RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 SIGIRRQ6IA17 410 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 ERMP1Q7Z2K6 904 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 SLC7A14Q8TBB6 771 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 DNAJB14Q8TBM8 379 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 NXNL1Q96CM4 212 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 TWNKQ96RR1 684 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 DHRS9Q9BPW9 319 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 HOPXQ9BPY8 73 aaPredicted RBP5.42□□□□□ -1.54
PTPRD-213ENST00000537002 FBXO9Q9UK97 447 aaPredicted RBP5.42□□□□□ -1.54
PTPRD-213ENST00000537002 VANGL2Q9ULK5 521 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 hCG_1818297A0A087WSY0 165 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 PSMD3O43242 534 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 RGS20O76081 388 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 FUCA1P04066 466 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 SNRPB2P08579 225 aaKnown RBP5.42□□□□□ -1.54
PTPRD-213ENST00000537002 NAMPTP43490 491 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 NPTX2P47972 431 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 FOXM1Q08050 763 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 TP53BP2Q13625 1128 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 FRG1Q14331 258 aaKnown RBP5.42□□□□□ -1.54
PTPRD-213ENST00000537002 ANGPT1Q15389 498 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 CA9Q16790 459 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 PYDC2Q56P42 97 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 PIGGQ5H8A4 983 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 COQ5Q5HYK3 327 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 FAM45BPQ6NSW5 357 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 ZNF767PQ75MW2 155 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 DSELQ8IZU8 1212 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 KBTBD8Q8NFY9 601 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 SETD6Q8TBK2 473 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 HAS1Q92839 578 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 NARS2Q96I59 477 aaKnown RBP5.42□□□□□ -1.54
PTPRD-213ENST00000537002 KCNH7Q9NS40 1196 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 NUDT5Q9UKK9 219 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 CDH9Q9ULB4 789 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 A0A1W2PPW3 197 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 C5orf58C9J3I9 102 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 TRIM3O75382 744 aaPredicted RBP5.42□□□□□ -1.54
PTPRD-213ENST00000537002 CPNE6O95741 557 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 CRYZL1O95825 349 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 NDUFB10O96000 172 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 KDELR1P24390 212 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 NAGLUP54802 743 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 CNTN2Q02246 1040 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 CACNB2Q08289 660 aaPredicted RBP5.42□□□□□ -1.54
PTPRD-213ENST00000537002 SDE2Q6IQ49 451 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 APOBEC3FQ8IUX4 373 aaKnown RBP5.42□□□□□ -1.54
PTPRD-213ENST00000537002 TBC1D21Q8IYX1 336 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 NAT8LQ8N9F0 302 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 TSPEARQ8WU66 669 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 LPGAT1Q92604 370 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 TMCO6Q96DC7 493 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 SIPA1Q96FS4 1042 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 UGT2B28Q9BY64 529 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 PRRG3Q9BZD7 231 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 MPP6Q9NZW5 540 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 KCNU1A8MYU2 1149 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 FAM25EA8MYX2 175 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 TGFB1I1O43294 461 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 HTRA2O43464 458 aaPredicted RBP5.42□□□□□ -1.54
PTPRD-213ENST00000537002 PMPCBO75439 489 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 ADRB2P07550 413 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 RBP1P09455 135 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 ZNF45Q02386 682 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 NFE2Q16621 373 aaPredicted RBP5.42□□□□□ -1.54
PTPRD-213ENST00000537002 CACHD1Q5VU97 1274 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 CMC1Q7Z7K0 106 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 BBS7Q8IWZ6 715 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 OR13F1Q8NGS4 319 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 LRRC20Q8TCA0 184 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 KCTD4Q8WVF5 259 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 CGRRF1Q99675 332 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 MXRA8Q9BRK3 442 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 TARS2Q9BW92 718 aaKnown RBP5.42□□□□□ -1.54
PTPRD-213ENST00000537002 WDR70Q9NW82 654 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 UBA2Q9UBT2 640 aaPredicted RBP5.42□□□□□ -1.54
PTPRD-213ENST00000537002 HPRP00739 348 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 TPSB2P20231 275 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 LEPRP48357 1165 aaKnown RBP5.42□□□□□ -1.54
PTPRD-213ENST00000537002 IDH3AP50213 366 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 CSNK2BP67870 215 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 PRKCEQ02156 737 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 MADCAM1Q13477 382 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 TPSAB1Q15661 275 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 TAB1Q15750 504 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 ARHGAP36Q6ZRI8 547 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 ZNF605Q86T29 641 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 AMER2Q8N7J2 671 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 PABPC5Q96DU9 382 aaKnown RBP5.42□□□□□ -1.54
PTPRD-213ENST00000537002 MAST2Q6P0Q8 1798 aa5.42□□□□□ -1.54
PTPRD-213ENST00000537002 ZNF487B1APH4 448 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 EIF3FO00303 357 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 PLIN3O60664 434 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 SOAT2O75908 522 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 CPSF4O95639 269 aaKnown RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 MT-ND1P03886 318 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 SPATA31D3P0C874 917 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 XPAP23025 273 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 KRT20P35900 424 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 TAGLNQ01995 201 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms