RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 ISG20Q96AZ6 181 aaKnown RBP9.51□□□□□ -0.89
YBX3-211ENST00000541351 AGAP3Q96P47 875 aa9.51□□□□□ -0.89
YBX3-211ENST00000541351 SLC38A3Q99624 504 aa9.51□□□□□ -0.89
YBX3-211ENST00000541351 PRMT1Q99873 361 aaKnown RBP9.51□□□□□ -0.89
YBX3-211ENST00000541351 TMEM168Q9H0V1 697 aa9.51□□□□□ -0.89
YBX3-211ENST00000541351 EPB41L1Q9H4G0 881 aa9.51□□□□□ -0.89
YBX3-211ENST00000541351 VANGL2Q9ULK5 521 aa9.51□□□□□ -0.89
YBX3-211ENST00000541351 OSGIN2Q9Y236 505 aa9.51□□□□□ -0.89
YBX3-211ENST00000541351 ITM2BQ9Y287 266 aa9.51□□□□□ -0.89
YBX3-211ENST00000541351 PKDREJQ9NTG1 2253 aa9.51□□□□□ -0.89
YBX3-211ENST00000541351 A8MU76 341 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 MAPK13O15264 365 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 PRICKLE3O43900 615 aaPredicted RBP9.5□□□□□ -0.89
YBX3-211ENST00000541351 ADCY5O95622 1261 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 ECEL1O95672 775 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 POP4O95707 220 aaKnown RBP9.5□□□□□ -0.89
YBX3-211ENST00000541351 TRUB2O95900 331 aaKnown RBP9.5□□□□□ -0.89
YBX3-211ENST00000541351 SNRPB2P08579 225 aaKnown RBP9.5□□□□□ -0.89
YBX3-211ENST00000541351 HOXC4P09017 264 aaPredicted RBP9.5□□□□□ -0.89
YBX3-211ENST00000541351 HTR1EP28566 365 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 CSF2RBP32927 897 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 ETFBP38117 255 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 ACADSBP45954 432 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 VAMP7P51809 220 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 NDST2P52849 883 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 DLG4P78352 724 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 PDE1BQ01064 536 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 AUHQ13825 339 aaKnown RBP9.5□□□□□ -0.89
YBX3-211ENST00000541351 ZNF235Q14590 738 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 ZNF630Q2M218 657 aaPredicted RBP9.5□□□□□ -0.89
YBX3-211ENST00000541351 VWA5B1Q5TIE3 1220 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 LRRC31Q6UY01 552 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 LINGO4Q6UY18 593 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 TMEM135Q86UB9 458 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 RBMXL3Q8N7X1 1067 aaKnown RBP9.5□□□□□ -0.89
YBX3-211ENST00000541351 TMEM102Q8N9M5 508 aaPredicted RBP9.5□□□□□ -0.89
YBX3-211ENST00000541351 GALNT6Q8NCL4 622 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 UBA3Q8TBC4 463 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 TAS1R2Q8TE23 839 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 COG1Q8WTW3 980 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 SH3KBP1Q96B97 665 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 C14orf79Q96F83 325 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 TMUB1Q9BVT8 246 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 TRIM8Q9BZR9 551 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 ACTL8Q9H568 366 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 FAM204AQ9H8W3 233 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 POPDC2Q9HBU9 364 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 TMEM8AQ9HCN3 771 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 TMEM51Q9NW97 253 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 TRNAU1APQ9NX07 287 aaKnown RBP9.5□□□□□ -0.89
YBX3-211ENST00000541351 LNPEPQ9UIQ6 1025 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 OR1A2Q9Y585 309 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 SRPRBQ9Y5M8 271 aaKnown RBP9.5□□□□□ -0.89
YBX3-211ENST00000541351 AKAP9Q99996 3911 aa9.5□□□□□ -0.89
YBX3-211ENST00000541351 KRIT1O00522 736 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 FANCGO15287 622 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 KCNN4O15554 427 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 STX10O60499 249 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 IPO13O94829 963 aaKnown RBP9.49□□□□□ -0.89
YBX3-211ENST00000541351 NDUFA10O95299 355 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 MAP3K6O95382 1288 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 PCCBP05166 539 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 FGF1P05230 155 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 UGT2B4P06133 528 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 EDN3P14138 238 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 BMP6P22004 513 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 ERCC5P28715 1186 aaPredicted RBP9.49□□□□□ -0.89
YBX3-211ENST00000541351 RGS7P49802 495 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 ART1P52961 327 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 CDK17Q00537 523 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 DPYDQ12882 1025 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 AGERQ15109 404 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 WSCD2Q2TBF2 565 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 CPZQ66K79 652 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 KRT39Q6A163 491 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 ERAP2Q6P179 960 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 LCLAT1Q6UWP7 414 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 RPTNQ6XPR3 784 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 MED25Q71SY5 747 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 FJX1Q86VR8 437 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 PLXDC1Q8IUK5 500 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 ZNF808Q8N4W9 903 aaPredicted RBP9.49□□□□□ -0.89
YBX3-211ENST00000541351 SLC35F5Q8WV83 523 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 OR1E3Q8WZA6 343 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 MED15Q96RN5 788 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 RANBP9Q96S59 729 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 PSMB7Q99436 277 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 SMAD5Q99717 465 aaKnown RBP9.49□□□□□ -0.89
YBX3-211ENST00000541351 BARD1Q99728 777 aaKnown RBP9.49□□□□□ -0.89
YBX3-211ENST00000541351 WRAP53Q9BUR4 548 aaKnown RBP9.49□□□□□ -0.89
YBX3-211ENST00000541351 MIS12Q9H081 205 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 APMAPQ9HDC9 416 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 LHX9Q9NQ69 397 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 TAAR2Q9P1P5 351 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 ZNHIT2Q9UHR6 403 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 CROCCQ5TZA2 2017 aa9.49□□□□□ -0.89
YBX3-211ENST00000541351 DNHD1Q96M86 4753 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 PRSS38A1L453 326 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 M0QYV0 167 aa9.48□□□□□ -0.89
YBX3-211ENST00000541351 O00370 1275 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms