RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 SMIM14Q96QK8 99 aa14.22□□□□□ -0.13
CD4-208ENST00000538827 EBNA1BP2Q99848 306 aaKnown RBP14.22□□□□□ -0.13
CD4-208ENST00000538827 OSBPL1AQ9BXW6 950 aa14.22□□□□□ -0.13
CD4-208ENST00000538827 CPEB1Q9BZB8 566 aaKnown RBP14.22□□□□□ -0.13
CD4-208ENST00000538827 SUV39H2Q9H5I1 410 aa14.22□□□□□ -0.13
CD4-208ENST00000538827 SOX13Q9UN79 622 aa14.22□□□□□ -0.13
CD4-208ENST00000538827 STARD13Q9Y3M8 1113 aa14.22□□□□□ -0.13
CD4-208ENST00000538827 ACACBO00763 2458 aa14.22□□□□□ -0.13
CD4-208ENST00000538827 HEATR9A2RTY3 570 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 C1QTNF3-AMACRE9PGA6 284 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 TRAFD1O14545 582 aaPredicted RBP14.21□□□□□ -0.13
CD4-208ENST00000538827 HTRA2O43464 458 aaPredicted RBP14.21□□□□□ -0.13
CD4-208ENST00000538827 FZD6O60353 706 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 TTC4O95801 387 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 PDGFBP01127 241 aaPredicted RBP14.21□□□□□ -0.13
CD4-208ENST00000538827 PRLP01236 227 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 IL1BP01584 269 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 EPOP01588 193 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 ALPIP09923 528 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 SSTR1P30872 391 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 NTSR1P30989 418 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 SLC8A1P32418 973 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 PHBP35232 272 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 PRKCQQ04759 706 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 UBXN2BQ14CS0 331 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 PCID2Q5JVF3 399 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 CES3Q6UWW8 571 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 ZNF852Q6ZMS4 543 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 HDXQ7Z353 690 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 GLT6D1Q7Z4J2 308 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 ZSWIM9Q86XI8 627 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 RELL1Q8IUW5 271 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 TMEM105Q8N8V8 129 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 RPLP0P6Q8NHW5 317 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 PIP4K2CQ8TBX8 421 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 ZNF641Q96N77 438 aaPredicted RBP14.21□□□□□ -0.13
CD4-208ENST00000538827 CNTNAP3BQ96NU0 1288 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 RUFY1Q96T51 708 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 CNTNAP3Q9BZ76 1288 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 PABPC3Q9H361 631 aaKnown RBP14.21□□□□□ -0.13
CD4-208ENST00000538827 ARNT2Q9HBZ2 717 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 PRSS16Q9NQE7 514 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 DYRK4Q9NR20 520 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.21□□□□□ -0.13
CD4-208ENST00000538827 ZNF711Q9Y462 761 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 TCAF1Q9Y4C2 921 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 SPO11Q9Y5K1 396 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 SCN8AQ9UQD0 1980 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 DMXL1Q9Y485 3027 aa14.21□□□□□ -0.13
CD4-208ENST00000538827 F5P12259 2224 aa14.21□□□□□ -0.14
CD4-208ENST00000538827 A0A087WUV0 522 aaPredicted RBP14.2□□□□□ -0.14
CD4-208ENST00000538827 CAPN8A6NHC0 703 aa14.2□□□□□ -0.14
CD4-208ENST00000538827 ADRA1DP25100 572 aa14.2□□□□□ -0.14
CD4-208ENST00000538827 ABL2P42684 1182 aa14.2□□□□□ -0.14
CD4-208ENST00000538827 GPX6P59796 221 aa14.2□□□□□ -0.14
CD4-208ENST00000538827 RPL26P61254 145 aaKnown RBP14.2□□□□□ -0.14
CD4-208ENST00000538827 MRPS21P82921 87 aaKnown RBP14.2□□□□□ -0.14
CD4-208ENST00000538827 IFFO1Q0D2I5 559 aa14.2□□□□□ -0.14
CD4-208ENST00000538827 FBXO43Q4G163 708 aa14.2□□□□□ -0.14
CD4-208ENST00000538827 UNC5AQ6ZN44 842 aa14.2□□□□□ -0.14
CD4-208ENST00000538827 USP45Q70EL2 814 aa14.2□□□□□ -0.14
CD4-208ENST00000538827 RASSF3Q86WH2 238 aa14.2□□□□□ -0.14
CD4-208ENST00000538827 MMAAQ8IVH4 418 aaKnown RBP14.2□□□□□ -0.14
CD4-208ENST00000538827 NDUFAF2Q8N183 169 aa14.2□□□□□ -0.14
CD4-208ENST00000538827 SIX5Q8N196 739 aa14.2□□□□□ -0.14
CD4-208ENST00000538827 IL17RCQ8NAC3 791 aa14.2□□□□□ -0.14
CD4-208ENST00000538827 PIH1D2Q8WWB5 315 aa14.2□□□□□ -0.14
CD4-208ENST00000538827 LRIG1Q96JA1 1093 aa14.2□□□□□ -0.14
CD4-208ENST00000538827 NAT9Q9BTE0 207 aa14.2□□□□□ -0.14
CD4-208ENST00000538827 LRRC4CQ9HCJ2 640 aa14.2□□□□□ -0.14
CD4-208ENST00000538827 PHTF1Q9UMS5 762 aa14.2□□□□□ -0.14
CD4-208ENST00000538827 RPL26L1Q9UNX3 145 aaKnown RBP14.2□□□□□ -0.14
CD4-208ENST00000538827 PLAAQ9Y263 795 aa14.2□□□□□ -0.14
CD4-208ENST00000538827 RPS6KL1Q9Y6S9 549 aa14.2□□□□□ -0.14
CD4-208ENST00000538827 A0A1W2PQ67 120 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 SHISA7A6NL88 538 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 SMIM23A6NLE4 172 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 UPK3BL1B0FP48 263 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 ANKRD66B4E2M5 251 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 UPK3BL2E5RIL1 263 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 BUD23O43709 281 aaKnown RBP14.19□□□□□ -0.14
CD4-208ENST00000538827 RNASEH1O60930 286 aaKnown RBP14.19□□□□□ -0.14
CD4-208ENST00000538827 SPAG6O75602 509 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 CRTAMO95727 393 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 POLBP06746 335 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 NMBRP28336 390 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 STX2P32856 288 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 CLCN5P51795 746 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 METAP1P53582 386 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 TMPRSS15P98073 1019 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 SEMG2Q02383 582 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 LRRC32Q14392 662 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 SLC29A2Q14542 456 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 CRYMQ14894 314 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 PTPRRQ15256 657 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 ZNF805Q5CZA5 627 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 SPANXN3Q5MJ09 141 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 SPDYCQ5MJ68 293 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 EOGTQ5NDL2 527 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 PKN3Q6P5Z2 889 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms