RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 OPA1O60313 960 aa17.89■□□□□ 0.45
SMG1-203ENST00000532700 PROSCO94903 275 aa17.89■□□□□ 0.45
SMG1-203ENST00000532700 TSHRP16473 764 aa17.89■□□□□ 0.45
SMG1-203ENST00000532700 TGM2P21980 687 aa17.89■□□□□ 0.45
SMG1-203ENST00000532700 LHCGRP22888 699 aa17.89■□□□□ 0.45
SMG1-203ENST00000532700 SUOXP51687 545 aa17.89■□□□□ 0.45
SMG1-203ENST00000532700 AP1S1P61966 158 aa17.89■□□□□ 0.45
SMG1-203ENST00000532700 YPEL5P62699 121 aa17.89■□□□□ 0.45
SMG1-203ENST00000532700 SLC10A2Q12908 348 aaPredicted RBP17.89■□□□□ 0.45
SMG1-203ENST00000532700 ILKQ13418 452 aa17.89■□□□□ 0.45
SMG1-203ENST00000532700 KRT81Q14533 505 aa17.89■□□□□ 0.45
SMG1-203ENST00000532700 ZNF235Q14590 738 aa17.89■□□□□ 0.45
SMG1-203ENST00000532700 GRM3Q14832 879 aa17.89■□□□□ 0.45
SMG1-203ENST00000532700 AGERQ15109 404 aa17.89■□□□□ 0.45
SMG1-203ENST00000532700 CNGA3Q16281 694 aa17.89■□□□□ 0.45
SMG1-203ENST00000532700 SLC18A3Q16572 532 aa17.89■□□□□ 0.45
SMG1-203ENST00000532700 CDCP2Q5VXM1 449 aa17.89■□□□□ 0.45
SMG1-203ENST00000532700 RFLNAQ6ZTI6 216 aa17.89■□□□□ 0.45
SMG1-203ENST00000532700 ATPAF2Q8N5M1 289 aa17.89■□□□□ 0.45
SMG1-203ENST00000532700 FAM181AQ8N9Y4 354 aa17.89■□□□□ 0.45
SMG1-203ENST00000532700 IFI44Q8TCB0 444 aa17.89■□□□□ 0.45
SMG1-203ENST00000532700 PTCD2Q8WV60 388 aaKnown RBP17.89■□□□□ 0.45
SMG1-203ENST00000532700 NUDCD1Q96RS6 583 aa17.89■□□□□ 0.45
SMG1-203ENST00000532700 LGR4Q9BXB1 951 aa17.89■□□□□ 0.45
SMG1-203ENST00000532700 MRPL40Q9NQ50 206 aaKnown RBP17.89■□□□□ 0.45
SMG1-203ENST00000532700 DONSONQ9NYP3 566 aa17.89■□□□□ 0.45
SMG1-203ENST00000532700 CSNK1G3Q9Y6M4 447 aa17.89■□□□□ 0.45
SMG1-203ENST00000532700 ZFYVE26Q68DK2 2539 aa17.89■□□□□ 0.45
SMG1-203ENST00000532700 A0A1W2PNU3 283 aaPredicted RBP17.88■□□□□ 0.45
SMG1-203ENST00000532700 TMEM202A6NGA9 273 aa17.88■□□□□ 0.45
SMG1-203ENST00000532700 H3BM21 787 aa17.88■□□□□ 0.45
SMG1-203ENST00000532700 MYO1FO00160 1098 aa17.88■□□□□ 0.45
SMG1-203ENST00000532700 YY2O15391 372 aa17.88■□□□□ 0.45
SMG1-203ENST00000532700 LZTS3O60299 673 aaPredicted RBP17.88■□□□□ 0.45
SMG1-203ENST00000532700 MT-CO3P00414 261 aa17.88■□□□□ 0.45
SMG1-203ENST00000532700 PDHA1P08559 390 aa17.88■□□□□ 0.45
SMG1-203ENST00000532700 HNF1BP35680 557 aa17.88■□□□□ 0.45
SMG1-203ENST00000532700 NFATC4Q14934 902 aa17.88■□□□□ 0.45
SMG1-203ENST00000532700 TSR1Q2NL82 804 aaKnown RBP17.88■□□□□ 0.45
SMG1-203ENST00000532700 COL28A1Q2UY09 1125 aa17.88■□□□□ 0.45
SMG1-203ENST00000532700 CFAP58Q5T655 872 aa17.88■□□□□ 0.45
SMG1-203ENST00000532700 FAXCQ5TGI0 409 aa17.88■□□□□ 0.45
SMG1-203ENST00000532700 ZCCHC8Q6NZY4 707 aaKnown RBP17.88■□□□□ 0.45
SMG1-203ENST00000532700 ERAP2Q6P179 960 aa17.88■□□□□ 0.45
SMG1-203ENST00000532700 TSPAN33Q86UF1 283 aa17.88■□□□□ 0.45
SMG1-203ENST00000532700 GAS2L3Q86XJ1 694 aa17.88■□□□□ 0.45
SMG1-203ENST00000532700 HID1Q8IV36 788 aa17.88■□□□□ 0.45
SMG1-203ENST00000532700 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.88■□□□□ 0.45
SMG1-203ENST00000532700 HNRNPLLQ8WVV9 542 aaKnown RBP17.88■□□□□ 0.45
SMG1-203ENST00000532700 OR1E3Q8WZA6 343 aa17.88■□□□□ 0.45
SMG1-203ENST00000532700 RAPGEF5Q92565 580 aa17.88■□□□□ 0.45
SMG1-203ENST00000532700 BOCQ9BWV1 1114 aa17.88■□□□□ 0.45
SMG1-203ENST00000532700 FGF22Q9HCT0 170 aa17.88■□□□□ 0.45
SMG1-203ENST00000532700 NT5MQ9NPB1 228 aa17.88■□□□□ 0.45
SMG1-203ENST00000532700 ABHD10Q9NUJ1 306 aa17.88■□□□□ 0.45
SMG1-203ENST00000532700 LHX6Q9UPM6 363 aa17.88■□□□□ 0.45
SMG1-203ENST00000532700 CLCA2Q9UQC9 943 aa17.88■□□□□ 0.45
SMG1-203ENST00000532700 CPED1A4D0V7 1026 aa17.87■□□□□ 0.45
SMG1-203ENST00000532700 NPIPB15A6NHN6 443 aaPredicted RBP17.87■□□□□ 0.45
SMG1-203ENST00000532700 MFAP3LO75121 409 aa17.87■□□□□ 0.45
SMG1-203ENST00000532700 ELFN1P0C7U0 828 aa17.87■□□□□ 0.45
SMG1-203ENST00000532700 MMP13P45452 471 aa17.87■□□□□ 0.45
SMG1-203ENST00000532700 GBE1Q04446 702 aa17.87■□□□□ 0.45
SMG1-203ENST00000532700 GALNT2Q10471 571 aa17.87■□□□□ 0.45
SMG1-203ENST00000532700 PAFAH1B3Q15102 231 aaKnown RBP17.87■□□□□ 0.45
SMG1-203ENST00000532700 ANKRD20A8PQ5CZ79 823 aa17.87■□□□□ 0.45
SMG1-203ENST00000532700 ENPP7Q6UWV6 458 aa17.87■□□□□ 0.45
SMG1-203ENST00000532700 EFL1Q7Z2Z2 1120 aaKnown RBP17.87■□□□□ 0.45
SMG1-203ENST00000532700 RD3Q7Z3Z2 195 aa17.87■□□□□ 0.45
SMG1-203ENST00000532700 HSD11B1LQ7Z5J1 315 aa17.87■□□□□ 0.45
SMG1-203ENST00000532700 KYQ8NBH2 561 aa17.87■□□□□ 0.45
SMG1-203ENST00000532700 OR8K1Q8NGG5 319 aa17.87■□□□□ 0.45
SMG1-203ENST00000532700 PDCD6IPQ8WUM4 868 aaKnown RBP17.87■□□□□ 0.45
SMG1-203ENST00000532700 COQ10AQ96MF6 247 aa17.87■□□□□ 0.45
SMG1-203ENST00000532700 SCUBE2Q9NQ36 999 aa17.87■□□□□ 0.45
SMG1-203ENST00000532700 ZNHIT6Q9NWK9 470 aaKnown RBP17.87■□□□□ 0.45
SMG1-203ENST00000532700 SPASTQ9UBP0 616 aa17.87■□□□□ 0.45
SMG1-203ENST00000532700 RABGEF1Q9UJ41 708 aa17.87■□□□□ 0.45
SMG1-203ENST00000532700 KIF26BQ2KJY2 2108 aa17.86■□□□□ 0.45
SMG1-203ENST00000532700 NEMP2A6NFY4 417 aa17.86■□□□□ 0.45
SMG1-203ENST00000532700 CPP00450 1065 aa17.86■□□□□ 0.45
SMG1-203ENST00000532700 FUCA1P04066 466 aa17.86■□□□□ 0.45
SMG1-203ENST00000532700 ALPIP09923 528 aa17.86■□□□□ 0.45
SMG1-203ENST00000532700 ALPPL2P10696 532 aa17.86■□□□□ 0.45
SMG1-203ENST00000532700 CTPS1P17812 591 aa17.86■□□□□ 0.45
SMG1-203ENST00000532700 GARSP41250 739 aaKnown RBP17.86■□□□□ 0.45
SMG1-203ENST00000532700 HK3P52790 923 aa17.86■□□□□ 0.45
SMG1-203ENST00000532700 DSC2Q02487 901 aa17.86■□□□□ 0.45
SMG1-203ENST00000532700 PPARDQ03181 441 aa17.86■□□□□ 0.45
SMG1-203ENST00000532700 PTK2BQ14289 1009 aa17.86■□□□□ 0.45
SMG1-203ENST00000532700 CBARPQ8N350 705 aaPredicted RBP17.86■□□□□ 0.45
SMG1-203ENST00000532700 TEX26Q8N6G2 289 aa17.86■□□□□ 0.45
SMG1-203ENST00000532700 SPOCK2Q92563 424 aa17.86■□□□□ 0.45
SMG1-203ENST00000532700 FAF2Q96CS3 445 aa17.86■□□□□ 0.45
SMG1-203ENST00000532700 C1QTNF7Q9BXJ2 289 aa17.86■□□□□ 0.45
SMG1-203ENST00000532700 RCOR3Q9P2K3 495 aaPredicted RBP17.86■□□□□ 0.45
SMG1-203ENST00000532700 HYOU1Q9Y4L1 999 aa17.86■□□□□ 0.45
SMG1-203ENST00000532700 C3orf70A6NLC5 250 aaPredicted RBP17.85■□□□□ 0.45
SMG1-203ENST00000532700 LMO7DNF2Z398 122 aa17.85■□□□□ 0.45
SMG1-203ENST00000532700 BRINP1O60477 761 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms