RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 PDFQ9HBH1 243 aa16.58■□□□□ 0.24
SSH1-208ENST00000548522 DAAM1Q9Y4D1 1078 aa16.58■□□□□ 0.24
SSH1-208ENST00000548522 RNF215Q9Y6U7 377 aa16.58■□□□□ 0.24
SSH1-208ENST00000548522 LRRK1Q38SD2 2015 aa16.57■□□□□ 0.24
SSH1-208ENST00000548522 B4DGG1 531 aa16.57■□□□□ 0.24
SSH1-208ENST00000548522 J3KR12 359 aa16.57■□□□□ 0.24
SSH1-208ENST00000548522 LIPCP11150 499 aa16.57■□□□□ 0.24
SSH1-208ENST00000548522 KRT3P12035 628 aa16.57■□□□□ 0.24
SSH1-208ENST00000548522 UNGP13051 313 aaPredicted RBP16.57■□□□□ 0.24
SSH1-208ENST00000548522 ITGB6P18564 788 aa16.57■□□□□ 0.24
SSH1-208ENST00000548522 GPD1P21695 349 aa16.57■□□□□ 0.24
SSH1-208ENST00000548522 JAM2P57087 298 aa16.57■□□□□ 0.24
SSH1-208ENST00000548522 TYRO3Q06418 890 aa16.57■□□□□ 0.24
SSH1-208ENST00000548522 RALGDSQ12967 914 aa16.57■□□□□ 0.24
SSH1-208ENST00000548522 CERCAMQ5T4B2 595 aa16.57■□□□□ 0.24
SSH1-208ENST00000548522 WDR59Q6PJI9 974 aa16.57■□□□□ 0.24
SSH1-208ENST00000548522 SPRED1Q7Z699 444 aa16.57■□□□□ 0.24
SSH1-208ENST00000548522 SLFN11Q7Z7L1 901 aa16.57■□□□□ 0.24
SSH1-208ENST00000548522 ZNF677Q86XU0 584 aa16.57■□□□□ 0.24
SSH1-208ENST00000548522 PELI3Q8N2H9 469 aa16.57■□□□□ 0.24
SSH1-208ENST00000548522 CCL4L1Q8NHW4 92 aa16.57■□□□□ 0.24
SSH1-208ENST00000548522 CASKIN2Q8WXE0 1202 aa16.57■□□□□ 0.24
SSH1-208ENST00000548522 TRIM44Q96DX7 344 aaPredicted RBP16.57■□□□□ 0.24
SSH1-208ENST00000548522 SUV39H2Q9H5I1 410 aa16.57■□□□□ 0.24
SSH1-208ENST00000548522 NLRC4Q9NPP4 1024 aa16.57■□□□□ 0.24
SSH1-208ENST00000548522 FAM207AQ9NSI2 230 aaPredicted RBP16.57■□□□□ 0.24
SSH1-208ENST00000548522 ATP8A1Q9Y2Q0 1164 aa16.57■□□□□ 0.24
SSH1-208ENST00000548522 PCDHGA4Q9Y5G9 962 aa16.57■□□□□ 0.24
SSH1-208ENST00000548522 FLNCQ14315 2725 aa16.56■□□□□ 0.24
SSH1-208ENST00000548522 TMEM110-MUSTN1A8MSY1 372 aa16.56■□□□□ 0.24
SSH1-208ENST00000548522 GM2AP17900 193 aa16.56■□□□□ 0.24
SSH1-208ENST00000548522 SOX5P35711 763 aa16.56■□□□□ 0.24
SSH1-208ENST00000548522 POLR2FP61218 127 aaKnown RBP16.56■□□□□ 0.24
SSH1-208ENST00000548522 ZFP36L1Q07352 338 aaKnown RBP16.56■□□□□ 0.24
SSH1-208ENST00000548522 PARP15Q460N3 678 aa16.56■□□□□ 0.24
SSH1-208ENST00000548522 TCP11X2Q5H9J9 407 aa16.56■□□□□ 0.24
SSH1-208ENST00000548522 EFHC2Q5JST6 749 aa16.56■□□□□ 0.24
SSH1-208ENST00000548522 SCYL2Q6P3W7 929 aa16.56■□□□□ 0.24
SSH1-208ENST00000548522 SASS6Q6UVJ0 657 aa16.56■□□□□ 0.24
SSH1-208ENST00000548522 DNAAF5Q86Y56 855 aa16.56■□□□□ 0.24
SSH1-208ENST00000548522 SLITRK4Q8IW52 837 aa16.56■□□□□ 0.24
SSH1-208ENST00000548522 FAM46DQ8NEK8 389 aa16.56■□□□□ 0.24
SSH1-208ENST00000548522 HTR3CQ8WXA8 447 aa16.56■□□□□ 0.24
SSH1-208ENST00000548522 CELF6Q96J87 481 aaKnown RBP16.56■□□□□ 0.24
SSH1-208ENST00000548522 TMEM74Q96NL1 305 aa16.56■□□□□ 0.24
SSH1-208ENST00000548522 FAM117AQ9C073 453 aa16.56■□□□□ 0.24
SSH1-208ENST00000548522 TMEM168Q9H0V1 697 aa16.56■□□□□ 0.24
SSH1-208ENST00000548522 STARD5Q9NSY2 213 aa16.56■□□□□ 0.24
SSH1-208ENST00000548522 GPATCH2LQ9NWQ4 482 aa16.56■□□□□ 0.24
SSH1-208ENST00000548522 ADAM22Q9P0K1 906 aa16.56■□□□□ 0.24
SSH1-208ENST00000548522 UBA2Q9UBT2 640 aaPredicted RBP16.56■□□□□ 0.24
SSH1-208ENST00000548522 DGKBQ9Y6T7 804 aa16.56■□□□□ 0.24
SSH1-208ENST00000548522 SCN8AQ9UQD0 1980 aa16.55■□□□□ 0.24
SSH1-208ENST00000548522 C9orf172C9J069 976 aa16.55■□□□□ 0.24
SSH1-208ENST00000548522 TERTO14746 1132 aaKnown RBP16.55■□□□□ 0.24
SSH1-208ENST00000548522 NVLO15381 856 aaKnown RBP16.55■□□□□ 0.24
SSH1-208ENST00000548522 RECQL5O94762 991 aaPredicted RBP16.55■□□□□ 0.24
SSH1-208ENST00000548522 TNFP01375 233 aa16.55■□□□□ 0.24
SSH1-208ENST00000548522 SUOXP51687 545 aa16.55■□□□□ 0.24
SSH1-208ENST00000548522 MAPK10P53779 464 aa16.55■□□□□ 0.24
SSH1-208ENST00000548522 GSCP56915 257 aaPredicted RBP16.55■□□□□ 0.24
SSH1-208ENST00000548522 YBEYP58557 167 aaPredicted RBP16.55■□□□□ 0.24
SSH1-208ENST00000548522 MTM1Q13496 603 aa16.55■□□□□ 0.24
SSH1-208ENST00000548522 C16orf72Q14CZ0 275 aa16.55■□□□□ 0.24
SSH1-208ENST00000548522 AGERQ15109 404 aa16.55■□□□□ 0.24
SSH1-208ENST00000548522 ERAP2Q6P179 960 aa16.55■□□□□ 0.24
SSH1-208ENST00000548522 TAF8Q7Z7C8 310 aa16.55■□□□□ 0.24
SSH1-208ENST00000548522 UMODL1-AS1Q8N2C9 162 aa16.55■□□□□ 0.24
SSH1-208ENST00000548522 C3orf20Q8ND61 904 aa16.55■□□□□ 0.24
SSH1-208ENST00000548522 USP7Q93009 1102 aa16.55■□□□□ 0.24
SSH1-208ENST00000548522 PMEPA1Q969W9 287 aa16.55■□□□□ 0.24
SSH1-208ENST00000548522 NSMCE3Q96MG7 304 aa16.55■□□□□ 0.24
SSH1-208ENST00000548522 SELENOOQ9BVL4 669 aa16.55■□□□□ 0.24
SSH1-208ENST00000548522 LGR4Q9BXB1 951 aa16.55■□□□□ 0.24
SSH1-208ENST00000548522 SEMA6CQ9H3T2 930 aa16.55■□□□□ 0.24
SSH1-208ENST00000548522 LRRC19Q9H756 370 aa16.55■□□□□ 0.24
SSH1-208ENST00000548522 RDH14Q9HBH5 336 aa16.55■□□□□ 0.24
SSH1-208ENST00000548522 APPL1Q9UKG1 709 aa16.55■□□□□ 0.24
SSH1-208ENST00000548522 FZD10Q9ULW2 581 aa16.55■□□□□ 0.24
SSH1-208ENST00000548522 HEMK1Q9Y5R4 338 aaPredicted RBP16.55■□□□□ 0.24
SSH1-208ENST00000548522 TCRBV5S1A1TA0A578 114 aa16.54■□□□□ 0.24
SSH1-208ENST00000548522 WASH4PA8MWX3 477 aa16.54■□□□□ 0.24
SSH1-208ENST00000548522 TMX2-CTNND1H3BSU7 103 aa16.54■□□□□ 0.24
SSH1-208ENST00000548522 GLB1P16278 677 aa16.54■□□□□ 0.24
SSH1-208ENST00000548522 ERCC5P28715 1186 aaPredicted RBP16.54■□□□□ 0.24
SSH1-208ENST00000548522 NSFP46459 744 aaKnown RBP16.54■□□□□ 0.24
SSH1-208ENST00000548522 CSRP3P50461 194 aa16.54■□□□□ 0.24
SSH1-208ENST00000548522 MAZP56270 477 aaKnown RBP16.54■□□□□ 0.24
SSH1-208ENST00000548522 KIAA1024LP59773 190 aa16.54■□□□□ 0.24
SSH1-208ENST00000548522 RPL7AP62424 266 aaKnown RBP16.54■□□□□ 0.24
SSH1-208ENST00000548522 HLTFQ14527 1009 aaKnown RBP eCLIP16.54■□□□□ 0.24
SSH1-208ENST00000548522 CLEC16AQ2KHT3 1053 aa16.54■□□□□ 0.24
SSH1-208ENST00000548522 C14orf28Q4W4Y0 310 aa16.54■□□□□ 0.24
SSH1-208ENST00000548522 MANEAQ5SRI9 462 aa16.54■□□□□ 0.24
SSH1-208ENST00000548522 CFAP58Q5T655 872 aa16.54■□□□□ 0.24
SSH1-208ENST00000548522 PHF19Q5T6S3 580 aa16.54■□□□□ 0.24
SSH1-208ENST00000548522 BRAT1Q6PJG6 821 aa16.54■□□□□ 0.24
SSH1-208ENST00000548522 OGFOD3Q6PK18 319 aa16.54■□□□□ 0.24
SSH1-208ENST00000548522 MON1BQ7L1V2 547 aa16.54■□□□□ 0.24
SSH1-208ENST00000548522 TSEN2Q8NCE0 465 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms