RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 RFPL1O75677 317 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 GRAP2O75791 330 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 LETM1O95202 739 aaPredicted RBP11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 CCNB1P14635 433 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 PFKFB1P16118 471 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 ITIH2P19823 946 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 NR1D1P20393 614 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 BMP6P22004 513 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 XPAP23025 273 aaPredicted RBP11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 VARSP26640 1264 aaKnown RBP11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 TRIM23P36406 574 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 NOP2P46087 812 aaKnown RBP11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 GPLD1P80108 840 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 SLC6A3Q01959 620 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 RAPGEF1Q13905 1077 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 KRTAP21-3Q3LHN1 58 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 KCTD16Q68DU8 428 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 FOXR2Q6PJQ5 311 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 NYAP1Q6ZVC0 841 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 FAM129CQ86XR2 697 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 ZDHHC17Q8IUH5 632 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 UNC5BQ8IZJ1 945 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 WDTC1Q8N5D0 677 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 ESX1Q8N693 406 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 EHBP1Q8NDI1 1231 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 ZDHHC1Q8WTX9 485 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 CASKIN2Q8WXE0 1202 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 FUBP1Q96AE4 644 aaKnown RBP11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 HMCESQ96FZ2 354 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 CPXM1Q96SM3 734 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 TSG101Q99816 390 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 TTYH3Q9C0H2 523 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 ZNF768Q9H5H4 540 aaKnown RBP11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 FGF22Q9HCT0 170 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 CASS4Q9NQ75 786 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 SPATS2LQ9NUQ6 558 aaKnown RBP11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 TLK1Q9UKI8 766 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 POLHQ9Y253 713 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 ACTL7AQ9Y615 435 aa11.69□□□□□ -0.54
AMBRA1-207ENST00000529553 IGHV1OR21-1A0A087WYE8 117 aa11.68□□□□□ -0.54
AMBRA1-207ENST00000529553 A0A1B0GVL5 298 aa11.68□□□□□ -0.54
AMBRA1-207ENST00000529553 ZSCAN5CA6NGD5 496 aaPredicted RBP11.68□□□□□ -0.54
AMBRA1-207ENST00000529553 NEFLP07196 543 aa11.68□□□□□ -0.54
AMBRA1-207ENST00000529553 KRT5P13647 590 aa11.68□□□□□ -0.54
AMBRA1-207ENST00000529553 STAT5AP42229 794 aa11.68□□□□□ -0.54
AMBRA1-207ENST00000529553 PMS2P54278 862 aa11.68□□□□□ -0.54
AMBRA1-207ENST00000529553 MAZP56270 477 aaKnown RBP11.68□□□□□ -0.54
AMBRA1-207ENST00000529553 BIRC2Q13490 618 aa11.68□□□□□ -0.54
AMBRA1-207ENST00000529553 COBLL1Q53SF7 1204 aa11.68□□□□□ -0.54
AMBRA1-207ENST00000529553 LRRC73Q5JTD7 316 aa11.68□□□□□ -0.54
AMBRA1-207ENST00000529553 OTUD1Q5VV17 481 aaPredicted RBP11.68□□□□□ -0.54
AMBRA1-207ENST00000529553 ERICH6BQ5W0A0 696 aa11.68□□□□□ -0.54
AMBRA1-207ENST00000529553 SMYD5Q6GMV2 418 aa11.68□□□□□ -0.54
AMBRA1-207ENST00000529553 ERAP2Q6P179 960 aa11.68□□□□□ -0.54
AMBRA1-207ENST00000529553 OLFML1Q6UWY5 402 aa11.68□□□□□ -0.54
AMBRA1-207ENST00000529553 APLFQ8IW19 511 aaPredicted RBP11.68□□□□□ -0.54
AMBRA1-207ENST00000529553 CCL4L1Q8NHW4 92 aa11.68□□□□□ -0.54
AMBRA1-207ENST00000529553 KREMEN1Q96MU8 473 aa11.68□□□□□ -0.54
AMBRA1-207ENST00000529553 GDAP1L1Q96MZ0 367 aa11.68□□□□□ -0.54
AMBRA1-207ENST00000529553 GSDMCQ9BYG8 508 aa11.68□□□□□ -0.54
AMBRA1-207ENST00000529553 MAGEH1Q9H213 219 aa11.68□□□□□ -0.54
AMBRA1-207ENST00000529553 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.68□□□□□ -0.54
AMBRA1-207ENST00000529553 STAP1Q9ULZ2 295 aa11.68□□□□□ -0.54
AMBRA1-207ENST00000529553 COQ6Q9Y2Z9 468 aa11.68□□□□□ -0.54
AMBRA1-207ENST00000529553 SNX10Q9Y5X0 201 aa11.68□□□□□ -0.54
AMBRA1-207ENST00000529553 POLQO75417 2590 aa11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 INPP4BO15327 924 aa11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 THAP12O43422 761 aa11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 STK17BO94768 372 aa11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 ECEL1O95672 775 aa11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 DLGAP3O95886 979 aa11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 LDLRP01130 860 aa11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 PCCBP05166 539 aa11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 GNA15P30679 374 aa11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 ACVRL1P37023 503 aa11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 MAPKAPK2P49137 400 aa11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 LIG3P49916 1009 aa11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 DEUP1Q05D60 604 aa11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 ILF3Q12906 894 aaKnown RBP eCLIP11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 GRM3Q14832 879 aa11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 UGP2Q16851 508 aa11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 EIF2S3LQ2VIR3 472 aaKnown RBP11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 SLC25A52Q3SY17 297 aa11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 INO80DQ53TQ3 878 aaPredicted RBP11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 ATP1A1-AS1Q5TC04 95 aa11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 NKAIN2Q5VXU1 208 aa11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 ANKRD40Q6AI12 368 aa11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 FAM183BPQ6ZVS7 135 aa11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 ARHGAP22Q7Z5H3 698 aa11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 NRROSQ86YC3 692 aa11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 ARHGEF19Q8IW93 802 aa11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 PLA2G15Q8NCC3 412 aa11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 C1orf131Q8NDD1 294 aaKnown RBP11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 MRPL40Q9NQ50 206 aaKnown RBP11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 TRNAU1APQ9NX07 287 aaKnown RBP11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 TAAR2Q9P1P5 351 aa11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 PCDHGC3Q9UN70 934 aa11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 RPS6KL1Q9Y6S9 549 aa11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 OTOGQ6ZRI0 2925 aa11.67□□□□□ -0.54
AMBRA1-207ENST00000529553 FAM237AA0A1B0GTK4 181 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms