RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 ZNF540Q8NDQ6 660 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 SPATA13Q96N96 652 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 ZYG11BQ9C0D3 744 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 ABCG4Q9H172 646 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 VPS51Q9UID3 782 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 GNPTGQ9UJJ9 305 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 SALL3Q9BXA9 1300 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 CCDC182A6NF36 153 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 MAFO75444 373 aaPredicted RBP12.68□□□□□ -0.38
SPG11-203ENST00000535302 ETS2P15036 469 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 ZNF143P52747 638 aaPredicted RBP12.68□□□□□ -0.38
SPG11-203ENST00000535302 PCDH1Q08174 1060 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 NAB1Q13506 487 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 VSIG10LQ86VR7 867 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 PJA1Q8NG27 643 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 UGT2B28Q9BY64 529 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 CD84Q9UIB8 345 aa12.68□□□□□ -0.38
SPG11-203ENST00000535302 MAP2P11137 1827 aaKnown RBP12.68□□□□□ -0.38
SPG11-203ENST00000535302 CPSF4LA6NMK7 179 aaKnown RBP12.67□□□□□ -0.38
SPG11-203ENST00000535302 FCGR1AP12314 374 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 TFEBP19484 476 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 SEC13P55735 322 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 TAS2R41P59536 307 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 SNRPD1P62314 119 aaKnown RBP12.67□□□□□ -0.38
SPG11-203ENST00000535302 NT5DC1Q5TFE4 455 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 TRIM40Q6P9F5 258 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 ALYREFQ86V81 257 aaKnown RBP12.67□□□□□ -0.38
SPG11-203ENST00000535302 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.67□□□□□ -0.38
SPG11-203ENST00000535302 LENG9Q96B70 501 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 PPP1R16AQ96I34 528 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 DSN1Q9H410 356 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 TPRKBQ9Y3C4 175 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 LRRIQ1Q96JM4 1722 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 A0A1W2PQH9 124 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 TLL1O43897 1013 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 OR10H3O60404 316 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 OR7A10O76100 309 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 IFNGR2P38484 337 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 FMO1Q01740 532 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 SP3Q02447 781 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 SLC34A1Q06495 639 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 ZNHIT3Q15649 155 aaPredicted RBP12.67□□□□□ -0.38
SPG11-203ENST00000535302 GET4Q7L5D6 327 aaPredicted RBP12.67□□□□□ -0.38
SPG11-203ENST00000535302 VCPIP1Q96JH7 1222 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 TMEM134Q9H6X4 195 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 CDH9Q9ULB4 789 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 TBC1D24Q9ULP9 559 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 C2orf71A6NGG8 1288 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 CDC40O60508 579 aaKnown RBP eCLIP12.67□□□□□ -0.38
SPG11-203ENST00000535302 RLN1P04808 185 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 CYP3A4P08684 503 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 MPPE1Q53F39 396 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 AMIGO2Q86SJ2 522 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 CHID1Q9BWS9 393 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 CYP1A1P04798 512 aaPredicted RBP12.67□□□□□ -0.38
SPG11-203ENST00000535302 ME2P23368 584 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.67□□□□□ -0.38
SPG11-203ENST00000535302 CES5AQ6NT32 575 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 MSRAQ9UJ68 235 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 BCL9O00512 1426 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 SF3B1O75533 1304 aaKnown RBP eCLIP12.67□□□□□ -0.384e-8■■■■■ 34.5
SPG11-203ENST00000535302 FKBP6O75344 327 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 CXCL14O95715 111 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 C9P02748 559 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 CYP1A2P05177 515 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 ANXA5P08758 320 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 PSMD5Q16401 504 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 PTPRNQ16849 979 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 NRSN1Q8IZ57 195 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 TMEM199Q8N511 208 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 FIBCD1Q8N539 461 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 OR2L5Q8NG80 312 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 SMPDL3BQ92485 455 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 SLC9A6Q92581 669 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 VPS4BO75351 444 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 NDUFV1P49821 464 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 PITRM1Q5JRX3 1037 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 JOSD2Q8TAC2 188 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 OSCP1Q8WVF1 389 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 FGFBP2Q9BYJ0 223 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 CLN6Q9NWW5 311 aa12.67□□□□□ -0.38
SPG11-203ENST00000535302 STX16-NPEPL1H3BU86 382 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 STX16O14662 325 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 SMAD9O15198 467 aaKnown RBP12.66□□□□□ -0.38
SPG11-203ENST00000535302 TMCC2O75069 709 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 GPR107Q5VW38 600 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 TOP1MTQ969P6 601 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 CERS2Q96G23 380 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 FCRL4Q96PJ5 515 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 PRDM12Q9H4Q4 367 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 GMPPBQ9Y5P6 360 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 TRMT5Q32P41 509 aaKnown RBP12.66□□□□□ -0.38
SPG11-203ENST00000535302 ADGRG6Q86SQ4 1221 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 EXOC3L1Q86VI1 746 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 PRSS58Q8IYP2 241 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 ZNF433Q8N7K0 673 aaPredicted RBP12.66□□□□□ -0.38
SPG11-203ENST00000535302 ACTRT2Q8TDY3 377 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 TPK1Q9H3S4 243 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 PIGUQ9H490 435 aa12.66□□□□□ -0.38
SPG11-203ENST00000535302 BRD9Q9H8M2 597 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms