RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 TMEM237Q96Q45 408 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 BTBD1Q9H0C5 482 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 INTS7Q9NVH2 962 aaKnown RBP12.25□□□□□ -0.45
NR4A1-215ENST00000550557 RCOR3Q9P2K3 495 aaPredicted RBP12.25□□□□□ -0.45
NR4A1-215ENST00000550557 STRCQ7RTU9 1775 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 A0A096LPK6 155 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 HAPLN1P10915 354 aaPredicted RBP12.25□□□□□ -0.45
NR4A1-215ENST00000550557 CHRNB2P17787 502 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 MC4RP32245 332 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 UBE3AQ05086 875 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 MED21Q13503 144 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 C16orf87Q6PH81 154 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 LAYNQ6UX15 382 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 ARID3BQ8IVW6 561 aaPredicted RBP12.25□□□□□ -0.45
NR4A1-215ENST00000550557 FAM162AQ96A26 154 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 CCSER2Q9H7U1 834 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 ENTPD4Q9Y227 616 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 TBC1D30Q9Y2I9 924 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 COL2A1P02458 1487 aaPredicted RBP12.25□□□□□ -0.45
NR4A1-215ENST00000550557 MAN2B1O00754 1011 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 LIASO43766 372 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 NUDT14O95848 222 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 KCNJ2P63252 427 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 ECT2LQ008S8 904 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 SUZ12Q15022 739 aaKnown RBP12.25□□□□□ -0.45
NR4A1-215ENST00000550557 TMCO2Q7Z6W1 182 aaPredicted RBP12.25□□□□□ -0.45
NR4A1-215ENST00000550557 EXOC3L1Q86VI1 746 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 OR56A4Q8NGH8 313 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 SLC22A17Q8WUG5 538 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 CSPG4P5Q96PW8 444 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 PCYT2Q99447 389 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 SLC38A3Q99624 504 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 FLRT1Q9NZU1 646 aa12.25□□□□□ -0.45
NR4A1-215ENST00000550557 COL22A1Q8NFW1 1626 aaPredicted RBP12.24□□□□□ -0.45
NR4A1-215ENST00000550557 ITGAXP20702 1163 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 CALB2P22676 271 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 PAX7P23759 505 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 GTF2E2P29084 291 aaKnown RBP12.24□□□□□ -0.45
NR4A1-215ENST00000550557 RPIAP49247 311 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 RPS24P62847 133 aaKnown RBP12.24□□□□□ -0.45
NR4A1-215ENST00000550557 ACSM2AQ08AH3 577 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 WDR45BQ5MNZ6 344 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 ACSM2BQ68CK6 577 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 CLEC20AQ6ZU45 233 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 GDPD5Q8WTR4 605 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 SETD7Q8WTS6 366 aaKnown RBP12.24□□□□□ -0.45
NR4A1-215ENST00000550557 P2RY11Q96G91 374 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 MCM8Q9UJA3 840 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 A0A1B0GUL6 1792 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 MAN1A2O60476 641 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 PTPN9P43378 593 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 TAS2R40P59535 323 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 INPP5AQ14642 412 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 ATAD3BQ5T9A4 648 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 RNF43Q68DV7 783 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 MMAAQ8IVH4 418 aaKnown RBP12.24□□□□□ -0.45
NR4A1-215ENST00000550557 TMEM120AQ9BXJ8 343 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 ZNF556Q9HAH1 456 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 APOBEC3GQ9HC16 384 aaKnown RBP12.24□□□□□ -0.45
NR4A1-215ENST00000550557 SCHIP1Q9P0W5 487 aaPredicted RBP12.24□□□□□ -0.45
NR4A1-215ENST00000550557 TNPO3Q9Y5L0 923 aaKnown RBP12.24□□□□□ -0.45
NR4A1-215ENST00000550557 SNX8Q9Y5X2 465 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 GLYATL1P3A0A0U1RQE8 302 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 MAGEA13PA6NCF6 341 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 PPEF2O14830 753 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 UBTFL6P0CB48 400 aaPredicted RBP12.24□□□□□ -0.45
NR4A1-215ENST00000550557 PPP2R1BP30154 601 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 HNF4AP41235 474 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 PLEKHA7Q6IQ23 1121 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 DIS3LQ8TF46 1054 aaKnown RBP12.24□□□□□ -0.45
NR4A1-215ENST00000550557 TFAP2BQ92481 460 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 C8orf48Q96LL4 319 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 CD207Q9UJ71 328 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 ACTL7BQ9Y614 415 aa12.24□□□□□ -0.45
NR4A1-215ENST00000550557 NDST3O95803 873 aa12.23□□□□□ -0.45
NR4A1-215ENST00000550557 CHRNA1P02708 482 aa12.23□□□□□ -0.45
NR4A1-215ENST00000550557 RGS1Q08116 209 aa12.23□□□□□ -0.45
NR4A1-215ENST00000550557 SPIDRQ14159 915 aa12.23□□□□□ -0.45
NR4A1-215ENST00000550557 PLA2G4EQ3MJ16 856 aa12.23□□□□□ -0.45
NR4A1-215ENST00000550557 AGMOQ6ZNB7 445 aa12.23□□□□□ -0.45
NR4A1-215ENST00000550557 LRRN4Q8WUT4 740 aa12.23□□□□□ -0.45
NR4A1-215ENST00000550557 FBXO6Q9NRD1 293 aaPredicted RBP12.23□□□□□ -0.45
NR4A1-215ENST00000550557 C5orf60A6NFR6 353 aa12.23□□□□□ -0.45
NR4A1-215ENST00000550557 MYO1GB0I1T2 1018 aa12.23□□□□□ -0.45
NR4A1-215ENST00000550557 AIM2O14862 343 aa12.23□□□□□ -0.45
NR4A1-215ENST00000550557 PAPSS1O43252 624 aaPredicted RBP12.23□□□□□ -0.45
NR4A1-215ENST00000550557 HS6ST1O60243 411 aa12.23□□□□□ -0.45
NR4A1-215ENST00000550557 TM7SF2O76062 418 aa12.23□□□□□ -0.45
NR4A1-215ENST00000550557 GPR15P49685 360 aa12.23□□□□□ -0.45
NR4A1-215ENST00000550557 TMEM164Q5U3C3 297 aa12.23□□□□□ -0.45
NR4A1-215ENST00000550557 PHOSPHO2Q8TCD6 241 aa12.23□□□□□ -0.45
NR4A1-215ENST00000550557 HDAC10Q969S8 669 aa12.23□□□□□ -0.45
NR4A1-215ENST00000550557 MIEF2Q96C03 454 aa12.23□□□□□ -0.45
NR4A1-215ENST00000550557 ARMC7Q9H6L4 198 aa12.23□□□□□ -0.45
NR4A1-215ENST00000550557 PCDHGC4Q9Y5F7 938 aa12.23□□□□□ -0.45
NR4A1-215ENST00000550557 DOCK2Q92608 1830 aa12.23□□□□□ -0.45
NR4A1-215ENST00000550557 SCN7AQ01118 1682 aa12.23□□□□□ -0.45
NR4A1-215ENST00000550557 DNAJC25-GNG10A0A024R161 153 aa12.23□□□□□ -0.45
NR4A1-215ENST00000550557 SSTR1P30872 391 aa12.23□□□□□ -0.45
NR4A1-215ENST00000550557 FNBP1LQ5T0N5 605 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms