RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 CNPY4Q8N129 248 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 MREGQ8N565 214 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 TTC8Q8TAM2 541 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 HCAR2Q8TDS4 363 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 PYROXD1Q8WU10 500 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 CYB5D2Q8WUJ1 264 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 SPOCK2Q92563 424 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 MRGPRX2Q96LB1 330 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 HEPHQ9BQS7 1158 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 MLPHQ9BV36 600 aaPredicted RBP9.59□□□□□ -0.87
YBX3-215ENST00000544504 FICDQ9BVA6 458 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 TMEM121BQ9BXQ6 578 aaPredicted RBP9.59□□□□□ -0.87
YBX3-215ENST00000544504 TM6SF2Q9BZW4 377 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 ARRDC1-AS1Q9H2J1 176 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 ACBD3Q9H3P7 528 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 SAYSD1Q9NPB0 183 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 UBP1Q9NZI7 540 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 HACD3Q9P035 362 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 THAP10Q9P2Z0 257 aaPredicted RBP9.59□□□□□ -0.87
YBX3-215ENST00000544504 HECAQ9UBI9 543 aaPredicted RBP9.59□□□□□ -0.87
YBX3-215ENST00000544504 SLCO3A1Q9UIG8 710 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 WASF3Q9UPY6 502 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 RAI2Q9Y5P3 530 aa9.59□□□□□ -0.87
YBX3-215ENST00000544504 TICRRQ7Z2Z1 1910 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 TCRBV7S3A2A0A539 114 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 F5H423 210 aaPredicted RBP9.58□□□□□ -0.88
YBX3-215ENST00000544504 AXIN1O15169 862 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 RNASEH1O60930 286 aaKnown RBP9.58□□□□□ -0.88
YBX3-215ENST00000544504 MYBL2P10244 700 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 MAGEA4P43358 317 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 GRIA4P48058 902 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 NOVA1P51513 510 aaKnown RBP9.58□□□□□ -0.88
YBX3-215ENST00000544504 SUOXP51687 545 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 CCNHP51946 323 aaPredicted RBP9.58□□□□□ -0.88
YBX3-215ENST00000544504 PMS2P54278 862 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 EPHB1P54762 984 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 PDE1BQ01064 536 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 CCDC15Q0P6D6 951 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 FOXC1Q12948 553 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 LRRC32Q14392 662 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 ELAVL3Q14576 367 aaKnown RBP9.58□□□□□ -0.88
YBX3-215ENST00000544504 ZNF234Q14588 700 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 STARD3Q14849 445 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 SLC1A5Q15758 541 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 PCSK7Q16549 785 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 BBS9Q3SYG4 887 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 ATXN7L2Q5T6C5 722 aaPredicted RBP9.58□□□□□ -0.88
YBX3-215ENST00000544504 ARMC12Q5T9G4 340 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 BRAT1Q6PJG6 821 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 Q6ZVU0 165 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 NLRP9Q7RTR0 991 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 HDXQ7Z353 690 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 CROCCP2Q86T23 111 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 CAND1Q86VP6 1230 aaKnown RBP9.58□□□□□ -0.88
YBX3-215ENST00000544504 PALM2Q8IXS6 379 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.58□□□□□ -0.88
YBX3-215ENST00000544504 ZNF513Q8N8E2 541 aaPredicted RBP9.58□□□□□ -0.88
YBX3-215ENST00000544504 PPHLN1Q8NEY8 458 aaKnown RBP9.58□□□□□ -0.88
YBX3-215ENST00000544504 OR52K1Q8NGK4 314 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 OR2A12Q8NGT7 310 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 GABPB2Q8TAK5 448 aaPredicted RBP9.58□□□□□ -0.88
YBX3-215ENST00000544504 FRS2Q8WU20 508 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 OR8D1Q8WZ84 308 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 ANKRD7Q92527 254 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 CHFRQ96EP1 664 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 MYO19Q96H55 970 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 EXOC2Q96KP1 924 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 GORASP1Q9BQQ3 440 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 TDRD1Q9BXT4 1180 aaKnown RBP9.58□□□□□ -0.88
YBX3-215ENST00000544504 NEUROG2Q9H2A3 272 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 TNKS2Q9H2K2 1166 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 TRABDQ9H4I3 376 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 EVLQ9UI08 416 aaPredicted RBP9.58□□□□□ -0.88
YBX3-215ENST00000544504 PCDHGA5Q9Y5G8 931 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 ACTL7AQ9Y615 435 aa9.58□□□□□ -0.88
YBX3-215ENST00000544504 FLNBO75369 2602 aaKnown RBP9.57□□□□□ -0.88
YBX3-215ENST00000544504 HEATR9A2RTY3 570 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 TTC34A8MYJ7 566 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 C1QTNF3-AMACRE9PGA6 284 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 TAF4O00268 1085 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 HTRA2O43464 458 aaPredicted RBP9.57□□□□□ -0.88
YBX3-215ENST00000544504 ATP8B1O43520 1251 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 BNIP3LO60238 219 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 SYNCRIPO60506 623 aaKnown RBP9.57□□□□□ -0.88
YBX3-215ENST00000544504 ZNF821O75541 412 aaPredicted RBP9.57□□□□□ -0.88
YBX3-215ENST00000544504 EPN2O95208 641 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 PGLSO95336 258 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 CRTAMO95727 393 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 AGTP01019 485 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 POLBP06746 335 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 ABHD2P08910 425 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 FAM153BP0C7A2 387 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 PGAM1P18669 254 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 ADRA1DP25100 572 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 NTSR1P30989 418 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 RGRP47804 291 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 SOX9P48436 509 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 NUMBP49757 651 aa9.57□□□□□ -0.88
YBX3-215ENST00000544504 SESN2P58004 480 aaPredicted RBP9.57□□□□□ -0.88
YBX3-215ENST00000544504 SFSWAPQ12872 951 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms