RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 ZNF891A8MT65 544 aaPredicted RBP9.06□□□□□ -0.96
VPS11-203ENST00000529545 B4DGG1 531 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 HGSO14964 777 aaPredicted RBP9.06□□□□□ -0.96
VPS11-203ENST00000529545 CAPN5O15484 640 aaPredicted RBP9.06□□□□□ -0.96
VPS11-203ENST00000529545 NUDT21O43809 227 aaKnown RBP9.06□□□□□ -0.96
VPS11-203ENST00000529545 RAMP2O60895 175 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 PCCBP05166 539 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 TIMP2P16035 220 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 RHOQP17081 205 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 ITIH2P19823 946 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 RHOAP61586 193 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 GUCA2AQ02747 115 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 MTM1Q13496 603 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 GRM3Q14832 879 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 IGFBP7Q16270 282 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 CLPPQ16740 277 aaPredicted RBP9.06□□□□□ -0.96
VPS11-203ENST00000529545 EXOC3L4Q17RC7 722 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 WSCD2Q2TBF2 565 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 AMZ1Q400G9 498 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 ERAP2Q6P179 960 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 LEKR1Q6ZMV7 388 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 ATCAYQ86WG3 371 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 IRF2BP1Q8IU81 584 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 SLITRK4Q8IW52 837 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 C9orf43Q8TAL5 461 aaPredicted RBP9.06□□□□□ -0.96
VPS11-203ENST00000529545 KIAA1524Q8TCG1 905 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 HCAR2Q8TDS4 363 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 NKD1Q969G9 470 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 HMCESQ96FZ2 354 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 TIGD1Q96MW7 591 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 ASPSCR1Q9BZE9 553 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 CDH19Q9H159 772 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 SEMA6CQ9H3T2 930 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 GDPD2Q9HCC8 539 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 LRRC4CQ9HCJ2 640 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 PLCB1Q9NQ66 1216 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 OR12D3Q9UGF7 316 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 MOSPD1Q9UJG1 213 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 MAN1B1Q9UKM7 699 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 MAN2B2Q9Y2E5 1009 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 COQ6Q9Y2Z9 468 aa9.06□□□□□ -0.96
VPS11-203ENST00000529545 ZFC3H1O60293 1989 aaKnown RBP9.06□□□□□ -0.96
VPS11-203ENST00000529545 LRP4O75096 1905 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 GOLGA8SH3BPF8 625 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 PDE2AO00408 941 aaPredicted RBP9.05□□□□□ -0.96
VPS11-203ENST00000529545 LCE2BO14633 110 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 KDELR3O43731 214 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 TMCC1O94876 653 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 CCL4P13236 92 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 SLC9A1P19634 815 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 ALDH4A1P30038 563 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 FLT3P36888 993 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 GABRB2P47870 512 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 STX17P56962 302 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 NRG1Q02297 640 aaPredicted RBP9.05□□□□□ -0.96
VPS11-203ENST00000529545 PAK1Q13153 545 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 HLTFQ14527 1009 aaKnown RBP eCLIP9.05□□□□□ -0.96
VPS11-203ENST00000529545 C16orf72Q14CZ0 275 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 INO80DQ53TQ3 878 aaPredicted RBP9.05□□□□□ -0.96
VPS11-203ENST00000529545 EFHC2Q5JST6 749 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 SPECC1LQ69YQ0 1117 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 SLC47A2Q86VL8 602 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 CACNA2D3Q8IZS8 1091 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 PAF1Q8N7H5 531 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 AGBL5Q8NDL9 886 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 OR56A4Q8NGH8 313 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 OR1E3Q8WZA6 343 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 KIAA1143Q96AT1 154 aaPredicted RBP9.05□□□□□ -0.96
VPS11-203ENST00000529545 TBC1D31Q96DN5 1066 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 PDXPQ96GD0 296 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 CFAP57Q96MR6 1250 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 RDH14Q9HBH5 336 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 ZNF71Q9NQZ8 489 aaPredicted RBP9.05□□□□□ -0.96
VPS11-203ENST00000529545 TMEM248Q9NWD8 314 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 ZDHHC9Q9Y397 364 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 MFHAS1Q9Y4C4 1052 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 DAAM1Q9Y4D1 1078 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 PCDHGA3Q9Y5H0 932 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 LRRK2Q5S007 2527 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 TEX15Q9BXT5 2789 aa9.05□□□□□ -0.96
VPS11-203ENST00000529545 LRRK1Q38SD2 2015 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 CLEC18AA5D8T8 446 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 FOXN3O00409 490 aaPredicted RBP9.04□□□□□ -0.96
VPS11-203ENST00000529545 TNFRSF10CO14798 259 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 B4GAT1O43505 415 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 LIFP15018 202 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 CSTF2P33240 577 aaKnown RBP eCLIP9.04□□□□□ -0.96
VPS11-203ENST00000529545 ADRA1BP35368 520 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 UGT1A3P35503 534 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 NOP2P46087 812 aaKnown RBP9.04□□□□□ -0.96
VPS11-203ENST00000529545 PPM1FP49593 454 aaPredicted RBP9.04□□□□□ -0.96
VPS11-203ENST00000529545 LIG3P49916 1009 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 OR1D5P58170 312 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 KIAA1024LP59773 190 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 ATP11AP98196 1134 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 B4GALNT1Q00973 533 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 TRA2AQ13595 282 aaKnown RBP eCLIP9.04□□□□□ -0.96
VPS11-203ENST00000529545 PEX6Q13608 980 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 SEPT6Q14141 434 aa9.04□□□□□ -0.96
VPS11-203ENST00000529545 AGERQ15109 404 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms