RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 ZNF613Q6PF04 617 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 FAM49AQ9H0Q0 323 aaPredicted RBP11.13□□□□□ -0.63
PBX1-212ENST00000540236 PPIL3Q9H2H8 161 aaKnown RBP11.13□□□□□ -0.63
PBX1-212ENST00000540236 EMC3Q9P0I2 261 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 GMPPBQ9Y5P6 360 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 ZNF335Q9H4Z2 1342 aaPredicted RBP11.13□□□□□ -0.63
PBX1-212ENST00000540236 LOC102724428A0A0B4J2F2 783 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 SLURP2P0DP57 97 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 CD40LGP29965 261 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 SIK1P57059 783 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 ACAP2Q15057 778 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 CFAP77Q6ZQR2 320 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 ART5Q96L15 291 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 PPP1R2P1Q96PQ5 205 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 GIMAP2Q9UG22 337 aa11.13□□□□□ -0.63
PBX1-212ENST00000540236 CCDC162PA2VCL2 907 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 SSNA1O43805 119 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 FAM217AQ8IXS0 508 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 FAM109AQ8N4B1 249 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 RHOBTB2Q9BYZ6 727 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 ZDHHC7Q9NXF8 308 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 ZDHHC2Q9UIJ5 367 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 TPRKBQ9Y3C4 175 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 MED7O43513 233 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 CYBBP04839 570 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 S100A9P06702 114 aaKnown RBP11.12□□□□□ -0.63
PBX1-212ENST00000540236 THRBP10828 461 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 GLDCP23378 1020 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 PLA2G16P53816 162 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 GRSF1Q12849 480 aaKnown RBP eCLIP11.12□□□□□ -0.63
PBX1-212ENST00000540236 CUL2Q13617 745 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 UGT8Q16880 541 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 FLAD1Q8NFF5 587 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 OR6P1Q8NGX9 317 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 SLC47A1Q96FL8 570 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 BARD1Q99728 777 aaKnown RBP11.12□□□□□ -0.63
PBX1-212ENST00000540236 DPCDQ9BVM2 203 aaPredicted RBP11.12□□□□□ -0.63
PBX1-212ENST00000540236 MTF2Q9Y483 593 aaPredicted RBP11.12□□□□□ -0.63
PBX1-212ENST00000540236 FCGR1AP12314 374 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 TNNI3P19429 210 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 KDELR1P24390 212 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 KPNA2P52292 529 aaKnown RBP11.12□□□□□ -0.63
PBX1-212ENST00000540236 RPL26P61254 145 aaKnown RBP11.12□□□□□ -0.63
PBX1-212ENST00000540236 PRKAA1Q13131 559 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 CAMK2BQ13554 666 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 SPDYE2Q495Y8 402 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 LYPD8Q6UX82 237 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 KIAA0408Q6ZU52 694 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 ITIH5Q86UX2 942 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 EID3Q8N140 333 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 TMEM143Q96AN5 459 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 MTFMTQ96DP5 389 aaKnown RBP11.12□□□□□ -0.63
PBX1-212ENST00000540236 FSD1LQ9BXM9 530 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 MKRN2Q9H000 416 aaKnown RBP11.12□□□□□ -0.63
PBX1-212ENST00000540236 ERVK-18Q9QC07 812 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 C9P02748 559 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 ITGAVP06756 1048 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 RD3LP0DJH9 198 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 NFE2Q16621 373 aaPredicted RBP11.12□□□□□ -0.63
PBX1-212ENST00000540236 SPDYE7PQ495Y7 208 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 ATP6AP1LQ52LC2 224 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 ZNF648Q5T619 568 aaPredicted RBP11.12□□□□□ -0.63
PBX1-212ENST00000540236 BTN2A1Q7KYR7 527 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 BEST2Q8NFU1 509 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 IPMKQ8NFU5 416 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 DCSTAMPQ9H295 470 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 ZNF277Q9NRM2 450 aaPredicted RBP11.12□□□□□ -0.63
PBX1-212ENST00000540236 ITSN1Q15811 1721 aa11.12□□□□□ -0.63
PBX1-212ENST00000540236 DFNA5O60443 496 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 PRDX6P30041 224 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 IDUAP35475 653 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 PTPN9P43378 593 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 MAN2A2P49641 1150 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 SMSP52788 366 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 CDH13P55290 713 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 RAB15P59190 212 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 CLVS2Q5SYC1 327 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 HID1Q8IV36 788 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 NANOGQ9H9S0 305 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 MID1IP1Q9NPA3 183 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 VANGL2Q9ULK5 521 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 ZNF804BA4D1E1 1349 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 TNK2Q07912 1038 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 ARL13AQ5H913 290 aaPredicted RBP11.11□□□□□ -0.63
PBX1-212ENST00000540236 FAM219BQ5XKK7 198 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 RNF111Q6ZNA4 994 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 GLB1L3Q8NCI6 653 aaPredicted RBP11.11□□□□□ -0.63
PBX1-212ENST00000540236 ADAMTS16Q8TE57 1224 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 GTF3C2Q8WUA4 911 aaPredicted RBP11.11□□□□□ -0.63
PBX1-212ENST00000540236 PIGKQ92643 395 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 FAM84BQ96KN1 310 aaPredicted RBP11.11□□□□□ -0.63
PBX1-212ENST00000540236 PSKH2Q96QS6 385 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 PHOX2BQ99453 314 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 AGAP2Q99490 1192 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 POLR3FQ9H1D9 316 aaPredicted RBP11.11□□□□□ -0.63
PBX1-212ENST00000540236 ZHX2Q9Y6X8 837 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 TYW5A2RUC4 315 aaKnown RBP11.11□□□□□ -0.63
PBX1-212ENST00000540236 CENPBD1B2RD01 187 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 KATNA1O75449 491 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 LYPLA2O95372 231 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms