RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 RECQLP46063 649 aaPredicted RBP10.68□□□□□ -0.7
ATL3-204ENST00000540699 TPMTP51580 245 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 CCNHP51946 323 aaPredicted RBP10.68□□□□□ -0.7
ATL3-204ENST00000540699 RHOAP61586 193 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 SNRPD1P62314 119 aaKnown RBP10.68□□□□□ -0.7
ATL3-204ENST00000540699 ZNF844Q08AG5 666 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 NSUN2Q08J23 767 aaKnown RBP eCLIP10.68□□□□□ -0.7
ATL3-204ENST00000540699 SLC10A7Q0GE19 358 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 SLC29A2Q14542 456 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 LBRQ14739 615 aaKnown RBP10.68□□□□□ -0.7
ATL3-204ENST00000540699 KYNUQ16719 465 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 MYLK3Q32MK0 819 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 USP39Q53GS9 565 aaKnown RBP10.68□□□□□ -0.7
ATL3-204ENST00000540699 DENND2CQ68D51 928 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 ALG1LQ6GMV1 187 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 LRRC8BQ6P9F7 803 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 KIAA1324Q6UXG2 1013 aaKnown RBP10.68□□□□□ -0.7
ATL3-204ENST00000540699 C11orf74Q86VG3 221 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 MMAAQ8IVH4 418 aaKnown RBP10.68□□□□□ -0.7
ATL3-204ENST00000540699 PDIK1LQ8N165 341 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 PGBD3Q8N328 593 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 PDCD7Q8N8D1 485 aaKnown RBP10.68□□□□□ -0.7
ATL3-204ENST00000540699 CHST14Q8NCH0 376 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 OR2W6PQ8NHA6 318 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 PIP4K2CQ8TBX8 421 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 ERLEC1Q96DZ1 483 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 OXNAD1Q96HP4 312 aaPredicted RBP10.68□□□□□ -0.7
ATL3-204ENST00000540699 ZC3H10Q96K80 434 aaKnown RBP10.68□□□□□ -0.7
ATL3-204ENST00000540699 C9orf72Q96LT7 481 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 TTC25Q96NG3 672 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 HEPHQ9BQS7 1158 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 TMEM109Q9BVC6 243 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 TM6SF2Q9BZW4 377 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 GLOD4Q9HC38 313 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 LRRC4CQ9HCJ2 640 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 XAB2Q9HCS7 855 aaKnown RBP10.68□□□□□ -0.7
ATL3-204ENST00000540699 CD93Q9NPY3 652 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 RBM22Q9NW64 420 aaKnown RBP eCLIP10.68□□□□□ -0.7
ATL3-204ENST00000540699 HECAQ9UBI9 543 aaPredicted RBP10.68□□□□□ -0.7
ATL3-204ENST00000540699 SEPT3Q9UH03 358 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 IL36AQ9UHA7 158 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 GMEB2Q9UKD1 530 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 SARDHQ9UL12 918 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 TEX264Q9Y6I9 313 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 LRRK1Q38SD2 2015 aa10.68□□□□□ -0.7
ATL3-204ENST00000540699 CNOT1A5YKK6 2376 aaKnown RBP10.68□□□□□ -0.7
ATL3-204ENST00000540699 CACNA1GO43497 2377 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 TRPM6Q9BX84 2022 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 C1QTNF3-AMACRE9PGA6 284 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 MUSKO15146 869 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 MID1O15344 667 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 AVILO75366 819 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 ACSL3O95573 720 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 POP4O95707 220 aaKnown RBP10.67□□□□□ -0.7
ATL3-204ENST00000540699 IGSF6O95976 241 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 IL1BP01584 269 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 DNTTP04053 509 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 OXTRP30559 389 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 DRD3P35462 400 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 RGRP47804 291 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 PSMD8P48556 350 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 RENBPP51606 427 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 EIF3BP55884 814 aaKnown RBP10.67□□□□□ -0.7
ATL3-204ENST00000540699 GPX6P59796 221 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 SFSWAPQ12872 951 aaKnown RBP10.67□□□□□ -0.7
ATL3-204ENST00000540699 SRSF5Q13243 272 aaKnown RBP10.67□□□□□ -0.7
ATL3-204ENST00000540699 LPAL2Q16609 132 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 BBS9Q3SYG4 887 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 TTC31Q49AM3 519 aaPredicted RBP10.67□□□□□ -0.7
ATL3-204ENST00000540699 CCDC38Q502W7 563 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 ATXN7L2Q5T6C5 722 aaPredicted RBP10.67□□□□□ -0.7
ATL3-204ENST00000540699 FAM46CQ5VWP2 391 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 LAIR1Q6GTX8 287 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 KBTBD6Q86V97 674 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 IGDCC3Q8IVU1 814 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 ZBED8Q8IZ13 594 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 PGBD5Q8N414 524 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 AADATQ8N5Z0 425 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 TADA1Q96BN2 335 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 LRRC39Q96DD0 335 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 SPACA7Q96KW9 195 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 SIGLEC10Q96LC7 697 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 MGME1Q9BQP7 344 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 CINPQ9BW66 212 aaPredicted RBP10.67□□□□□ -0.7
ATL3-204ENST00000540699 OSBPL1AQ9BXW6 950 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 HDAC8Q9BY41 377 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 CPEB1Q9BZB8 566 aaKnown RBP10.67□□□□□ -0.7
ATL3-204ENST00000540699 PLAC1Q9HBJ0 212 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 MED4Q9NPJ6 270 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 CASS4Q9NQ75 786 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 WSB2Q9NYS7 404 aaPredicted RBP10.67□□□□□ -0.7
ATL3-204ENST00000540699 MBD1Q9UIS9 605 aaPredicted RBP10.67□□□□□ -0.7
ATL3-204ENST00000540699 RAB23Q9ULC3 237 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 FZD4Q9ULV1 537 aa10.67□□□□□ -0.7
ATL3-204ENST00000540699 TSPAN11A1L157 253 aa10.66□□□□□ -0.7
ATL3-204ENST00000540699 E7EVH7 732 aa10.66□□□□□ -0.7
ATL3-204ENST00000540699 INSIG1O15503 277 aa10.66□□□□□ -0.7
ATL3-204ENST00000540699 PSMD3O43242 534 aa10.66□□□□□ -0.7
ATL3-204ENST00000540699 SLC7A4O43246 635 aa10.66□□□□□ -0.7
ATL3-204ENST00000540699 LEFTY1O75610 366 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms