FAM47AQ5JRC9 791 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 UBE2UQ5VVX9 321 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 ANKRD22Q5VYY1 191 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 LMBRD2Q68DH5 695 aaPredicted RBP5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 KRT39Q6A163 491 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 PPP1R2P3Q6NXS1 205 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 ZCCHC8Q6NZY4 707 aaKnown RBP5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 TTC33Q6PID6 262 aaPredicted RBP5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 SYCE2Q6PIF2 218 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 STXBP4Q6ZWJ1 553 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 SPATC1Q76KD6 591 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 DGLUCYQ7Z3D6 616 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 BMP8AQ7Z5Y6 402 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 SNX32Q86XE0 403 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 EPHX4Q8IUS5 362 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 LYSMD2Q8IV50 215 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 ARHGEF19Q8IW93 802 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 C12orf56Q8IXR9 622 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 PPIL6Q8IXY8 311 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 UBQLNLQ8IYU4 475 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 RCOR2Q8IZ40 523 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 SCML4Q8N228 414 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 CNTD1Q8N815 330 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 ZBTB38Q8NAP3 1195 aaPredicted RBP5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 HIPK4Q8NE63 616 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 NGDNQ8NEJ9 315 aaKnown RBP5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 BHLHE22Q8NFJ8 381 aaPredicted RBP5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 GSDMBQ8TAX9 411 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 URGCPQ8TCY9 931 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 ZNF384Q8TF68 577 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 LRRC59Q96AG4 307 aaKnown RBP5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 SH3KBP1Q96B97 665 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 HDAC11Q96DB2 347 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 ASB9Q96DX5 294 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 MAGED4Q96JG8 741 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 ZNF560Q96MR9 790 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 KREMEN1Q96MU8 473 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 LENG8Q96PV6 779 aaPredicted RBP5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 CDRT15Q96T59 188 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 ADI1Q9BV57 179 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 MECRQ9BV79 373 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 TARS2Q9BW92 718 aaKnown RBP5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 MRPL9Q9BYD2 267 aaKnown RBP5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 NXF2Q9GZY0 626 aaKnown RBP5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 DPEP3Q9H4B8 488 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 PCIF1Q9H4Z3 704 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 RAVER2Q9HCJ3 691 aaKnown RBP5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 TM9SF3Q9HD45 589 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 C6orf50Q9HD87 102 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 PCDH12Q9NPG4 1184 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 CNNM1Q9NRU3 951 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 TAS2R7Q9NYW3 318 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 PCOLCE2Q9UKZ9 415 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 DNPEPQ9ULA0 475 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 SNX7Q9UNH6 387 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 USP22Q9UPT9 525 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 AP3M1Q9Y2T2 418 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 PCDHGB1Q9Y5G3 927 aa5.33□□□□□ -1.56
LSM3P2-201ENST00000551246 A3GALT2U3KPV4 340 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms