RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 DPY19L3Q6ZPD9 716 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 LINC00523Q86TU6 105 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 TAX1BP1Q86VP1 789 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 ACOX2Q99424 681 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 NKIRAS1Q9NYS0 192 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 SLC8A2Q9UPR5 921 aa18.61■□□□□ 0.57
SMPD1-208ENST00000533123 ANKRD36A6QL64 1941 aa18.6■□□□□ 0.57
SMPD1-208ENST00000533123 TYROBPO43914 113 aa18.6■□□□□ 0.57
SMPD1-208ENST00000533123 CD72P21854 359 aa18.6■□□□□ 0.57
SMPD1-208ENST00000533123 CHRNA4P43681 627 aa18.6■□□□□ 0.57
SMPD1-208ENST00000533123 SEC13P55735 322 aa18.6■□□□□ 0.57
SMPD1-208ENST00000533123 TMEM135Q86UB9 458 aa18.6■□□□□ 0.57
SMPD1-208ENST00000533123 OR2A12Q8NGT7 310 aa18.6■□□□□ 0.57
SMPD1-208ENST00000533123 DYDC1Q8WWB3 177 aa18.6■□□□□ 0.57
SMPD1-208ENST00000533123 CCT8L2Q96SF2 557 aa18.6■□□□□ 0.57
SMPD1-208ENST00000533123 IL22Q9GZX6 179 aa18.6■□□□□ 0.57
SMPD1-208ENST00000533123 ZNF180Q9UJW8 692 aa18.6■□□□□ 0.57
SMPD1-208ENST00000533123 A0A0C4DFX4 3053 aa18.6■□□□□ 0.57
SMPD1-208ENST00000533123 ZCWPW2A0A1B0GU75 182 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 TRIM49D1C9J1S8 452 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 NDUFAB1O14561 156 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 PRPF4O43172 522 aaKnown RBP eCLIP18.59■□□□□ 0.57
SMPD1-208ENST00000533123 MT-ND3P03897 115 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 NPY2RP49146 381 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 VASPP50552 380 aaPredicted RBP18.59■□□□□ 0.57
SMPD1-208ENST00000533123 CCNHP51946 323 aaPredicted RBP18.59■□□□□ 0.57
SMPD1-208ENST00000533123 WDR4P57081 412 aaKnown RBP18.59■□□□□ 0.57
SMPD1-208ENST00000533123 MYLK3Q32MK0 819 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 ANKRD20A4Q4UJ75 823 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 SPANXN3Q5MJ09 141 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 SERPINA13PQ6UXR4 307 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 RANBP10Q6VN20 620 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 CYS1Q717R9 158 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 CAMK1DQ8IU85 385 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 SUGP1Q8IWZ8 645 aaKnown RBP18.59■□□□□ 0.57
SMPD1-208ENST00000533123 SLC25A41Q8N5S1 370 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 CHST14Q8NCH0 376 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 PTPRN2Q92932 1015 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 ZNF778Q96MU6 729 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 CACNA2D2Q9NY47 1150 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 DUSP12Q9UNI6 340 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 CHKBQ9Y259 395 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 STARD13Q9Y3M8 1113 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 RAI2Q9Y5P3 530 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 PSAT1Q9Y617 370 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 HMX2A2RU54 273 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 PIGNO95427 931 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 GSRP00390 522 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 EGFP01133 1207 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 F7P08709 466 aaPredicted RBP18.59■□□□□ 0.57
SMPD1-208ENST00000533123 BMP1P13497 986 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 CA4P22748 312 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 NMBRP28336 390 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 IL12RB1P42701 662 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 CSNK1DP48730 415 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 AP1S1P61966 158 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 POU6F1Q14863 301 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 TMEM196Q5HYL7 178 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 FSTL4Q6MZW2 842 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 RASSF3Q86WH2 238 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 PDCD6IPQ8WUM4 868 aaKnown RBP18.59■□□□□ 0.57
SMPD1-208ENST00000533123 VOPP1Q96AW1 172 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 IFT43Q96FT9 208 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 CERS2Q96G23 380 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 TDRD1Q9BXT4 1180 aaKnown RBP18.59■□□□□ 0.57
SMPD1-208ENST00000533123 TMEM245Q9H330 911 aa18.59■□□□□ 0.57
SMPD1-208ENST00000533123 C12orf65Q9H3J6 166 aaKnown RBP18.59■□□□□ 0.57
SMPD1-208ENST00000533123 THAP10Q9P2Z0 257 aaPredicted RBP18.59■□□□□ 0.57
SMPD1-208ENST00000533123 SHISA7A6NL88 538 aa18.58■□□□□ 0.57
SMPD1-208ENST00000533123 USP1O94782 785 aa18.58■□□□□ 0.57
SMPD1-208ENST00000533123 TNFRSF4P43489 277 aa18.58■□□□□ 0.57
SMPD1-208ENST00000533123 RECQLP46063 649 aaPredicted RBP18.58■□□□□ 0.57
SMPD1-208ENST00000533123 CDK18Q07002 472 aa18.58■□□□□ 0.57
SMPD1-208ENST00000533123 TRAF2Q12933 501 aa18.58■□□□□ 0.57
SMPD1-208ENST00000533123 TPRG1Q6ZUI0 275 aa18.58■□□□□ 0.57
SMPD1-208ENST00000533123 MARK2Q7KZI7 788 aaKnown RBP18.58■□□□□ 0.57
SMPD1-208ENST00000533123 ZNF513Q8N8E2 541 aaPredicted RBP18.58■□□□□ 0.57
SMPD1-208ENST00000533123 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.58■□□□□ 0.57
SMPD1-208ENST00000533123 DENND1AQ8TEH3 1009 aa18.58■□□□□ 0.57
SMPD1-208ENST00000533123 ERLEC1Q96DZ1 483 aa18.58■□□□□ 0.57
SMPD1-208ENST00000533123 ZNF317Q96PQ6 595 aaPredicted RBP18.58■□□□□ 0.57
SMPD1-208ENST00000533123 PAIP2Q9BPZ3 127 aaKnown RBP18.58■□□□□ 0.57
SMPD1-208ENST00000533123 ZDHHC6Q9H6R6 413 aa18.58■□□□□ 0.57
SMPD1-208ENST00000533123 SOX13Q9UN79 622 aa18.58■□□□□ 0.57
SMPD1-208ENST00000533123 SMG5Q9UPR3 1016 aaKnown RBP18.58■□□□□ 0.57
SMPD1-208ENST00000533123 SORCS3Q9UPU3 1222 aa18.58■□□□□ 0.57
SMPD1-208ENST00000533123 MUC3AQ02505 3323 aa18.58■□□□□ 0.57
SMPD1-208ENST00000533123 FAM237BA0A1B0GVD1 139 aa18.58■□□□□ 0.56
SMPD1-208ENST00000533123 LOC285095A0A1B0GVY8 99 aa18.58■□□□□ 0.56
SMPD1-208ENST00000533123 SRRM3A6NNA2 597 aaPredicted RBP18.58■□□□□ 0.56
SMPD1-208ENST00000533123 FAM107AO95990 144 aa18.58■□□□□ 0.56
SMPD1-208ENST00000533123 PDHA1P08559 390 aa18.58■□□□□ 0.56
SMPD1-208ENST00000533123 PYGBP11216 843 aa18.58■□□□□ 0.56
SMPD1-208ENST00000533123 TIE1P35590 1138 aa18.58■□□□□ 0.56
SMPD1-208ENST00000533123 KIR2DL1P43626 348 aaPredicted RBP18.58■□□□□ 0.56
SMPD1-208ENST00000533123 MGAT5Q09328 741 aa18.58■□□□□ 0.56
SMPD1-208ENST00000533123 GRSF1Q12849 480 aaKnown RBP eCLIP18.58■□□□□ 0.56
SMPD1-208ENST00000533123 SLC1A5Q15758 541 aa18.58■□□□□ 0.56
SMPD1-208ENST00000533123 QPCTQ16769 361 aa18.58■□□□□ 0.56
SMPD1-208ENST00000533123 C2orf27AQ580R0 203 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms