RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 RHDQ02161 417 aa15.4■□□□□ 0.06
CNOT9-208ENST00000542068 PRKCQQ04759 706 aa15.4■□□□□ 0.06
CNOT9-208ENST00000542068 KCTD11Q693B1 232 aa15.4■□□□□ 0.06
CNOT9-208ENST00000542068 PKN3Q6P5Z2 889 aa15.4■□□□□ 0.06
CNOT9-208ENST00000542068 OR52K2Q8NGK3 314 aa15.4■□□□□ 0.06
CNOT9-208ENST00000542068 PBXIP1Q96AQ6 731 aa15.4■□□□□ 0.06
CNOT9-208ENST00000542068 KLHL5Q96PQ7 755 aa15.4■□□□□ 0.06
CNOT9-208ENST00000542068 PAIP1Q9H074 479 aaKnown RBP15.4■□□□□ 0.06
CNOT9-208ENST00000542068 BRD8Q9H0E9 1235 aa15.4■□□□□ 0.06
CNOT9-208ENST00000542068 UNC93B1Q9H1C4 597 aa15.4■□□□□ 0.06
CNOT9-208ENST00000542068 UPF3AQ9H1J1 476 aaKnown RBP15.4■□□□□ 0.06
CNOT9-208ENST00000542068 GDAP2Q9NXN4 497 aa15.4■□□□□ 0.06
CNOT9-208ENST00000542068 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.4■□□□□ 0.06
CNOT9-208ENST00000542068 FBXO5Q9UKT4 447 aa15.4■□□□□ 0.06
CNOT9-208ENST00000542068 OR51F1A6NGY5 319 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 CD151P48509 253 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 SLC5A3P53794 718 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 XKR5Q6UX68 686 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 ALKAL1Q6UXT8 129 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 PIM3Q86V86 326 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 FIBCD1Q8N539 461 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 ISL2Q96A47 359 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 EMID1Q96A84 441 aaPredicted RBP15.39■□□□□ 0.05
CNOT9-208ENST00000542068 OLFM1Q99784 485 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 ZNF385DQ9H6B1 395 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 AGO3Q9H9G7 860 aaKnown RBP15.39■□□□□ 0.05
CNOT9-208ENST00000542068 RCOR3Q9P2K3 495 aaPredicted RBP15.39■□□□□ 0.05
CNOT9-208ENST00000542068 SLCO1B7G3V0H7 640 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 ATP6V1G1O75348 118 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 PIRTP0C851 137 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 MTHFD1P11586 935 aaKnown RBP15.39■□□□□ 0.05
CNOT9-208ENST00000542068 CPB1P15086 417 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 NCK1P16333 377 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 EMP3P54852 163 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 RPL26P61254 145 aaKnown RBP15.39■□□□□ 0.05
CNOT9-208ENST00000542068 SCIMPQ6UWF3 145 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 TOP6BLQ8N6T0 577 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 PPHLN1Q8NEY8 458 aaKnown RBP15.39■□□□□ 0.05
CNOT9-208ENST00000542068 SH3RF2Q8TEC5 729 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 HDAC11Q96DB2 347 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 EFHD1Q9BUP0 239 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 OSBPL11Q9BXB4 747 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 RRAGCQ9HB90 399 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 WDR6Q9NNW5 1121 aaKnown RBP15.39■□□□□ 0.05
CNOT9-208ENST00000542068 NDFIP2Q9NV92 336 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 BTRCQ9Y297 605 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 ANKRD6Q9Y2G4 727 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 GLTPD2A6NH11 291 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 H3BNH8 94 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 NRP2O60462 931 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 SIX3O95343 332 aaPredicted RBP15.39■□□□□ 0.05
CNOT9-208ENST00000542068 ITGB1P05556 798 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 ZNF23P17027 643 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 ARL1P40616 181 aaPredicted RBP15.39■□□□□ 0.05
CNOT9-208ENST00000542068 STX1BP61266 288 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 ESRRGP62508 458 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 RPS6KA2Q15349 733 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 DDR2Q16832 855 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 ANKRD49Q8WVL7 239 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 SMARCD1Q96GM5 515 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 ZNF419Q96HQ0 510 aaPredicted RBP15.39■□□□□ 0.05
CNOT9-208ENST00000542068 C3orf30Q96M34 536 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 GPR78Q96P69 363 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 SLC2A11Q9BYW1 496 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 FBXW11Q9UKB1 542 aa15.39■□□□□ 0.05
CNOT9-208ENST00000542068 MAGEB16A2A368 324 aa15.38■□□□□ 0.05
CNOT9-208ENST00000542068 A8MT66 165 aa15.38■□□□□ 0.05
CNOT9-208ENST00000542068 SCAMP3O14828 347 aaKnown RBP15.38■□□□□ 0.05
CNOT9-208ENST00000542068 SOAT2O75908 522 aa15.38■□□□□ 0.05
CNOT9-208ENST00000542068 ATP5F1P24539 256 aaPredicted RBP15.38■□□□□ 0.05
CNOT9-208ENST00000542068 PCSK1P29120 753 aa15.38■□□□□ 0.05
CNOT9-208ENST00000542068 TPP2P29144 1249 aaPredicted RBP15.38■□□□□ 0.05
CNOT9-208ENST00000542068 SPRYD7Q5W111 196 aa15.38■□□□□ 0.05
CNOT9-208ENST00000542068 DQX1Q8TE96 717 aaKnown RBP15.38■□□□□ 0.05
CNOT9-208ENST00000542068 THAP11Q96EK4 314 aa15.38■□□□□ 0.05
CNOT9-208ENST00000542068 B3GALT6Q96L58 329 aa15.38■□□□□ 0.05
CNOT9-208ENST00000542068 ADAM2Q99965 735 aa15.38■□□□□ 0.05
CNOT9-208ENST00000542068 TMLHEQ9NVH6 421 aa15.38■□□□□ 0.05
CNOT9-208ENST00000542068 SMOXQ9NWM0 555 aa15.38■□□□□ 0.05
CNOT9-208ENST00000542068 MKI67P46013 3256 aaKnown RBP15.38■□□□□ 0.05
CNOT9-208ENST00000542068 EEF1B2P24534 225 aaKnown RBP15.38■□□□□ 0.05
CNOT9-208ENST00000542068 LHX1P48742 406 aa15.38■□□□□ 0.05
CNOT9-208ENST00000542068 NAA20P61599 178 aa15.38■□□□□ 0.05
CNOT9-208ENST00000542068 LRP8Q14114 963 aa15.38■□□□□ 0.05
CNOT9-208ENST00000542068 ZIK1Q3SY52 487 aaPredicted RBP15.38■□□□□ 0.05
CNOT9-208ENST00000542068 PCID2Q5JVF3 399 aa15.38■□□□□ 0.05
CNOT9-208ENST00000542068 GPR158Q5T848 1215 aa15.38■□□□□ 0.05
CNOT9-208ENST00000542068 ACBD5Q5T8D3 534 aaPredicted RBP15.38■□□□□ 0.05
CNOT9-208ENST00000542068 OVOS1Q6IE37 1185 aa15.38■□□□□ 0.05
CNOT9-208ENST00000542068 NEPROQ6NW34 567 aa15.38■□□□□ 0.05
CNOT9-208ENST00000542068 SPATA2LQ8IUW3 424 aaPredicted RBP15.38■□□□□ 0.05
CNOT9-208ENST00000542068 DNAJB14Q8TBM8 379 aa15.38■□□□□ 0.05
CNOT9-208ENST00000542068 KCNA7Q96RP8 456 aa15.38■□□□□ 0.05
CNOT9-208ENST00000542068 SEPHS2Q99611 448 aa15.38■□□□□ 0.05
CNOT9-208ENST00000542068 NAA50Q9GZZ1 169 aaKnown RBP15.38■□□□□ 0.05
CNOT9-208ENST00000542068 CLK4Q9HAZ1 481 aaKnown RBP15.38■□□□□ 0.05
CNOT9-208ENST00000542068 PNPLA3Q9NST1 481 aa15.38■□□□□ 0.05
CNOT9-208ENST00000542068 TRAF6Q9Y4K3 522 aa15.38■□□□□ 0.05
CNOT9-208ENST00000542068 INPP4BO15327 924 aa15.37■□□□□ 0.05
CNOT9-208ENST00000542068 WARSP23381 471 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms