RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 C1QTNF1Q9BXJ1 281 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 ILKAPQ9H0C8 392 aaPredicted RBP10.22□□□□□ -0.77
SPARC-209ENST00000539687 CCDC68Q9H2F9 335 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 EML4Q9HC35 981 aaKnown RBP10.22□□□□□ -0.77
SPARC-209ENST00000539687 SYTL2Q9HCH5 934 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 GKN1Q9NS71 199 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 KLC4Q9NSK0 619 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 CATSPERZQ9NTU4 200 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.22□□□□□ -0.77
SPARC-209ENST00000539687 NLE1Q9NVX2 485 aaPredicted RBP10.22□□□□□ -0.77
SPARC-209ENST00000539687 NCKIPSDQ9NZQ3 722 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 SLC2A6Q9UGQ3 507 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 VPS28Q9UK41 221 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 TMCO1Q9UM00 188 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 ARHGAP26Q9UNA1 814 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 TRIM33Q9UPN9 1127 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 RUVBL2Q9Y230 463 aaKnown RBP10.22□□□□□ -0.77
SPARC-209ENST00000539687 DNAJC16Q9Y2G8 782 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 VWA7Q9Y334 891 aa10.22□□□□□ -0.77
SPARC-209ENST00000539687 E2F8A0AVK6 867 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 G3V2L1 256 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 GFRA2O00451 464 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 FCHO1O14526 889 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 CD3EAPO15446 510 aaKnown RBP10.21□□□□□ -0.77
SPARC-209ENST00000539687 SOCS5O75159 536 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 WFS1O76024 890 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 TMCC1O94876 653 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 POU2F2P09086 479 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 EZRP15311 586 aaKnown RBP10.21□□□□□ -0.77
SPARC-209ENST00000539687 LPOP22079 712 aaPredicted RBP10.21□□□□□ -0.77
SPARC-209ENST00000539687 GABRB3P28472 473 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 SERPINB3P29508 390 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 SLC8A1P32418 973 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 SCNN1BP51168 640 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 RHOAP61586 193 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 ARF5P84085 180 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 RCN2Q14257 317 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 ACAP2Q15057 778 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 CYTH1Q15438 398 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 TYSND1Q2T9J0 566 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 PPM1LQ5SGD2 360 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 HECTD2Q5U5R9 776 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 PDE12Q6L8Q7 609 aaKnown RBP10.21□□□□□ -0.77
SPARC-209ENST00000539687 NCEH1Q6PIU2 408 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 KDELC2Q7Z4H8 507 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 GLT6D1Q7Z4J2 308 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 TMEM150AQ86TG1 271 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 DENND6AQ8IWF6 608 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 STK40Q8N2I9 435 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 ARL14EPQ8N8R7 260 aaPredicted RBP10.21□□□□□ -0.77
SPARC-209ENST00000539687 TDRD5Q8NAT2 981 aaKnown RBP10.21□□□□□ -0.77
SPARC-209ENST00000539687 KREMEN2Q8NCW0 462 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 OR4L1Q8NH43 312 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 DDI1Q8WTU0 396 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 HDAC10Q969S8 669 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 MYEOVQ96EZ4 313 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 THOC1Q96FV9 657 aaKnown RBP10.21□□□□□ -0.77
SPARC-209ENST00000539687 CNDP1Q96KN2 507 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 ASB2Q96Q27 587 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 OMDQ99983 421 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 TRMOQ9BU70 441 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 DRC3Q9H069 523 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 MMADHCQ9H3L0 296 aaPredicted RBP10.21□□□□□ -0.77
SPARC-209ENST00000539687 CAB39LQ9H9S4 337 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 KCNK13Q9HB14 408 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 NOD2Q9HC29 1040 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 GPAMQ9HCL2 828 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 SMPD4Q9NXE4 827 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 GGT7Q9UJ14 662 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 HAO1Q9UJM8 370 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 RAP2CQ9Y3L5 183 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 RAI2Q9Y5P3 530 aa10.21□□□□□ -0.77
SPARC-209ENST00000539687 NUP205Q92621 2012 aa10.21□□□□□ -0.78
SPARC-209ENST00000539687 CCDC78A2IDD5 438 aa10.2□□□□□ -0.78
SPARC-209ENST00000539687 GOLGA8TH3BQL2 631 aa10.2□□□□□ -0.78
SPARC-209ENST00000539687 H7C0S8 307 aa10.2□□□□□ -0.78
SPARC-209ENST00000539687 MUSKO15146 869 aa10.2□□□□□ -0.78
SPARC-209ENST00000539687 SLC22A2O15244 555 aa10.2□□□□□ -0.78
SPARC-209ENST00000539687 PHGDHO43175 533 aaKnown RBP10.2□□□□□ -0.78
SPARC-209ENST00000539687 MGRN1O60291 552 aa10.2□□□□□ -0.78
SPARC-209ENST00000539687 TSPAN3O60637 253 aa10.2□□□□□ -0.78
SPARC-209ENST00000539687 XYLBO75191 536 aa10.2□□□□□ -0.78
SPARC-209ENST00000539687 IGSF6O95976 241 aa10.2□□□□□ -0.78
SPARC-209ENST00000539687 PRKCGP05129 697 aa10.2□□□□□ -0.78
SPARC-209ENST00000539687 PYGLP06737 847 aa10.2□□□□□ -0.78
SPARC-209ENST00000539687 HNRNPA1P09651 372 aaKnown RBP eCLIP10.2□□□□□ -0.78
SPARC-209ENST00000539687 ESRRAP11474 423 aaPredicted RBP10.2□□□□□ -0.78
SPARC-209ENST00000539687 SAT1P21673 171 aa10.2□□□□□ -0.78
SPARC-209ENST00000539687 CD9P21926 228 aa10.2□□□□□ -0.78
SPARC-209ENST00000539687 ADSLP30566 484 aaPredicted RBP10.2□□□□□ -0.78
SPARC-209ENST00000539687 TTPAP49638 278 aa10.2□□□□□ -0.78
SPARC-209ENST00000539687 SUOXP51687 545 aa10.2□□□□□ -0.78
SPARC-209ENST00000539687 ZNF140P52738 457 aaPredicted RBP10.2□□□□□ -0.78
SPARC-209ENST00000539687 STC1P52823 247 aa10.2□□□□□ -0.78
SPARC-209ENST00000539687 PLK1P53350 603 aa10.2□□□□□ -0.78
SPARC-209ENST00000539687 EPHA5P54756 1037 aa10.2□□□□□ -0.78
SPARC-209ENST00000539687 TAS2R39P59534 338 aa10.2□□□□□ -0.78
SPARC-209ENST00000539687 ELF3P78545 371 aaPredicted RBP10.2□□□□□ -0.78
SPARC-209ENST00000539687 GALNT1Q10472 559 aaPredicted RBP10.2□□□□□ -0.78
SPARC-209ENST00000539687 GALNT3Q14435 633 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms