RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 SPON2Q9BUD6 331 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 VN1R3Q9BXE9 311 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 SCUBE2Q9NQ36 999 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 TCF7L2Q9NQB0 619 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 PRR5-ARHGAP8B1AHC4 643 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 LIN7AO14910 233 aaPredicted RBP13.63□□□□□ -0.23
SMG6-203ENST00000536871 CD3EAPO15446 510 aaKnown RBP13.63□□□□□ -0.23
SMG6-203ENST00000536871 DLX3O60479 287 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 TM7SF2O76062 418 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 SBK3P0C264 359 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 AVPR1AP37288 418 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 CLNS1AP54105 237 aaKnown RBP13.63□□□□□ -0.23
SMG6-203ENST00000536871 NAGLUP54802 743 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 MXRA7P84157 204 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 ARHGAP8P85298 464 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 PFKPQ01813 784 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 TYSND1Q2T9J0 566 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 TECRLQ5HYJ1 363 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 RFWD3Q6PCD5 774 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 NAPRTQ6XQN6 538 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 PTAR1Q7Z6K3 402 aaPredicted RBP13.63□□□□□ -0.23
SMG6-203ENST00000536871 CFAP52Q8N1V2 620 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 OR4L1Q8NH43 312 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 HEXDCQ8WVB3 486 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 STMN2Q93045 179 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 DENND2DQ9H6A0 471 aaPredicted RBP13.63□□□□□ -0.23
SMG6-203ENST00000536871 SYTL2Q9HCH5 934 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 MRPL17Q9NRX2 175 aaKnown RBP13.63□□□□□ -0.23
SMG6-203ENST00000536871 IGSF5Q9NSI5 407 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 CATSPERZQ9NTU4 200 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 NLE1Q9NVX2 485 aaPredicted RBP13.63□□□□□ -0.23
SMG6-203ENST00000536871 NDE1Q9NXR1 346 aa13.63□□□□□ -0.23
SMG6-203ENST00000536871 AGO1Q9UL18 857 aaKnown RBP13.63□□□□□ -0.23
SMG6-203ENST00000536871 A0A0D9SEW6 157 aa13.62□□□□□ -0.23
SMG6-203ENST00000536871 E2F8A0AVK6 867 aa13.62□□□□□ -0.23
SMG6-203ENST00000536871 PIGNO95427 931 aa13.62□□□□□ -0.23
SMG6-203ENST00000536871 CLTBP09497 229 aa13.62□□□□□ -0.23
SMG6-203ENST00000536871 RPL17P18621 184 aaKnown RBP13.62□□□□□ -0.23
SMG6-203ENST00000536871 TFEBP19484 476 aa13.62□□□□□ -0.23
SMG6-203ENST00000536871 SUOXP51687 545 aa13.62□□□□□ -0.23
SMG6-203ENST00000536871 NFKB2Q00653 900 aa13.62□□□□□ -0.23
SMG6-203ENST00000536871 ARL13AQ5H913 290 aaPredicted RBP13.62□□□□□ -0.23
SMG6-203ENST00000536871 MAVSQ7Z434 540 aa13.62□□□□□ -0.23
SMG6-203ENST00000536871 DNAJB7Q7Z6W7 309 aaPredicted RBP13.62□□□□□ -0.23
SMG6-203ENST00000536871 OR7D4Q8NG98 312 aa13.62□□□□□ -0.23
SMG6-203ENST00000536871 BLOC1S5Q8TDH9 187 aa13.62□□□□□ -0.23
SMG6-203ENST00000536871 PRR11Q96HE9 360 aaPredicted RBP13.62□□□□□ -0.23
SMG6-203ENST00000536871 PRICKLE1Q96MT3 831 aaPredicted RBP13.62□□□□□ -0.23
SMG6-203ENST00000536871 MUC3BQ9H195 1237 aa13.62□□□□□ -0.23
SMG6-203ENST00000536871 STOML1Q9UBI4 398 aa13.62□□□□□ -0.23
SMG6-203ENST00000536871 LSM7Q9UK45 103 aaKnown RBP13.62□□□□□ -0.23
SMG6-203ENST00000536871 CDYLQ9Y232 598 aa13.62□□□□□ -0.23
SMG6-203ENST00000536871 COMMD10Q9Y6G5 202 aa13.62□□□□□ -0.23
SMG6-203ENST00000536871 A8MUI8 341 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 MUSKO15146 869 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 PEX11AO75192 247 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 BAIAP3O94812 1187 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 IPO13O94829 963 aaKnown RBP13.61□□□□□ -0.23
SMG6-203ENST00000536871 WISP3O95389 354 aaPredicted RBP13.61□□□□□ -0.23
SMG6-203ENST00000536871 OLFM2O95897 454 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 KLKB1P03952 638 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 THRAP10827 490 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 MBL2P11226 248 aaPredicted RBP13.61□□□□□ -0.23
SMG6-203ENST00000536871 CD9P21926 228 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 FDXRP22570 491 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 GLDCP23378 1020 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 PMLP29590 882 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 ARRB2P32121 409 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 GCKP35557 465 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 MAPK8P45983 427 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 GLRBP48167 497 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 RPS24P62847 133 aaKnown RBP13.61□□□□□ -0.23
SMG6-203ENST00000536871 KDSRQ06136 332 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 CSHL1Q14406 222 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 AARS2Q5JTZ9 985 aaKnown RBP13.61□□□□□ -0.23
SMG6-203ENST00000536871 MFSD6LQ8IWD5 586 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 SCUBE1Q8IWY4 988 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 RBM15BQ8NDT2 890 aaKnown RBP13.61□□□□□ -0.23
SMG6-203ENST00000536871 RHEBL1Q8TAI7 183 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 FAM210AQ96ND0 272 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 TDRD1Q9BXT4 1180 aaKnown RBP13.61□□□□□ -0.23
SMG6-203ENST00000536871 CCDC68Q9H2F9 335 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 RC3H2Q9HBD1 1191 aaKnown RBP13.61□□□□□ -0.23
SMG6-203ENST00000536871 INSL5Q9Y5Q6 135 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.61□□□□□ -0.23
SMG6-203ENST00000536871 SMIM24O75264 130 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 ANP32DO95626 131 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 GOT2P00505 430 aaKnown RBP13.61□□□□□ -0.23
SMG6-203ENST00000536871 CCDC166P0CW27 439 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 NCF2P19878 526 aaPredicted RBP13.61□□□□□ -0.23
SMG6-203ENST00000536871 STC1P52823 247 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 TWF1Q12792 350 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 HERC3Q15034 1050 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 AP1ARQ63HQ0 302 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 TRIM67Q6ZTA4 783 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 CPSF7Q8N684 471 aaKnown RBP13.61□□□□□ -0.23
SMG6-203ENST00000536871 RNF217Q8TC41 542 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 RMDN1Q96DB5 314 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 MYEOVQ96EZ4 313 aa13.61□□□□□ -0.23
SMG6-203ENST00000536871 CDKN2AIPNLQ96HQ2 116 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms