RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 CALCAP01258 141 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 CXCL8P10145 99 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 HNRNPDQ14103 355 aaKnown RBP12.68□□□□□ -0.38
DDX55-206ENST00000539934 FRA10AC1Q70Z53 315 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 GALNT5Q7Z7M9 940 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 ADGRG2Q8IZP9 1017 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 FAM109AQ8N4B1 249 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 MINDY2Q8NBR6 621 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 C7orf26Q96N11 449 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 FRMD6Q96NE9 622 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 MTG1Q9BT17 334 aaPredicted RBP12.68□□□□□ -0.38
DDX55-206ENST00000539934 NTMT1Q9BV86 223 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 C6orf62Q9GZU0 229 aaPredicted RBP12.68□□□□□ -0.38
DDX55-206ENST00000539934 HOXD1Q9GZZ0 328 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 ZNF700Q9H0M5 742 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 TMEM245Q9H330 911 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 AK5Q9Y6K8 562 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 CITO14578 2027 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 SYNDIG1LA6NDD5 238 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 SMIM23A6NLE4 172 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 C16orf96A6NNT2 1141 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 F2P00734 622 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 CHRNA1P02708 482 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 MCF2P10911 925 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 ARF4P18085 180 aaPredicted RBP12.68□□□□□ -0.38
DDX55-206ENST00000539934 ATF4P18848 351 aaPredicted RBP12.68□□□□□ -0.38
DDX55-206ENST00000539934 ACO1P21399 889 aaKnown RBP12.68□□□□□ -0.38
DDX55-206ENST00000539934 CTNNA2P26232 953 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 SLCO1A2P46721 670 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 ENTPD1P49961 510 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 CPT1AP50416 773 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 AIF1P55008 147 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 AP1S2P56377 157 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 ZBTB16Q05516 673 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 CD300CQ08708 224 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 ASPHQ12797 758 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 HERC3Q15034 1050 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 AMHR2Q16671 573 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 DUSP7Q16829 419 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 SPATS1Q496A3 300 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 PDPK2PQ6A1A2 396 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 ZNF425Q6IV72 752 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 KRT74Q7RTS7 529 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 NT5DC3Q86UY8 548 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 ZNF410Q86VK4 478 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 SCUBE3Q8IX30 993 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 KIAA0319LQ8IZA0 1049 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 CARFQ8N187 725 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 ST13P5Q8NFI4 369 aaPredicted RBP12.68□□□□□ -0.38
DDX55-206ENST00000539934 CAPSLQ8WWF8 208 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 NRG4Q8WWG1 115 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 SERPINB12Q96P63 405 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 FAM49AQ9H0Q0 323 aaPredicted RBP12.68□□□□□ -0.38
DDX55-206ENST00000539934 TP63Q9H3D4 680 aaPredicted RBP12.68□□□□□ -0.38
DDX55-206ENST00000539934 PDZD7Q9H5P4 517 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 ELAC1Q9H777 363 aaKnown RBP12.68□□□□□ -0.38
DDX55-206ENST00000539934 MVB12BQ9H7P6 319 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 ERVMER34-1Q9H9K5 563 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 KCNK13Q9HB14 408 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 ANKMY1Q9P2S6 941 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 SPATA2Q9UM82 520 aa12.68□□□□□ -0.38
DDX55-206ENST00000539934 NRCAMQ92823 1304 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 A0A0A6YYJ9 748 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 A0A1B0GTQ1 180 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 OR6C74A6NCV1 312 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 CCDC160A6NGH7 325 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 A6NL46 340 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 SLCO1B7G3V0H7 640 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 H3BRJ5 948 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 CES2O00748 559 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 BRINP1O60477 761 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 OPHN1O60890 802 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 STAG3L1P0CL83 205 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 SMIM10L2AP0DMW4 78 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 SMIM10L2BP0DMW5 78 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 C7P10643 843 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 GNA15P30679 374 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 RRM2P31350 389 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 TALDO1P37837 337 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 GPX6P59796 221 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 RNASE9P60153 205 aaKnown RBP12.67□□□□□ -0.38
DDX55-206ENST00000539934 PHC1P78364 1004 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 EFHC1Q5JVL4 640 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 ACAD10Q6JQN1 1059 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 TMEM192Q8IY95 271 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 KIAA2013Q8IYS2 634 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 PPP4R1Q8TF05 950 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 ADPGKQ9BRR6 497 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 RRN3Q9NYV6 651 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 FARP1Q9Y4F1 1045 aaPredicted RBP12.67□□□□□ -0.38
DDX55-206ENST00000539934 ZNF318Q5VUA4 2279 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 SCN10AQ9Y5Y9 1956 aa12.67□□□□□ -0.38
DDX55-206ENST00000539934 LINC01553A4QN01 128 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 KRT19P08727 400 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 PCSK6P29122 969 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 GALNSP34059 522 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 HTR7P34969 479 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 RFC1P35251 1148 aaPredicted RBP12.66□□□□□ -0.38
DDX55-206ENST00000539934 CCR10P46092 362 aa12.66□□□□□ -0.38
DDX55-206ENST00000539934 RNF4P78317 190 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms