RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 HECTD3Q5T447 861 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 TPGS2Q68CL5 300 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 ZNF549Q6P9A3 640 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 TRIM67Q6ZTA4 783 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 FRMD7Q6ZUT3 714 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 PELI3Q8N2H9 469 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 SPATA6LQ8N4H0 392 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 POU5F2Q8N7G0 328 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 KCNV2Q8TDN2 545 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 ZNF296Q8WUU4 475 aaPredicted RBP9.35□□□□□ -0.91
UBE3B-207ENST00000537063 ANKRD49Q8WVL7 239 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 L3HYPDHQ96EM0 354 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 THTPAQ9BU02 230 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 KLF16Q9BXK1 252 aaPredicted RBP9.35□□□□□ -0.91
UBE3B-207ENST00000537063 MAN1C1Q9NR34 630 aa9.35□□□□□ -0.91
UBE3B-207ENST00000537063 DENND4CQ5VZ89 1909 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 H0Y3Z8 333 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 CIB2O75838 187 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 IPO13O94829 963 aaKnown RBP9.34□□□□□ -0.91
UBE3B-207ENST00000537063 F11P03951 625 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 SERPINF2P08697 491 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 KCNA5P22460 613 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 OR1D2P34982 312 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 SLC25A3Q00325 362 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 CSHL1Q14406 222 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 ADGRG6Q86SQ4 1221 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 CFAP52Q8N1V2 620 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 IFT43Q96FT9 208 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 SCLYQ96I15 445 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 RSRC1Q96IZ7 334 aaKnown RBP9.34□□□□□ -0.91
UBE3B-207ENST00000537063 ZNF333Q96JL9 665 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 NLE1Q9NVX2 485 aaPredicted RBP9.34□□□□□ -0.91
UBE3B-207ENST00000537063 ARL5AQ9Y689 179 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 GFRA2O00451 464 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 LATS1O95835 1130 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 GOT2P00505 430 aaKnown RBP9.34□□□□□ -0.91
UBE3B-207ENST00000537063 JUNP05412 331 aaKnown RBP9.34□□□□□ -0.91
UBE3B-207ENST00000537063 ACADSP16219 412 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 NCF2P19878 526 aaPredicted RBP9.34□□□□□ -0.91
UBE3B-207ENST00000537063 CES1P23141 567 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 PPARGP37231 505 aaPredicted RBP9.34□□□□□ -0.91
UBE3B-207ENST00000537063 VHLP40337 213 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 SGSHP51688 502 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 INHBCP55103 352 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 SULT2A1Q06520 285 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 SEMA3AQ14563 771 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 ZNF783Q6ZMS7 281 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 PTAR1Q7Z6K3 402 aaPredicted RBP9.34□□□□□ -0.91
UBE3B-207ENST00000537063 ZNF354CQ86Y25 554 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 OR7D4Q8NG98 312 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 DNAJC1Q96KC8 554 aaKnown RBP9.34□□□□□ -0.91
UBE3B-207ENST00000537063 HERC2P3Q9BVR0 1158 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 WDR55Q9H6Y2 383 aaPredicted RBP9.34□□□□□ -0.91
UBE3B-207ENST00000537063 RC3H2Q9HBD1 1191 aaKnown RBP9.34□□□□□ -0.91
UBE3B-207ENST00000537063 POLR3BQ9NW08 1133 aaPredicted RBP9.34□□□□□ -0.91
UBE3B-207ENST00000537063 UBA2Q9UBT2 640 aaPredicted RBP9.34□□□□□ -0.91
UBE3B-207ENST00000537063 CDYLQ9Y232 598 aa9.34□□□□□ -0.91
UBE3B-207ENST00000537063 ARIH1Q9Y4X5 557 aaPredicted RBP9.34□□□□□ -0.91
UBE3B-207ENST00000537063 A0A1B0GVM2 712 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 TCAF2A6NFQ2 919 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 CD3EAPO15446 510 aaKnown RBP9.33□□□□□ -0.92
UBE3B-207ENST00000537063 PRLP01236 227 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 SOD2P04179 222 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 CCDC166P0CW27 439 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 RPL17P18621 184 aaKnown RBP9.33□□□□□ -0.92
UBE3B-207ENST00000537063 ATP6V1C1P21283 382 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 PIK3R1P27986 724 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 ELF1P32519 619 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 RGRP47804 291 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 PPP3CCP48454 512 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 PRAMEP78395 509 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 RALGPS1Q5JS13 557 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 CXorf57Q6NSI4 855 aaKnown RBP9.33□□□□□ -0.92
UBE3B-207ENST00000537063 KLC3Q6P597 504 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 AAGABQ6PD74 315 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 ACAD11Q709F0 780 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 CHSY3Q70JA7 882 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 SLC22A9Q8IVM8 553 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 BBS5Q8N3I7 341 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 ZNF461Q8TAF7 563 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 STMN2Q93045 179 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 FAR2Q96K12 515 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 ZFRQ96KR1 1074 aaKnown RBP9.33□□□□□ -0.92
UBE3B-207ENST00000537063 TBATAQ96M53 351 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 OSBPL1AQ9BXW6 950 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 HIPK3Q9H422 1215 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 INTS10Q9NVR2 710 aaKnown RBP9.33□□□□□ -0.92
UBE3B-207ENST00000537063 CDH22Q9UJ99 828 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 VPS28Q9UK41 221 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 SCN8AQ9UQD0 1980 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 CCDC162PA2VCL2 907 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 OR51F1A6NGY5 319 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 TRPC5OSA6NMA1 111 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 SDHDO14521 159 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 ALDH7A1P49419 539 aaKnown RBP9.33□□□□□ -0.92
UBE3B-207ENST00000537063 STC1P52823 247 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 OXCT1P55809 520 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 RPS24P62847 133 aaKnown RBP9.33□□□□□ -0.92
UBE3B-207ENST00000537063 GALNT3Q14435 633 aa9.33□□□□□ -0.92
UBE3B-207ENST00000537063 CYTH1Q15438 398 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms