RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 TSPAN3O60637 253 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 PRAMEF4O60810 478 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 SORBS2O94875 1100 aaKnown RBP3.3□□□□□ -1.88
CSDE1-209ENST00000525132 PEX11BO96011 259 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 ZNF286BP0CG31 522 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 RBMY1A1P0DJD3 496 aaKnown RBP3.3□□□□□ -1.88
CSDE1-209ENST00000525132 ATP1A3P13637 1013 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 FPR1P21462 350 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 MCCP23508 829 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 TSPAN7P41732 249 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 CREMQ03060 361 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 GRSF1Q12849 480 aaKnown RBP eCLIP3.3□□□□□ -1.88
CSDE1-209ENST00000525132 PRKG2Q13237 762 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 ILKQ13418 452 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 FOXE3Q13461 319 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 DCTN1Q14203 1278 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 PTK2BQ14289 1009 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 ALDH1L2Q3SY69 923 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 SLC45A4Q5BKX6 768 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 FBXO47Q5MNV8 452 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 WDR45BQ5MNZ6 344 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 DCAF10Q5QP82 559 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 GPATCH4Q5T3I0 446 aaKnown RBP3.3□□□□□ -1.88
CSDE1-209ENST00000525132 ANKRD45Q5TZF3 282 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 CCDC30Q5VVM6 783 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 SPATA1Q5VX52 437 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 ARMC3Q5W041 872 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 C11orf87Q6NUJ2 197 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 TATDN1Q6P1N9 297 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 SEM1Q6ZVN7 128 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 BEND5Q7L4P6 421 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 RSPH3Q86UC2 560 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 MOGAT3Q86VF5 341 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 GATAD2AQ86YP4 633 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 TMTC1Q8IUR5 882 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 PALM2Q8IXS6 379 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 PCYOX1LQ8NBM8 494 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 SLC35B2Q8TB61 432 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 PRCCQ92733 491 aaPredicted RBP3.3□□□□□ -1.88
CSDE1-209ENST00000525132 RAB24Q969Q5 203 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 IQCDQ96DY2 449 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 MRGPRX4Q96LA9 322 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 MNTQ99583 582 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 CENPOQ9BU64 300 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 TMPRSS5Q9H3S3 457 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 DEF6Q9H4E7 631 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 PLEKHA4Q9H4M7 779 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 SERHLQ9NQF3 203 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 PIH1D1Q9NWS0 290 aaKnown RBP3.3□□□□□ -1.88
CSDE1-209ENST00000525132 GDE1Q9NZC3 331 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 ING1Q9UK53 422 aaPredicted RBP3.3□□□□□ -1.88
CSDE1-209ENST00000525132 PLEKHA6Q9Y2H5 1048 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 TMX2Q9Y320 296 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 TTLL3Q9Y4R7 772 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 HS3ST4Q9Y661 456 aa3.3□□□□□ -1.88
CSDE1-209ENST00000525132 A0A1B0GTW7 788 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 ANKRD18BA2A2Z9 1011 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 C17orf102A2RUQ5 167 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 AQP12BA6NM10 295 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 SYT5O00445 386 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 TRIM38O00635 465 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 TRIM24O15164 1050 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 PIN1P1O15428 100 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 THAP12O43422 761 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 TMCC2O75069 709 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 ATP2C2O75185 946 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 IPO13O94829 963 aaKnown RBP3.29□□□□□ -1.88
CSDE1-209ENST00000525132 ENDOD1O94919 500 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 CLDN9O95484 217 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 ANXA2P07355 339 aaKnown RBP3.29□□□□□ -1.88
CSDE1-209ENST00000525132 MYL4P12829 197 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 PTPN2P17706 415 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 MALP21145 153 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 ECHS1P30084 290 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 ACVRL1P37023 503 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 ZEB1P37275 1124 aaPredicted RBP3.29□□□□□ -1.88
CSDE1-209ENST00000525132 MAN2A2P49641 1150 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 RPS16P62249 146 aaKnown RBP3.29□□□□□ -1.88
CSDE1-209ENST00000525132 CDC42EP1Q00587 391 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 MYBPC2Q14324 1141 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 PPP2R5BQ15173 497 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 FAM133BQ5BKY9 247 aaKnown RBP3.29□□□□□ -1.88
CSDE1-209ENST00000525132 TSHZ3Q63HK5 1081 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 KIAA1324Q6UXG2 1013 aaKnown RBP3.29□□□□□ -1.88
CSDE1-209ENST00000525132 KRT77Q7Z794 578 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 FJX1Q86VR8 437 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 TMEM200AQ86VY9 491 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 MEX3DQ86XN8 651 aaKnown RBP3.29□□□□□ -1.88
CSDE1-209ENST00000525132 FTSJ3Q8IY81 847 aaKnown RBP3.29□□□□□ -1.88
CSDE1-209ENST00000525132 ARL14Q8N4G2 192 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 C3orf56Q8N813 242 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 IFI44Q8TCB0 444 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 FUBP1Q96AE4 644 aaKnown RBP3.29□□□□□ -1.88
CSDE1-209ENST00000525132 NMD3Q96D46 503 aaKnown RBP3.29□□□□□ -1.88
CSDE1-209ENST00000525132 ZFYVE19Q96K21 471 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 SNX22Q96L94 193 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 MRGPRX1Q96LB2 322 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 C16orf70Q9BSU1 422 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 TEX13BQ9BXU2 312 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 FTHL17Q9BXU8 183 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms