RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 CAMK1DQ8IU85 385 aa12.64□□□□□ -0.39
COPS7A-221ENST00000546229 TSEN2Q8NCE0 465 aaKnown RBP12.64□□□□□ -0.39
COPS7A-221ENST00000546229 CCDC97Q96F63 343 aaPredicted RBP12.64□□□□□ -0.39
COPS7A-221ENST00000546229 WDR92Q96MX6 357 aa12.64□□□□□ -0.39
COPS7A-221ENST00000546229 ZNF641Q96N77 438 aaPredicted RBP12.64□□□□□ -0.39
COPS7A-221ENST00000546229 TUBGCP5Q96RT8 1024 aa12.64□□□□□ -0.39
COPS7A-221ENST00000546229 CNPY3Q9BT09 278 aa12.64□□□□□ -0.39
COPS7A-221ENST00000546229 UBA2Q9UBT2 640 aaPredicted RBP12.64□□□□□ -0.39
COPS7A-221ENST00000546229 DACH1Q9UI36 760 aa12.64□□□□□ -0.39
COPS7A-221ENST00000546229 SPTA1P02549 2419 aa12.64□□□□□ -0.39
COPS7A-221ENST00000546229 SDK2Q58EX2 2172 aa12.64□□□□□ -0.39
COPS7A-221ENST00000546229 UNC13CQ8NB66 2214 aa12.64□□□□□ -0.39
COPS7A-221ENST00000546229 CFAP69A5D8W1 941 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 TMEM110-MUSTN1A8MSY1 372 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 LGALS16A8MUM7 142 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 PYCARD-AS1I3L0S3 204 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 PES1O00541 588 aaKnown RBP12.63□□□□□ -0.39
COPS7A-221ENST00000546229 CREB3O43889 395 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 RPLP0P05388 317 aaKnown RBP12.63□□□□□ -0.39
COPS7A-221ENST00000546229 HOXC4P09017 264 aaPredicted RBP12.63□□□□□ -0.39
COPS7A-221ENST00000546229 HTR7P34969 479 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 STAT1P42224 750 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 ARSDP51689 593 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 NDST2P52849 883 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 INHBCP55103 352 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 RAD51Q06609 339 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 NR1D2Q14995 579 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 SYCP1Q15431 976 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 DNAJC24Q6P3W2 148 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 LIPIQ6XZB0 460 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 ARHGAP36Q6ZRI8 547 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 RAB11FIP2Q7L804 512 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 ZNF438Q7Z4V0 828 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 DTX1Q86Y01 620 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 CCNJLQ8IV13 435 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 CCL4L1Q8NHW4 92 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 GFM1Q96RP9 751 aaKnown RBP12.63□□□□□ -0.39
COPS7A-221ENST00000546229 CCNL2Q96S94 520 aaPredicted RBP12.63□□□□□ -0.39
COPS7A-221ENST00000546229 SELENOOQ9BVL4 669 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 LGR4Q9BXB1 951 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 SLC39A8Q9C0K1 460 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 LRRN3Q9H3W5 708 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 EPB41L5Q9HCM4 733 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 MRPL40Q9NQ50 206 aaKnown RBP12.63□□□□□ -0.39
COPS7A-221ENST00000546229 GPATCH2LQ9NWQ4 482 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 TAS2R14Q9NYV8 317 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 KLQ9UEF7 1012 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 GPR34Q9UPC5 381 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 ST14Q9Y5Y6 855 aa12.63□□□□□ -0.39
COPS7A-221ENST00000546229 NAV2Q8IVL1 2488 aa12.62□□□□□ -0.39
COPS7A-221ENST00000546229 RECQL5O94762 991 aaPredicted RBP12.62□□□□□ -0.39
COPS7A-221ENST00000546229 PEX11BO96011 259 aa12.62□□□□□ -0.39
COPS7A-221ENST00000546229 FUCA1P04066 466 aa12.62□□□□□ -0.39
COPS7A-221ENST00000546229 PCCBP05166 539 aa12.62□□□□□ -0.39
COPS7A-221ENST00000546229 PNLIPP16233 465 aa12.62□□□□□ -0.39
COPS7A-221ENST00000546229 ITGB6P18564 788 aa12.62□□□□□ -0.39
COPS7A-221ENST00000546229 ITIH1P19827 911 aa12.62□□□□□ -0.39
COPS7A-221ENST00000546229 COPB1P53618 953 aaKnown RBP12.62□□□□□ -0.39
COPS7A-221ENST00000546229 B4GALNT1Q00973 533 aa12.62□□□□□ -0.39
COPS7A-221ENST00000546229 GRM3Q14832 879 aa12.62□□□□□ -0.39
COPS7A-221ENST00000546229 FOXR1Q6PIV2 292 aa12.62□□□□□ -0.39
COPS7A-221ENST00000546229 ENPP7Q6UWV6 458 aa12.62□□□□□ -0.39
COPS7A-221ENST00000546229 CCDC81Q6ZN84 652 aa12.62□□□□□ -0.39
COPS7A-221ENST00000546229 CLEC17AQ6ZS10 378 aa12.62□□□□□ -0.39
COPS7A-221ENST00000546229 DPPA4Q7L190 304 aa12.62□□□□□ -0.39
COPS7A-221ENST00000546229 NRROSQ86YC3 692 aa12.62□□□□□ -0.39
COPS7A-221ENST00000546229 TP53INP2Q8IXH6 220 aa12.62□□□□□ -0.39
COPS7A-221ENST00000546229 MCOLN2Q8IZK6 566 aa12.62□□□□□ -0.39
COPS7A-221ENST00000546229 CBARPQ8N350 705 aaPredicted RBP12.62□□□□□ -0.39
COPS7A-221ENST00000546229 PTCD2Q8WV60 388 aaKnown RBP12.62□□□□□ -0.39
COPS7A-221ENST00000546229 COL26A1Q96A83 441 aa12.62□□□□□ -0.39
COPS7A-221ENST00000546229 CELF6Q96J87 481 aaKnown RBP12.62□□□□□ -0.39
COPS7A-221ENST00000546229 COQ10AQ96MF6 247 aa12.62□□□□□ -0.39
COPS7A-221ENST00000546229 ERGIC2Q96RQ1 377 aa12.62□□□□□ -0.39
COPS7A-221ENST00000546229 KCTD15Q96SI1 283 aaPredicted RBP12.62□□□□□ -0.39
COPS7A-221ENST00000546229 TRIM7Q9C029 511 aa12.62□□□□□ -0.39
COPS7A-221ENST00000546229 CATSPERBQ9H7T0 1116 aa12.62□□□□□ -0.39
COPS7A-221ENST00000546229 FANCLQ9NW38 375 aa12.62□□□□□ -0.39
COPS7A-221ENST00000546229 FOXJ2Q9P0K8 574 aa12.62□□□□□ -0.39
COPS7A-221ENST00000546229 GULP1Q9UBP9 304 aa12.62□□□□□ -0.39
COPS7A-221ENST00000546229 LIMA1Q9UHB6 759 aaKnown RBP12.62□□□□□ -0.39
COPS7A-221ENST00000546229 RNF215Q9Y6U7 377 aa12.62□□□□□ -0.39
COPS7A-221ENST00000546229 C9orf172C9J069 976 aa12.61□□□□□ -0.39
COPS7A-221ENST00000546229 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.61□□□□□ -0.39
COPS7A-221ENST00000546229 TNFRSF10CO14798 259 aa12.61□□□□□ -0.39
COPS7A-221ENST00000546229 NVLO15381 856 aaKnown RBP12.61□□□□□ -0.39
COPS7A-221ENST00000546229 GLB1P16278 677 aa12.61□□□□□ -0.39
COPS7A-221ENST00000546229 CR2P20023 1033 aa12.61□□□□□ -0.39
COPS7A-221ENST00000546229 PAPOLAP51003 745 aaKnown RBP12.61□□□□□ -0.39
COPS7A-221ENST00000546229 TPI1P60174 286 aa12.61□□□□□ -0.39
COPS7A-221ENST00000546229 DPYSQ14117 519 aa12.61□□□□□ -0.39
COPS7A-221ENST00000546229 NCAPHQ15003 741 aa12.61□□□□□ -0.39
COPS7A-221ENST00000546229 C14orf28Q4W4Y0 310 aa12.61□□□□□ -0.39
COPS7A-221ENST00000546229 E4F1Q66K89 784 aaPredicted RBP12.61□□□□□ -0.39
COPS7A-221ENST00000546229 PLEKHA7Q6IQ23 1121 aa12.61□□□□□ -0.39
COPS7A-221ENST00000546229 IRF2BP2Q7Z5L9 587 aa12.61□□□□□ -0.39
COPS7A-221ENST00000546229 SRLQ86TD4 932 aa12.61□□□□□ -0.39
COPS7A-221ENST00000546229 GKN2Q86XP6 184 aa12.61□□□□□ -0.39
COPS7A-221ENST00000546229 FBXO39Q8N4B4 442 aa12.61□□□□□ -0.39
COPS7A-221ENST00000546229 OR6C4Q8NGE1 309 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms