RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 CDH2P19022 906 aaPredicted RBP5.71□□□□□ -1.5
COPA-206ENST00000545266 CD58P19256 250 aa5.71□□□□□ -1.5
COPA-206ENST00000545266 KRT24Q2M2I5 525 aa5.71□□□□□ -1.5
COPA-206ENST00000545266 USP41Q3LFD5 358 aa5.71□□□□□ -1.5
COPA-206ENST00000545266 ANKRD54Q6NXT1 300 aa5.71□□□□□ -1.5
COPA-206ENST00000545266 CPLX4Q7Z7G2 160 aa5.71□□□□□ -1.5
COPA-206ENST00000545266 TDRPQ86YL5 185 aa5.71□□□□□ -1.5
COPA-206ENST00000545266 WDR63Q8IWG1 891 aa5.71□□□□□ -1.5
COPA-206ENST00000545266 ZCCHC9Q8N567 271 aaKnown RBP5.71□□□□□ -1.5
COPA-206ENST00000545266 TMEM116Q8NCL8 245 aa5.71□□□□□ -1.5
COPA-206ENST00000545266 B4GALNT2Q8NHY0 566 aa5.71□□□□□ -1.5
COPA-206ENST00000545266 ARRDC2Q8TBH0 407 aa5.71□□□□□ -1.5
COPA-206ENST00000545266 ASB5Q8WWX0 329 aa5.71□□□□□ -1.5
COPA-206ENST00000545266 GTF3C6Q969F1 213 aa5.71□□□□□ -1.5
COPA-206ENST00000545266 SF3B5Q9BWJ5 86 aaKnown RBP5.71□□□□□ -1.5
COPA-206ENST00000545266 EBF3Q9H4W6 596 aa5.71□□□□□ -1.5
COPA-206ENST00000545266 ESRP2Q9H6T0 727 aaKnown RBP5.71□□□□□ -1.5
COPA-206ENST00000545266 BPIFA1Q9NP55 256 aa5.71□□□□□ -1.5
COPA-206ENST00000545266 MKKSQ9NPJ1 570 aaPredicted RBP5.71□□□□□ -1.5
COPA-206ENST00000545266 SLC6A13Q9NSD5 602 aa5.71□□□□□ -1.5
COPA-206ENST00000545266 DIAPH3Q9NSV4 1193 aa5.71□□□□□ -1.5
COPA-206ENST00000545266 INSL5Q9Y5Q6 135 aa5.71□□□□□ -1.5
COPA-206ENST00000545266 LIPT2A6NK58 231 aa5.7□□□□□ -1.5
COPA-206ENST00000545266 NTN1O95631 604 aa5.7□□□□□ -1.5
COPA-206ENST00000545266 SCP2P22307 547 aa5.7□□□□□ -1.5
COPA-206ENST00000545266 MXI1P50539 228 aa5.7□□□□□ -1.5
COPA-206ENST00000545266 RARSP54136 660 aaKnown RBP5.7□□□□□ -1.5
COPA-206ENST00000545266 RAD23BP54727 409 aa5.7□□□□□ -1.5
COPA-206ENST00000545266 FOXG1P55316 489 aaPredicted RBP5.7□□□□□ -1.5
COPA-206ENST00000545266 EIF4A2Q14240 407 aaKnown RBP5.7□□□□□ -1.5
COPA-206ENST00000545266 DPCR1Q3MIW9 517 aa5.7□□□□□ -1.5
COPA-206ENST00000545266 SOWAHCQ53LP3 525 aaPredicted RBP5.7□□□□□ -1.5
COPA-206ENST00000545266 TDRD12Q587J7 1177 aaKnown RBP5.7□□□□□ -1.5
COPA-206ENST00000545266 PPP6R3Q5H9R7 873 aaPredicted RBP5.7□□□□□ -1.5
COPA-206ENST00000545266 C6orf141Q5SZD1 244 aa5.7□□□□□ -1.5
COPA-206ENST00000545266 LRCH2Q5VUJ6 765 aa5.7□□□□□ -1.5
COPA-206ENST00000545266 CCDC30Q5VVM6 783 aa5.7□□□□□ -1.5
COPA-206ENST00000545266 ZNF549Q6P9A3 640 aa5.7□□□□□ -1.5
COPA-206ENST00000545266 NCEH1Q6PIU2 408 aa5.7□□□□□ -1.5
COPA-206ENST00000545266 QSOX2Q6ZRP7 698 aa5.7□□□□□ -1.5
COPA-206ENST00000545266 AGBL3Q8NEM8 1001 aa5.7□□□□□ -1.5
COPA-206ENST00000545266 HUS1BQ8NHY5 278 aa5.7□□□□□ -1.5
COPA-206ENST00000545266 OIT3Q8WWZ8 545 aa5.7□□□□□ -1.5
COPA-206ENST00000545266 ADAMTS14Q8WXS8 1223 aa5.7□□□□□ -1.5
COPA-206ENST00000545266 LRFN5Q96NI6 719 aa5.7□□□□□ -1.5
COPA-206ENST00000545266 ITPAQ9BY32 194 aa5.7□□□□□ -1.5
COPA-206ENST00000545266 OR6C3Q9NZP0 311 aa5.7□□□□□ -1.5
COPA-206ENST00000545266 LIMA1Q9UHB6 759 aaKnown RBP5.7□□□□□ -1.5
COPA-206ENST00000545266 MKLN1Q9UL63 735 aa5.7□□□□□ -1.5
COPA-206ENST00000545266 ADAM18Q9Y3Q7 739 aa5.7□□□□□ -1.5
COPA-206ENST00000545266 KCNE2Q9Y6J6 123 aa5.7□□□□□ -1.5
COPA-206ENST00000545266 STON1Q9Y6Q2 735 aa5.7□□□□□ -1.5
COPA-206ENST00000545266 CKAP5Q14008 2032 aa5.69□□□□□ -1.5
COPA-206ENST00000545266 CPED1A4D0V7 1026 aa5.69□□□□□ -1.5
COPA-206ENST00000545266 TIMM23O14925 209 aa5.69□□□□□ -1.5
COPA-206ENST00000545266 BCAT2O15382 392 aaPredicted RBP5.69□□□□□ -1.5
COPA-206ENST00000545266 GLUD1P00367 558 aa5.69□□□□□ -1.5
COPA-206ENST00000545266 SPARCP09486 303 aa5.69□□□□□ -1.5
COPA-206ENST00000545266 PBX3P40426 434 aa5.69□□□□□ -1.5
COPA-206ENST00000545266 GLUD2P49448 558 aa5.69□□□□□ -1.5
COPA-206ENST00000545266 SETQ01105 290 aaPredicted RBP5.69□□□□□ -1.5
COPA-206ENST00000545266 CRYZQ08257 329 aaKnown RBP5.69□□□□□ -1.5
COPA-206ENST00000545266 DSC1Q08554 894 aa5.69□□□□□ -1.5
COPA-206ENST00000545266 CSTF3Q12996 717 aaKnown RBP5.69□□□□□ -1.5
COPA-206ENST00000545266 ITGADQ13349 1161 aa5.69□□□□□ -1.5
COPA-206ENST00000545266 C2orf68Q2NKX9 166 aa5.69□□□□□ -1.5
COPA-206ENST00000545266 CXorf66Q5JRM2 361 aaPredicted RBP5.69□□□□□ -1.5
COPA-206ENST00000545266 CYP20A1Q6UW02 462 aa5.69□□□□□ -1.5
COPA-206ENST00000545266 SCCPDHQ8NBX0 429 aa5.69□□□□□ -1.5
COPA-206ENST00000545266 ERGIC1Q969X5 290 aa5.69□□□□□ -1.5
COPA-206ENST00000545266 MMABQ96EY8 250 aaPredicted RBP5.69□□□□□ -1.5
COPA-206ENST00000545266 PPP1R13BQ96KQ4 1090 aa5.69□□□□□ -1.5
COPA-206ENST00000545266 MMTAG2Q9BU76 263 aaKnown RBP5.69□□□□□ -1.5
COPA-206ENST00000545266 MRPL44Q9H9J2 332 aaKnown RBP5.69□□□□□ -1.5
COPA-206ENST00000545266 FBRSL1Q9HCM7 1045 aaKnown RBP5.69□□□□□ -1.5
COPA-206ENST00000545266 BLOC1S4Q9NUP1 217 aa5.69□□□□□ -1.5
COPA-206ENST00000545266 CISD1Q9NZ45 108 aaKnown RBP5.69□□□□□ -1.5
COPA-206ENST00000545266 AAR2Q9Y312 384 aaKnown RBP5.69□□□□□ -1.5
COPA-206ENST00000545266 CEPT1Q9Y6K0 416 aa5.69□□□□□ -1.5
COPA-206ENST00000545266 FAM237AA0A1B0GTK4 181 aa5.68□□□□□ -1.5
COPA-206ENST00000545266 TMEM202A6NGA9 273 aa5.68□□□□□ -1.5
COPA-206ENST00000545266 HSPA12AO43301 675 aa5.68□□□□□ -1.5
COPA-206ENST00000545266 MLYCDO95822 493 aa5.68□□□□□ -1.5
COPA-206ENST00000545266 EIF2S1P05198 315 aaKnown RBP5.68□□□□□ -1.5
COPA-206ENST00000545266 MAOAP21397 527 aa5.68□□□□□ -1.5
COPA-206ENST00000545266 TM4SF1P30408 202 aa5.68□□□□□ -1.5
COPA-206ENST00000545266 MAPK4P31152 587 aa5.68□□□□□ -1.5
COPA-206ENST00000545266 HNRNPH1P31943 449 aaKnown RBP5.68□□□□□ -1.5
COPA-206ENST00000545266 DRAP1Q14919 205 aaPredicted RBP5.68□□□□□ -1.5
COPA-206ENST00000545266 FAM69BQ5VUD6 431 aa5.68□□□□□ -1.5
COPA-206ENST00000545266 FBXO46Q6PJ61 603 aaPredicted RBP5.68□□□□□ -1.5
COPA-206ENST00000545266 KLHL24Q6TFL4 600 aa5.68□□□□□ -1.5
COPA-206ENST00000545266 LCTLQ6UWM7 567 aa5.68□□□□□ -1.5
COPA-206ENST00000545266 C4orf50Q6ZRC1 276 aa5.68□□□□□ -1.5
COPA-206ENST00000545266 ARHGAP12Q8IWW6 846 aa5.68□□□□□ -1.5
COPA-206ENST00000545266 CLIP4Q8N3C7 705 aa5.68□□□□□ -1.5
COPA-206ENST00000545266 ZBTB2Q8N680 514 aa5.68□□□□□ -1.5
COPA-206ENST00000545266 MIGA1Q8NAN2 632 aa5.68□□□□□ -1.5
COPA-206ENST00000545266 ARHGEF2Q92974 986 aaKnown RBP5.68□□□□□ -1.5
COPA-206ENST00000545266 ZBTB9Q96C00 473 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms