RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 PMF1Q6P1K2 205 aa9.85□□□□□ -0.83
CHFR-220ENST00000541817 C22orf39Q6P5X5 142 aa9.85□□□□□ -0.83
CHFR-220ENST00000541817 FOXR2Q6PJQ5 311 aa9.85□□□□□ -0.83
CHFR-220ENST00000541817 OGFOD3Q6PK18 319 aa9.85□□□□□ -0.83
CHFR-220ENST00000541817 ZNF438Q7Z4V0 828 aa9.85□□□□□ -0.83
CHFR-220ENST00000541817 TMEM139Q8IV31 216 aa9.85□□□□□ -0.83
CHFR-220ENST00000541817 C12orf56Q8IXR9 622 aa9.85□□□□□ -0.83
CHFR-220ENST00000541817 SMYD4Q8IYR2 804 aaPredicted RBP9.85□□□□□ -0.83
CHFR-220ENST00000541817 DENND6BQ8NEG7 585 aa9.85□□□□□ -0.83
CHFR-220ENST00000541817 OR6K2Q8NGY2 324 aa9.85□□□□□ -0.83
CHFR-220ENST00000541817 SEMA4DQ92854 862 aa9.85□□□□□ -0.83
CHFR-220ENST00000541817 PDXPQ96GD0 296 aa9.85□□□□□ -0.83
CHFR-220ENST00000541817 PRMT1Q99873 361 aaKnown RBP9.85□□□□□ -0.83
CHFR-220ENST00000541817 EFHD1Q9BUP0 239 aa9.85□□□□□ -0.83
CHFR-220ENST00000541817 ASPSCR1Q9BZE9 553 aa9.85□□□□□ -0.83
CHFR-220ENST00000541817 IMPG2Q9BZV3 1241 aa9.85□□□□□ -0.83
CHFR-220ENST00000541817 SUDS3Q9H7L9 328 aaPredicted RBP9.85□□□□□ -0.83
CHFR-220ENST00000541817 L2HGDHQ9H9P8 463 aa9.85□□□□□ -0.83
CHFR-220ENST00000541817 SLAMF7Q9NQ25 335 aa9.85□□□□□ -0.83
CHFR-220ENST00000541817 CNGB3Q9NQW8 809 aa9.85□□□□□ -0.83
CHFR-220ENST00000541817 COX16Q9P0S2 106 aa9.85□□□□□ -0.83
CHFR-220ENST00000541817 VPS51Q9UID3 782 aa9.85□□□□□ -0.83
CHFR-220ENST00000541817 OR1A2Q9Y585 309 aa9.85□□□□□ -0.83
CHFR-220ENST00000541817 PCDHB3Q9Y5E6 796 aa9.85□□□□□ -0.83
CHFR-220ENST00000541817 RPS6KL1Q9Y6S9 549 aa9.85□□□□□ -0.83
CHFR-220ENST00000541817 ANKRD36A6QL64 1941 aa9.85□□□□□ -0.83
CHFR-220ENST00000541817 ARHGEF17Q96PE2 2063 aaPredicted RBP9.84□□□□□ -0.83
CHFR-220ENST00000541817 BICDL2A1A5D9 508 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 A6NCN8 305 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 TCAF2A6NFQ2 919 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 RHPN2P1A8MT19 583 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 PSMA7O14818 248 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 TSPAN6O43657 245 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 AP1G1O43747 822 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 ZNF821O75541 412 aaPredicted RBP9.84□□□□□ -0.83
CHFR-220ENST00000541817 URI1O94763 535 aaPredicted RBP9.84□□□□□ -0.83
CHFR-220ENST00000541817 NADKO95544 446 aaPredicted RBP9.84□□□□□ -0.83
CHFR-220ENST00000541817 TNFP01375 233 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 APOEP02649 317 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 EEF1GP26641 437 aaKnown RBP9.84□□□□□ -0.83
CHFR-220ENST00000541817 CSF2RBP32927 897 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 PBX1P40424 430 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 LEPRP48357 1165 aaKnown RBP9.84□□□□□ -0.83
CHFR-220ENST00000541817 CCL11P51671 97 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 PGDP52209 483 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 PMS2P54278 862 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 PPP3CAQ08209 521 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 NNTQ13423 1086 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 KRT31Q15323 416 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 TSR1Q2NL82 804 aaKnown RBP9.84□□□□□ -0.83
CHFR-220ENST00000541817 JMJD6Q6NYC1 403 aaPredicted RBP9.84□□□□□ -0.83
CHFR-220ENST00000541817 FBXL22Q6P050 247 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 TMTC1Q8IUR5 882 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 CREBRFQ8IUR6 639 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 BMPERQ8N8U9 685 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 CPLX3Q8WVH0 158 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 KCTD13Q8WZ19 329 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 FUBP1Q96AE4 644 aaKnown RBP9.84□□□□□ -0.83
CHFR-220ENST00000541817 FAM149B1Q96BN6 582 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 DHTKD1Q96HY7 919 aaPredicted RBP9.84□□□□□ -0.83
CHFR-220ENST00000541817 SERPINB11Q96P15 392 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 RPRD1AQ96P16 312 aaPredicted RBP9.84□□□□□ -0.83
CHFR-220ENST00000541817 WRAP53Q9BUR4 548 aaKnown RBP9.84□□□□□ -0.83
CHFR-220ENST00000541817 LRRC27Q9C0I9 530 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 DNAI2Q9GZS0 605 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 TMEM168Q9H0V1 697 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 THAP9Q9H5L6 903 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 ZDHHC6Q9H6R6 413 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 EXOC1Q9NV70 894 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 ASF1BQ9NVP2 202 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 DMAC2Q9NW81 257 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 HESX1Q9UBX0 185 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 KLQ9UEF7 1012 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 CROTQ9UKG9 612 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 VANGL2Q9ULK5 521 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 HS3ST2Q9Y278 367 aa9.84□□□□□ -0.83
CHFR-220ENST00000541817 LRRC10BA6NIK2 292 aa9.83□□□□□ -0.84
CHFR-220ENST00000541817 NUDT21O43809 227 aaKnown RBP9.83□□□□□ -0.84
CHFR-220ENST00000541817 MFAP3LO75121 409 aa9.83□□□□□ -0.84
CHFR-220ENST00000541817 RHOBTB3O94955 611 aa9.83□□□□□ -0.84
CHFR-220ENST00000541817 HNRNPH3P31942 346 aaKnown RBP9.83□□□□□ -0.84
CHFR-220ENST00000541817 STAT5AP42229 794 aa9.83□□□□□ -0.84
CHFR-220ENST00000541817 PRCPP42785 496 aa9.83□□□□□ -0.84
CHFR-220ENST00000541817 PPM1FP49593 454 aaPredicted RBP9.83□□□□□ -0.84
CHFR-220ENST00000541817 GNG11P61952 73 aa9.83□□□□□ -0.84
CHFR-220ENST00000541817 SNRPFP62306 86 aaKnown RBP9.83□□□□□ -0.84
CHFR-220ENST00000541817 TESK1Q15569 626 aa9.83□□□□□ -0.84
CHFR-220ENST00000541817 KNOP1Q1ED39 458 aaKnown RBP9.83□□□□□ -0.84
CHFR-220ENST00000541817 ZRANB3Q5FWF4 1079 aa9.83□□□□□ -0.84
CHFR-220ENST00000541817 TCP11X2Q5H9J9 407 aa9.83□□□□□ -0.84
CHFR-220ENST00000541817 RABGAP1LQ5R372 815 aa9.83□□□□□ -0.84
CHFR-220ENST00000541817 ANKRD40Q6AI12 368 aa9.83□□□□□ -0.84
CHFR-220ENST00000541817 TRIM65Q6PJ69 517 aa9.83□□□□□ -0.84
CHFR-220ENST00000541817 APTXQ7Z2E3 356 aaKnown RBP9.83□□□□□ -0.84
CHFR-220ENST00000541817 TMC2Q8TDI7 906 aa9.83□□□□□ -0.84
CHFR-220ENST00000541817 PATE1Q8WXA2 126 aa9.83□□□□□ -0.84
CHFR-220ENST00000541817 OR1E3Q8WZA6 343 aa9.83□□□□□ -0.84
CHFR-220ENST00000541817 EEF2KMTQ96G04 330 aa9.83□□□□□ -0.84
CHFR-220ENST00000541817 BTN2A3PQ96KV6 586 aa9.83□□□□□ -0.84
CHFR-220ENST00000541817 RBM15Q96T37 977 aaKnown RBP eCLIP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms