RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 SLC39A1Q9NY26 324 aa9.3□□□□□ -0.92
NEDD8-206ENST00000531430 GOLGA6CA6NDK9 693 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 GOLGA6BA6NDN3 693 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 ZSCAN5CA6NGD5 496 aaPredicted RBP9.29□□□□□ -0.92
NEDD8-206ENST00000531430 A8MU76 341 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 NKX2-8O15522 239 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 ZW10O43264 779 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 CREB3O43889 395 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 CPNE6O95741 557 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 GOLGA6DP0CG33 693 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 FGF3P11487 239 aaPredicted RBP9.29□□□□□ -0.92
NEDD8-206ENST00000531430 LIFP15018 202 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 PNLIPP16233 465 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 KELP23276 732 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 EPHB2P29323 1055 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 SDC4P31431 198 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 CSTF2P33240 577 aaKnown RBP eCLIP9.29□□□□□ -0.928e-15■■■■□ 21.9
NEDD8-206ENST00000531430 B4GALNT1Q00973 533 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 MTM1Q13496 603 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 ACOX1Q15067 660 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 CYTH1Q15438 398 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 CCDC14Q49A88 953 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 HSP90AA4PQ58FG1 418 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 SNAP47Q5SQN1 464 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 ARTNQ5T4W7 220 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 C16orf46Q6P387 395 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 FOXR2Q6PJQ5 311 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 KDELC2Q7Z4H8 507 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 NLRP14Q86W24 1093 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 FAM129CQ86XR2 697 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 CAMK1DQ8IU85 385 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 SLITRK4Q8IW52 837 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 KIAA1524Q8TCG1 905 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 GPT2Q8TD30 523 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 ZDHHC1Q8WTX9 485 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 ART4Q93070 314 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 FUBP1Q96AE4 644 aaKnown RBP9.29□□□□□ -0.92
NEDD8-206ENST00000531430 CCDC74BQ96LY2 380 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 NUDT22Q9BRQ3 303 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 ADNPQ9H2P0 1102 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 CARS2Q9HA77 564 aaKnown RBP9.29□□□□□ -0.92
NEDD8-206ENST00000531430 SIX2Q9NPC8 291 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 SPATS2LQ9NUQ6 558 aaKnown RBP9.29□□□□□ -0.92
NEDD8-206ENST00000531430 GOLGA6AQ9NYA3 693 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 DKK3Q9UBP4 350 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 TMEM59LQ9UK28 342 aa9.29□□□□□ -0.92
NEDD8-206ENST00000531430 DOCK4Q8N1I0 1966 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 IGHV5-10-1A0A0J9YXX1 117 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 BLACEA4D250 179 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 RASA4BC9J798 803 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 RASA4O43374 803 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 NUDT21O43809 227 aaKnown RBP9.28□□□□□ -0.92
NEDD8-206ENST00000531430 RECQL5O94762 991 aaPredicted RBP9.28□□□□□ -0.92
NEDD8-206ENST00000531430 ECEL1O95672 775 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 MMEP08473 750 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 PRKCSHP14314 528 aaPredicted RBP9.28□□□□□ -0.92
NEDD8-206ENST00000531430 CR2P20023 1033 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 UGT1A3P35503 534 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 SUOXP51687 545 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 FOXK1P85037 733 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 HLTFQ14527 1009 aaKnown RBP eCLIP9.28□□□□□ -0.92
NEDD8-206ENST00000531430 DEFB109BQ30KR1 87 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 INO80DQ53TQ3 878 aaPredicted RBP9.28□□□□□ -0.92
NEDD8-206ENST00000531430 EFHC2Q5JST6 749 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 HIST2H2BCQ6DN03 193 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 SLC30A9Q6PML9 568 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 SLFN11Q7Z7L1 901 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 FAM71AQ8IYT1 594 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 UNC5BQ8IZJ1 945 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 PYROXD2Q8N2H3 581 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 CCDC185Q8N715 623 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 CCDC112Q8NEF3 446 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 JOSD2Q8TAC2 188 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 SLC30A5Q8TAD4 765 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 C9orf43Q8TAL5 461 aaPredicted RBP9.28□□□□□ -0.92
NEDD8-206ENST00000531430 FAM172AQ8WUF8 416 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 CASKIN2Q8WXE0 1202 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 PMEPA1Q969W9 287 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 RNF31Q96EP0 1072 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 AHCYL2Q96HN2 611 aaKnown RBP9.28□□□□□ -0.92
NEDD8-206ENST00000531430 LGR4Q9BXB1 951 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 FGF22Q9HCT0 170 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 OCIAD1Q9NX40 245 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 UBA2Q9UBT2 640 aaPredicted RBP9.28□□□□□ -0.92
NEDD8-206ENST00000531430 PLAAQ9Y263 795 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 MAN2B2Q9Y2E5 1009 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 MFHAS1Q9Y4C4 1052 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 B3GALT1Q9Y5Z6 326 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 DGKBQ9Y6T7 804 aa9.28□□□□□ -0.92
NEDD8-206ENST00000531430 UTP20O75691 2785 aaKnown RBP9.27□□□□□ -0.93
NEDD8-206ENST00000531430 EFCAB7A8K855 629 aa9.27□□□□□ -0.93
NEDD8-206ENST00000531430 ZNF891A8MT65 544 aaPredicted RBP9.27□□□□□ -0.93
NEDD8-206ENST00000531430 J3KR12 359 aa9.27□□□□□ -0.93
NEDD8-206ENST00000531430 PDE2AO00408 941 aaPredicted RBP9.27□□□□□ -0.93
NEDD8-206ENST00000531430 BUB1BO60566 1050 aaPredicted RBP9.27□□□□□ -0.93
NEDD8-206ENST00000531430 RAD1O60671 282 aa9.27□□□□□ -0.93
NEDD8-206ENST00000531430 FGF1P05230 155 aa9.27□□□□□ -0.93
NEDD8-206ENST00000531430 ELFN1P0C7U0 828 aa9.27□□□□□ -0.93
NEDD8-206ENST00000531430 AK4P27144 223 aaPredicted RBP9.27□□□□□ -0.93
NEDD8-206ENST00000531430 CD1CP29017 333 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms