RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 ECHDC3Q96DC8 303 aa12.08□□□□□ -0.48
CBX3P4-202ENST00000540428 PDXPQ96GD0 296 aa12.08□□□□□ -0.48
CBX3P4-202ENST00000540428 FLNBO75369 2602 aaKnown RBP12.07□□□□□ -0.48
CBX3P4-202ENST00000540428 ASH1LQ9NR48 2969 aaKnown RBP12.07□□□□□ -0.48
CBX3P4-202ENST00000540428 ARHGAP42A6NI28 874 aa12.07□□□□□ -0.48
CBX3P4-202ENST00000540428 J3KR12 359 aa12.07□□□□□ -0.48
CBX3P4-202ENST00000540428 CACNB4O00305 520 aaPredicted RBP12.07□□□□□ -0.48
CBX3P4-202ENST00000540428 NVLO15381 856 aaKnown RBP12.07□□□□□ -0.48
CBX3P4-202ENST00000540428 RECQL5O94762 991 aaPredicted RBP12.07□□□□□ -0.48
CBX3P4-202ENST00000540428 PCCBP05166 539 aa12.07□□□□□ -0.48
CBX3P4-202ENST00000540428 CCDC172P0C7W6 258 aa12.07□□□□□ -0.48
CBX3P4-202ENST00000540428 JMJD7P0C870 316 aa12.07□□□□□ -0.48
CBX3P4-202ENST00000540428 LIPCP11150 499 aa12.07□□□□□ -0.48
CBX3P4-202ENST00000540428 TRIM23P36406 574 aa12.07□□□□□ -0.48
CBX3P4-202ENST00000540428 POLR2LP62875 67 aaKnown RBP12.07□□□□□ -0.48
CBX3P4-202ENST00000540428 ZFP36L1Q07352 338 aaKnown RBP12.07□□□□□ -0.48
CBX3P4-202ENST00000540428 NSUN2Q08J23 767 aaKnown RBP eCLIP12.07□□□□□ -0.48
CBX3P4-202ENST00000540428 RALGDSQ12967 914 aa12.07□□□□□ -0.48
CBX3P4-202ENST00000540428 CERCAMQ5T4B2 595 aa12.07□□□□□ -0.48
CBX3P4-202ENST00000540428 AFMIDQ63HM1 303 aa12.07□□□□□ -0.48
CBX3P4-202ENST00000540428 DCUN1D2Q6PH85 259 aa12.07□□□□□ -0.48
CBX3P4-202ENST00000540428 SRLQ86TD4 932 aa12.07□□□□□ -0.48
CBX3P4-202ENST00000540428 CCNJLQ8IV13 435 aa12.07□□□□□ -0.48
CBX3P4-202ENST00000540428 MCOLN2Q8IZK6 566 aa12.07□□□□□ -0.48
CBX3P4-202ENST00000540428 ANKRD20A12PQ8NF67 263 aa12.07□□□□□ -0.48
CBX3P4-202ENST00000540428 FUBP1Q96AE4 644 aaKnown RBP12.07□□□□□ -0.48
CBX3P4-202ENST00000540428 AGPAT1Q99943 283 aa12.07□□□□□ -0.48
CBX3P4-202ENST00000540428 SLC39A8Q9C0K1 460 aa12.07□□□□□ -0.48
CBX3P4-202ENST00000540428 SEPT11Q9NVA2 429 aaKnown RBP12.07□□□□□ -0.48
CBX3P4-202ENST00000540428 ATMQ13315 3056 aa12.07□□□□□ -0.48
CBX3P4-202ENST00000540428 TMEM202A6NGA9 273 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 LRRC10BA6NIK2 292 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 LGALS16A8MUM7 142 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 PDE2AO00408 941 aaPredicted RBP12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 EFSO43281 561 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 NUDT21O43809 227 aaKnown RBP12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 NOBOXO60393 691 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 PALMO75781 387 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 ITGB2P05107 769 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 ELFN1P0C7U0 828 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 RGRP47804 291 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 PAPOLAP51003 745 aaKnown RBP12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 ZNF135P52742 658 aaPredicted RBP12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 COPB1P53618 953 aaKnown RBP12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 BCL2L1Q07817 233 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 HLTFQ14527 1009 aaKnown RBP eCLIP12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 TSR1Q2NL82 804 aaKnown RBP12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 C14orf28Q4W4Y0 310 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 ACAD10Q6JQN1 1059 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 LIPIQ6XZB0 460 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 SPRED1Q7Z699 444 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 TAF8Q7Z7C8 310 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 JAMLQ86YT9 394 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 PLA2G15Q8NCC3 412 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 TSEN2Q8NCE0 465 aaKnown RBP12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 FAM46DQ8NEK8 389 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 OR1E3Q8WZA6 343 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 SPOCK2Q92563 424 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 CELF6Q96J87 481 aaKnown RBP12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 PCMTD1Q96MG8 357 aaPredicted RBP12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 ERGIC2Q96RQ1 377 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 CMKLR1Q99788 373 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 CINPQ9BW66 212 aaPredicted RBP12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 FOXP3Q9BZS1 431 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 B3GNT4Q9C0J1 378 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 FGF22Q9HCT0 170 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 FANCLQ9NW38 375 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 KCTD5Q9NXV2 234 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 SEPT10Q9P0V9 454 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 LIMA1Q9UHB6 759 aaKnown RBP12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 AP4E1Q9UPM8 1137 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 LOXL2Q9Y4K0 774 aa12.06□□□□□ -0.48
CBX3P4-202ENST00000540428 A0A1W2PQ67 120 aa12.05□□□□□ -0.48
CBX3P4-202ENST00000540428 EEF2KO00418 725 aaKnown RBP12.05□□□□□ -0.48
CBX3P4-202ENST00000540428 TRAFD1O14545 582 aaPredicted RBP12.05□□□□□ -0.48
CBX3P4-202ENST00000540428 HGFP14210 728 aa12.05□□□□□ -0.48
CBX3P4-202ENST00000540428 FERP16591 822 aa12.05□□□□□ -0.48
CBX3P4-202ENST00000540428 CD82P27701 267 aa12.05□□□□□ -0.48
CBX3P4-202ENST00000540428 RENBPP51606 427 aa12.05□□□□□ -0.48
CBX3P4-202ENST00000540428 AP1S1P61966 158 aa12.05□□□□□ -0.48
CBX3P4-202ENST00000540428 OGDHQ02218 1023 aa12.05□□□□□ -0.48
CBX3P4-202ENST00000540428 IL10RBQ08334 325 aa12.05□□□□□ -0.48
CBX3P4-202ENST00000540428 ARHGEF7Q14155 803 aa12.05□□□□□ -0.48
CBX3P4-202ENST00000540428 TCEA2Q15560 299 aa12.05□□□□□ -0.48
CBX3P4-202ENST00000540428 CLPPQ16740 277 aaPredicted RBP12.05□□□□□ -0.48
CBX3P4-202ENST00000540428 ERMARDQ5T6L9 678 aa12.05□□□□□ -0.48
CBX3P4-202ENST00000540428 KCTD16Q68DU8 428 aa12.05□□□□□ -0.48
CBX3P4-202ENST00000540428 RBM43Q6ZSC3 357 aaKnown RBP12.05□□□□□ -0.48
CBX3P4-202ENST00000540428 RFX8Q6ZV50 586 aa12.05□□□□□ -0.48
CBX3P4-202ENST00000540428 NYAP1Q6ZVC0 841 aa12.05□□□□□ -0.48
CBX3P4-202ENST00000540428 USP53Q70EK8 1073 aa12.05□□□□□ -0.48
CBX3P4-202ENST00000540428 DPPA4Q7L190 304 aa12.05□□□□□ -0.48
CBX3P4-202ENST00000540428 PSTKQ8IV42 348 aaKnown RBP12.05□□□□□ -0.48
CBX3P4-202ENST00000540428 SLITRK4Q8IW52 837 aa12.05□□□□□ -0.48
CBX3P4-202ENST00000540428 KIAA1524Q8TCG1 905 aa12.05□□□□□ -0.48
CBX3P4-202ENST00000540428 SGF29Q96ES7 293 aa12.05□□□□□ -0.48
CBX3P4-202ENST00000540428 PSKH2Q96QS6 385 aa12.05□□□□□ -0.48
CBX3P4-202ENST00000540428 TMEM168Q9H0V1 697 aa12.05□□□□□ -0.48
CBX3P4-202ENST00000540428 CLMPQ9H6B4 373 aa12.05□□□□□ -0.48
CBX3P4-202ENST00000540428 WDR26Q9H7D7 661 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms