RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 WDR92Q96MX6 357 aa8.3□□□□□ -1.08
CD44-232ENST00000531118 TEFMQ96QE5 360 aaKnown RBP8.3□□□□□ -1.08
CD44-232ENST00000531118 ZSWIM1Q9BR11 485 aa8.3□□□□□ -1.08
CD44-232ENST00000531118 TRIM62Q9BVG3 475 aa8.3□□□□□ -1.08
CD44-232ENST00000531118 ASPSCR1Q9BZE9 553 aa8.3□□□□□ -1.08
CD44-232ENST00000531118 TM6SF2Q9BZW4 377 aa8.3□□□□□ -1.08
CD44-232ENST00000531118 CEP44Q9C0F1 390 aa8.3□□□□□ -1.08
CD44-232ENST00000531118 ZSCAN16Q9H4T2 348 aaPredicted RBP8.3□□□□□ -1.08
CD44-232ENST00000531118 CYP4F12Q9HCS2 524 aa8.3□□□□□ -1.08
CD44-232ENST00000531118 EXOC1Q9NV70 894 aa8.3□□□□□ -1.08
CD44-232ENST00000531118 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.3□□□□□ -1.08
CD44-232ENST00000531118 OCIAD1Q9NX40 245 aa8.3□□□□□ -1.08
CD44-232ENST00000531118 RAB20Q9NX57 234 aa8.3□□□□□ -1.08
CD44-232ENST00000531118 RCOR3Q9P2K3 495 aaPredicted RBP8.3□□□□□ -1.08
CD44-232ENST00000531118 SLC12A6Q9UHW9 1150 aa8.3□□□□□ -1.08
CD44-232ENST00000531118 POLHQ9Y253 713 aa8.3□□□□□ -1.08
CD44-232ENST00000531118 HS3ST4Q9Y661 456 aa8.3□□□□□ -1.08
CD44-232ENST00000531118 SYNJ2BP-COX16A0A087WUM0 186 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 A0A0D9SEW6 157 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 ARHGAP10A1A4S6 786 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 A6NJY4 79 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 TMEM110-MUSTN1A8MSY1 372 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 TCP11X1B4DZS4 312 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 AREL1O15033 823 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 HNRNPRO43390 633 aaKnown RBP8.29□□□□□ -1.08
CD44-232ENST00000531118 B4GAT1O43505 415 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 MMP20O60882 483 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 TM7SF2O76062 418 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 DLGAP3O95886 979 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 HTR1BP28222 390 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 GKP32189 559 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 STAT5AP42229 794 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 NFIL3Q16649 462 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 KLHL40Q2TBA0 621 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 C5orf22Q49AR2 442 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 NADK2Q4G0N4 442 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 ALFQ53S48 1182 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 CARD16Q5EG05 197 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 TAF8Q7Z7C8 310 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 GRAMD1CQ8IYS0 662 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 SLC34A3Q8N130 599 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 BMPERQ8N8U9 685 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 FAM46DQ8NEK8 389 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 OR7D4Q8NG98 312 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 ATL2Q8NHH9 583 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 CXorf40AQ8TE69 158 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 OR1E3Q8WZA6 343 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 SPRY4Q9C004 299 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 UNKQ9C0B0 810 aaKnown RBP8.29□□□□□ -1.08
CD44-232ENST00000531118 POPDC2Q9HBU9 364 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 FGF22Q9HCT0 170 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 DDIT4Q9NX09 232 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 COX16Q9P0S2 106 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 TMEM9Q9P0T7 183 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 SERTAD1Q9UHV2 236 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 TLK1Q9UKI8 766 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 TRAF3IP3Q9Y228 551 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 DGKBQ9Y6T7 804 aa8.29□□□□□ -1.08
CD44-232ENST00000531118 DNAJB5O75953 348 aa8.28□□□□□ -1.08
CD44-232ENST00000531118 STK17BO94768 372 aa8.28□□□□□ -1.08
CD44-232ENST00000531118 CALCAP01258 141 aa8.28□□□□□ -1.08
CD44-232ENST00000531118 UGT2B4P06133 528 aa8.28□□□□□ -1.08
CD44-232ENST00000531118 PAEPP09466 180 aa8.28□□□□□ -1.08
CD44-232ENST00000531118 FURINP09958 794 aa8.28□□□□□ -1.08
CD44-232ENST00000531118 SLC2A3P11169 496 aa8.28□□□□□ -1.08
CD44-232ENST00000531118 PDIA4P13667 645 aaKnown RBP8.28□□□□□ -1.08
CD44-232ENST00000531118 CCR1P32246 355 aa8.28□□□□□ -1.08
CD44-232ENST00000531118 RPL34P49207 117 aaKnown RBP8.28□□□□□ -1.08
CD44-232ENST00000531118 NASPP49321 788 aaPredicted RBP8.28□□□□□ -1.08
CD44-232ENST00000531118 DNA2P51530 1060 aa8.28□□□□□ -1.08
CD44-232ENST00000531118 KIAA1024LP59773 190 aa8.28□□□□□ -1.08
CD44-232ENST00000531118 DPYDQ12882 1025 aa8.28□□□□□ -1.08
CD44-232ENST00000531118 STILQ15468 1287 aa8.28□□□□□ -1.08
CD44-232ENST00000531118 INPP5JQ15735 1006 aaPredicted RBP8.28□□□□□ -1.08
CD44-232ENST00000531118 ZNF805Q5CZA5 627 aa8.28□□□□□ -1.08
CD44-232ENST00000531118 TMEM214Q6NUQ4 689 aaKnown RBP8.28□□□□□ -1.08
CD44-232ENST00000531118 FOXR2Q6PJQ5 311 aa8.28□□□□□ -1.08
CD44-232ENST00000531118 TMEM270Q6UE05 265 aa8.28□□□□□ -1.08
CD44-232ENST00000531118 KDELC2Q7Z4H8 507 aa8.28□□□□□ -1.08
CD44-232ENST00000531118 SETD3Q86TU7 594 aaPredicted RBP8.28□□□□□ -1.08
CD44-232ENST00000531118 OR4D9Q8NGE8 314 aa8.28□□□□□ -1.08
CD44-232ENST00000531118 KIAA1524Q8TCG1 905 aa8.28□□□□□ -1.08
CD44-232ENST00000531118 C5orf34Q96MH7 638 aa8.28□□□□□ -1.08
CD44-232ENST00000531118 CTRCQ99895 268 aa8.28□□□□□ -1.08
CD44-232ENST00000531118 WRAP53Q9BUR4 548 aaKnown RBP8.28□□□□□ -1.08
CD44-232ENST00000531118 DPEP2Q9H4A9 486 aa8.28□□□□□ -1.08
CD44-232ENST00000531118 ST7Q9NRC1 585 aa8.28□□□□□ -1.08
CD44-232ENST00000531118 KIAA1257Q9ULG3 409 aa8.28□□□□□ -1.08
CD44-232ENST00000531118 COQ6Q9Y2Z9 468 aa8.28□□□□□ -1.08
CD44-232ENST00000531118 TMEM184BQ9Y519 407 aaPredicted RBP8.28□□□□□ -1.08
CD44-232ENST00000531118 OR1A2Q9Y585 309 aa8.28□□□□□ -1.08
CD44-232ENST00000531118 ANKHD1Q8IWZ3 2542 aaKnown RBP8.28□□□□□ -1.08
CD44-232ENST00000531118 RHPN2P1A8MT19 583 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 CDK2AP1O14519 115 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 PAGE1O75459 146 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 ZMPSTE24O75844 475 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 TNFP01375 233 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 PCCBP05166 539 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 NEFLP07196 543 aa8.27□□□□□ -1.09
CD44-232ENST00000531118 F8A1P23610 371 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms