RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 KCNK9Q9NPC2 374 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 IARS2Q9NSE4 1012 aaKnown RBP13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 PHTF1Q9UMS5 762 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 SMG5Q9UPR3 1016 aaKnown RBP13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 DOCK8Q8NF50 2099 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 CHD9Q3L8U1 2897 aa13.76□□□□□ -0.21
CALCOCO1-214ENST00000549613 CCDC78A2IDD5 438 aa13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 TBC1D3BA6NDS4 549 aa13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 TRIM49D1C9J1S8 452 aa13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 ANHXE9PGG2 379 aa13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 TRAFD1O14545 582 aaPredicted RBP13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 BNIP3LO60238 219 aa13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 RPP40O75818 363 aaKnown RBP13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 LPOP22079 712 aaPredicted RBP13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 NFKBIAP25963 317 aa13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 POLD2P49005 469 aa13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 ATP1A2P50993 1020 aa13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 GYS2P54840 703 aa13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 PRAMEP78395 509 aa13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 TJAP1Q5JTD0 557 aa13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 DPY19L3Q6ZPD9 716 aa13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 KIAA0408Q6ZU52 694 aa13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 GLT6D1Q7Z4J2 308 aa13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 STRA8Q7Z7C7 330 aa13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 CNTN4Q8IWV2 1026 aa13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 SUGP1Q8IWZ8 645 aaKnown RBP13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 OR6K2Q8NGY2 324 aa13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 HCAR2Q8TDS4 363 aa13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 MZB1Q8WU39 189 aa13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 CYB5D2Q8WUJ1 264 aa13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 SCG3Q8WXD2 468 aaKnown RBP13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 C19orf43Q9BQ61 176 aa13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 MFSD1Q9H3U5 465 aa13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 BRD9Q9H8M2 597 aa13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 NLE1Q9NVX2 485 aaPredicted RBP13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 NKIRAS1Q9NYS0 192 aa13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 SLC2A6Q9UGQ3 507 aa13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 KIF26AQ9ULI4 1882 aaPredicted RBP13.75□□□□□ -0.21
CALCOCO1-214ENST00000549613 OTOL1A6NHN0 477 aaPredicted RBP13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 TTC34A8MYJ7 566 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 STX7O15400 261 aaKnown RBP13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 UGT1A9O60656 530 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 APODP05090 189 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 PSMA3P25788 255 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 SLC8A1P32418 973 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 MDH1P40925 334 aaKnown RBP13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 OPRD1P41143 372 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 GRIA2P42262 883 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 ABL2P42684 1182 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 KDSRQ06136 332 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 HTR4Q13639 388 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 PTPRNQ16849 979 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 GDPD4Q6W3E5 623 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 Q6ZVU0 165 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 PLCD3Q8N3E9 789 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 TERB1Q8NA31 727 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 ST13P5Q8NFI4 369 aaPredicted RBP13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 OR2A12Q8NGT7 310 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 OR6P1Q8NGX9 317 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 ACMSDQ8TDX5 336 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 FRS2Q8WU20 508 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 SORCS1Q8WY21 1168 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 HDAC10Q969S8 669 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 NXPE3Q969Y0 559 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 CENPTQ96BT3 561 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 ECHDC3Q96DC8 303 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 RBBP8Q99708 897 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 OSBPL1AQ9BXW6 950 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 CAPS2Q9BXY5 557 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 GPR63Q9BZJ6 419 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 ZDHHC6Q9H6R6 413 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 UGT1A7Q9HAW7 530 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 UGT1A10Q9HAW8 530 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 UGT1A8Q9HAW9 530 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 SUN2Q9UH99 717 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 SPO11Q9Y5K1 396 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 NUMBLQ9Y6R0 609 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 DENND4AQ7Z401 1863 aa13.74□□□□□ -0.21
CALCOCO1-214ENST00000549613 EYSQ5T1H1 3165 aa13.73□□□□□ -0.21
CALCOCO1-214ENST00000549613 ANKRD36A6QL64 1941 aa13.73□□□□□ -0.21
CALCOCO1-214ENST00000549613 A0A0J9YYE9 177 aa13.73□□□□□ -0.21
CALCOCO1-214ENST00000549613 A0A1W2PPM1 405 aa13.73□□□□□ -0.21
CALCOCO1-214ENST00000549613 FAM47DPA6NHR8 397 aa13.73□□□□□ -0.21
CALCOCO1-214ENST00000549613 PRRT4C9JH25 899 aa13.73□□□□□ -0.21
CALCOCO1-214ENST00000549613 PRPF4O43172 522 aaKnown RBP eCLIP13.73□□□□□ -0.21
CALCOCO1-214ENST00000549613 KAT7O95251 611 aa13.73□□□□□ -0.21
CALCOCO1-214ENST00000549613 PIGNO95427 931 aa13.73□□□□□ -0.21
CALCOCO1-214ENST00000549613 TRBC1P01850 177 aa13.73□□□□□ -0.21
CALCOCO1-214ENST00000549613 ITGA2BP08514 1039 aa13.73□□□□□ -0.21
CALCOCO1-214ENST00000549613 PIRTP0C851 137 aa13.73□□□□□ -0.21
CALCOCO1-214ENST00000549613 KRT4P19013 534 aa13.73□□□□□ -0.21
CALCOCO1-214ENST00000549613 SLC18A2Q05940 514 aa13.73□□□□□ -0.21
CALCOCO1-214ENST00000549613 GABPB1Q06547 395 aaPredicted RBP13.73□□□□□ -0.21
CALCOCO1-214ENST00000549613 SMAD4Q13485 552 aaKnown RBP13.73□□□□□ -0.21
CALCOCO1-214ENST00000549613 SEPT7Q16181 437 aaKnown RBP13.73□□□□□ -0.21
CALCOCO1-214ENST00000549613 FNDC3BQ53EP0 1204 aaKnown RBP13.73□□□□□ -0.21
CALCOCO1-214ENST00000549613 MROH9Q5TGP6 573 aa13.73□□□□□ -0.21
CALCOCO1-214ENST00000549613 MRNIPQ6NTE8 343 aa13.73□□□□□ -0.21
CALCOCO1-214ENST00000549613 GALNT7Q86SF2 657 aa13.73□□□□□ -0.21
CALCOCO1-214ENST00000549613 SDCCAG8Q86SQ7 713 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms