RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 CPXCR1Q8N123 301 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 TMEM57Q8N5G2 664 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 ENGASEQ8NFI3 743 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 MYRIPQ8NFW9 859 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 B4GALNT2Q8NHY0 566 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 CSGALNACT1Q8TDX6 532 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 CCT6BQ92526 530 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 TMEM204Q9BSN7 226 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 SF3B5Q9BWJ5 86 aaKnown RBP3.7□□□□□ -1.82
USP48-215ENST00000534705 SLCO5A1Q9H2Y9 848 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 CATSPERBQ9H7T0 1116 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 PPCSQ9HAB8 311 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 GRHL1Q9NZI5 618 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 SEL1LQ9UBV2 794 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 ZNF69Q9UC07 566 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 FEM1BQ9UK73 627 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 RAI2Q9Y5P3 530 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 CEMIPQ8WUJ3 1361 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 A0A1B0GUL6 1792 aa3.7□□□□□ -1.82
USP48-215ENST00000534705 HBP1O60381 514 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 CNPP09543 421 aaKnown RBP3.69□□□□□ -1.82
USP48-215ENST00000534705 GNLYP22749 145 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 SKIV2L2P42285 1042 aaKnown RBP3.69□□□□□ -1.82
USP48-215ENST00000534705 CASP2P42575 452 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 MTNR1AP48039 350 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 PPM1FP49593 454 aaPredicted RBP3.69□□□□□ -1.82
USP48-215ENST00000534705 ENTPD1P49961 510 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 DDX10Q13206 875 aaKnown RBP3.69□□□□□ -1.82
USP48-215ENST00000534705 ITPK1Q13572 414 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 GPR18Q14330 331 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 LRRC24Q50LG9 513 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 PLEKHO1Q53GL0 409 aaPredicted RBP3.69□□□□□ -1.82
USP48-215ENST00000534705 FBXO47Q5MNV8 452 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 DNTTIP2Q5QJE6 756 aaKnown RBP3.69□□□□□ -1.82
USP48-215ENST00000534705 OTUD1Q5VV17 481 aaPredicted RBP3.69□□□□□ -1.82
USP48-215ENST00000534705 TMEM268Q5VZI3 342 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 TBC1D9BQ66K14 1250 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 HEPHL1Q6MZM0 1159 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 ZNF530Q6P9A1 599 aaPredicted RBP3.69□□□□□ -1.82
USP48-215ENST00000534705 GJB7Q6PEY0 223 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 TMC8Q8IU68 726 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 HERC6Q8IVU3 1022 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 FTSJ3Q8IY81 847 aaKnown RBP3.69□□□□□ -1.82
USP48-215ENST00000534705 LRRC57Q8N9N7 239 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 CMASQ8NFW8 434 aaPredicted RBP3.69□□□□□ -1.82
USP48-215ENST00000534705 AFG1LQ8WV93 481 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 FRAT1Q92837 279 aaPredicted RBP3.69□□□□□ -1.82
USP48-215ENST00000534705 SH3KBP1Q96B97 665 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 MASTLQ96GX5 879 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 URB1-AS1Q96HZ7 61 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 PLEKHF1Q96S99 279 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 HERPUD2Q9BSE4 406 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 FAM167BQ9BTA0 163 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 HIF1ANQ9NWT6 349 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 NCKIPSDQ9NZQ3 722 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 WNT16Q9UBV4 365 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 GTF2A1LQ9UNN4 478 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 CLDN16Q9Y5I7 305 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 SLX4Q8IY92 1834 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 TIAM2Q8IVF5 1701 aa3.69□□□□□ -1.82
USP48-215ENST00000534705 TNRC6CQ9HCJ0 1690 aaKnown RBP3.68□□□□□ -1.82
USP48-215ENST00000534705 ZNF646O15015 1829 aaPredicted RBP3.68□□□□□ -1.82
USP48-215ENST00000534705 PSME4Q14997 1843 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 MAP3K5Q99683 1374 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 MS4A18H0YCH9 400 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 STRNO43815 780 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 NBNO60934 754 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 LCATP04180 440 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 ENO3P13929 434 aaPredicted RBP3.68□□□□□ -1.82
USP48-215ENST00000534705 YWHAQP27348 245 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 ARHGAP8P85298 464 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 BYSLQ13895 437 aaKnown RBP3.68□□□□□ -1.82
USP48-215ENST00000534705 ANKRD1Q15327 319 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 RPE65Q16518 533 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 SYTL3Q4VX76 610 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 ANKRD45Q5TZF3 282 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 DCAF12L2Q5VW00 463 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 ZNF280DQ6N043 979 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 TMEM71Q6P5X7 295 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 SMIM5Q71RC9 77 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 SERPINA11Q86U17 422 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 CADM3Q8N126 398 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 ANKRD44Q8N8A2 993 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 ANKRD42Q8N9B4 389 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 IL17REQ8NFR9 667 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 ASB5Q8WWX0 329 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 MIB2Q96AX9 1013 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 SCLT1Q96NL6 688 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 NPLQ9BXD5 320 aaPredicted RBP3.68□□□□□ -1.82
USP48-215ENST00000534705 DCLK3Q9C098 648 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 CHODLQ9H9P2 273 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 NOD2Q9HC29 1040 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 MAP3K20Q9NYL2 800 aaKnown RBP3.68□□□□□ -1.82
USP48-215ENST00000534705 TMOD3Q9NYL9 352 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 FZD10Q9ULW2 581 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 DHDHQ9UQ10 334 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 DNAJC16Q9Y2G8 782 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 RRP7AQ9Y3A4 280 aaKnown RBP3.68□□□□□ -1.82
USP48-215ENST00000534705 RAP2CQ9Y3L5 183 aa3.68□□□□□ -1.82
USP48-215ENST00000534705 HEG1Q9ULI3 1381 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms