RNA–Protein interactions for RNA: ENST00000530903.1

RPUSD4-205, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-205ENST00000530903 UBAP2Q5T6F2 1119 aaKnown RBP10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 ARMC12Q5T9G4 340 aa10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 CASC4Q6P4E1 433 aa10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 GDPD4Q6W3E5 623 aa10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 ZNF852Q6ZMS4 543 aa10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 CAPN12Q6ZSI9 719 aa10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 ZSWIM9Q86XI8 627 aa10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 IGDCC3Q8IVU1 814 aa10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 C10orf67Q8IYJ2 551 aa10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 IL17RCQ8NAC3 791 aa10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 TXNDC5Q8NBS9 432 aaKnown RBP10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 FBXO36Q8NEA4 188 aa10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 OR8D1Q8WZ84 308 aa10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 CAVIN3Q969G5 261 aa10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 RMDN1Q96DB5 314 aa10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 CFAP36Q96G28 342 aa10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 SIGLEC10Q96LC7 697 aa10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 KLHL32Q96NJ5 620 aa10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 NECAB3Q96P71 396 aaPredicted RBP10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 TUBGCP5Q96RT8 1024 aa10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 WDR83Q9BRX9 315 aaKnown RBP10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 TRIM56Q9BRZ2 755 aaKnown RBP10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 ADGRE3Q9BY15 652 aa10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 CPEB1Q9BZB8 566 aaKnown RBP10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 CD320Q9NPF0 282 aa10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 PRSS16Q9NQE7 514 aa10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 PRDM9Q9NQV7 894 aa10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 SYBUQ9NX95 663 aa10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 BFARQ9NZS9 450 aa10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 SUN2Q9UH99 717 aa10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 MUTYHQ9UIF7 546 aa10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 MAD1L1Q9Y6D9 718 aa10.06□□□□□ -0.8
RPUSD4-205ENST00000530903 CCDC78A2IDD5 438 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 SDR42E2A6NKP2 422 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 AP3B1O00203 1094 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 NPC1O15118 1278 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 ALOX15BO15296 676 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 EIF3HO15372 352 aaKnown RBP eCLIP10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 HTRA2O43464 458 aaPredicted RBP10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 KIF1CO43896 1103 aaKnown RBP10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 SYNCRIPO60506 623 aaKnown RBP10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 EPOP01588 193 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 FGF1P05230 155 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 CTPS1P17812 591 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 NTSR1P30989 418 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 SLC8A1P32418 973 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 NPY2RP49146 381 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 EPHB1P54762 984 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 ENPP2Q13822 863 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 CCINQ13939 588 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 SEPT6Q14141 434 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 ELAVL3Q14576 367 aaKnown RBP10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 GRM3Q14832 879 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 POU6F1Q14863 301 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 SLMAPQ14BN4 828 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 UBXN2BQ14CS0 331 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 E2F5Q15329 346 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 KYNUQ16719 465 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 QPCTQ16769 361 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 LRRC73Q5JTD7 316 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 BEND6Q5SZJ8 279 aaPredicted RBP10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 CFAP58Q5T655 872 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 SDE2Q6IQ49 451 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 CEP128Q6ZU80 1094 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 CACUL1Q86Y37 369 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 GJD3Q8N144 294 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 SIX5Q8N196 739 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 RPLP0P6Q8NHW5 317 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 SNIP1Q8TAD8 396 aaKnown RBP10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 BLOC1S5Q8TDH9 187 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 PYROXD1Q8WU10 500 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 UBLCP1Q8WVY7 318 aaPredicted RBP10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 TXLNGYQ9BZA5 131 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 PHACTR1Q9C0D0 580 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 CDC42EP4Q9H3Q1 356 aaKnown RBP10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 SEMA4AQ9H3S1 761 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 SUV39H2Q9H5I1 410 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 ARNT2Q9HBZ2 717 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 NINJ2Q9NZG7 142 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 SAMD15Q9P1V8 674 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 WNT16Q9UBV4 365 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 TEX264Q9Y6I9 313 aa10.05□□□□□ -0.8
RPUSD4-205ENST00000530903 KPNA3O00505 521 aaPredicted RBP10.04□□□□□ -0.8
RPUSD4-205ENST00000530903 POLR3GO15318 223 aaPredicted RBP10.04□□□□□ -0.8
RPUSD4-205ENST00000530903 FZD6O60353 706 aa10.04□□□□□ -0.8
RPUSD4-205ENST00000530903 ADAM23O75077 832 aa10.04□□□□□ -0.8
RPUSD4-205ENST00000530903 ACSL3O95573 720 aa10.04□□□□□ -0.8
RPUSD4-205ENST00000530903 IL1BP01584 269 aa10.04□□□□□ -0.8
RPUSD4-205ENST00000530903 PRNPP04156 253 aa10.04□□□□□ -0.8
RPUSD4-205ENST00000530903 ALPIP09923 528 aa10.04□□□□□ -0.8
RPUSD4-205ENST00000530903 HOXB2P14652 356 aa10.04□□□□□ -0.8
RPUSD4-205ENST00000530903 TARSP26639 723 aaKnown RBP10.04□□□□□ -0.8
RPUSD4-205ENST00000530903 PSMD8P48556 350 aa10.04□□□□□ -0.8
RPUSD4-205ENST00000530903 METAP1P53582 386 aa10.04□□□□□ -0.8
RPUSD4-205ENST00000530903 MRPS21P82921 87 aaKnown RBP10.04□□□□□ -0.8
RPUSD4-205ENST00000530903 SEMG2Q02383 582 aa10.04□□□□□ -0.8
RPUSD4-205ENST00000530903 KIAA1211LQ6NV74 962 aa10.04□□□□□ -0.8
RPUSD4-205ENST00000530903 Q6ZS52 159 aa10.04□□□□□ -0.8
RPUSD4-205ENST00000530903 CCDC91Q7Z6B0 441 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms