RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	ASRGL1	Q7L266	308 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	GALNT7	Q86SF2	657 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	TCEAL8	Q8IYN2	117 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	PLD6	Q8N2A8	252 aa	Known RBP	10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	PGBD5	Q8N414	524 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	FIBCD1	Q8N539	461 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	CCNYL1	Q8N7R7	359 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	LPCAT1	Q8NF37	534 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	ARRDC2	Q8TBH0	407 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	STYX	Q8WUJ0	223 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	PDCD6IP	Q8WUM4	868 aa	Known RBP	10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	STMN2	Q93045	179 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	HDAC10	Q969S8	669 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	PRICKLE1	Q96MT3	831 aa	Predicted RBP	10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	MRPL57	Q9BQC6	102 aa	Known RBP	10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	KLF16	Q9BXK1	252 aa	Predicted RBP	10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	NMUR2	Q9GZQ4	415 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	CDH19	Q9H159	772 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	PDF	Q9HBH1	243 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	EML4	Q9HC35	981 aa	Known RBP	10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	GPAM	Q9HCL2	828 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	GTSE1	Q9NYZ3	720 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	ZNF212	Q9UDV6	495 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	TAGLN3	Q9UI15	199 aa		10.82	□□□□□ -0.68
SPIDR-222	ENST00000524006	ANKRD12	Q6UB98	2062 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	NUP210	Q8TEM1	1887 aa	Predicted RBP	10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	LOC285095	A0A1B0GVY8	99 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	UBA6	A0AVT1	1052 aa	Predicted RBP	10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	TTC24	A2A3L6	582 aa	Predicted RBP	10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	C2orf78	A6NCI8	922 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	TK2	O00142	265 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	CD3EAP	O15446	510 aa	Known RBP	10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	ITM2A	O43736	263 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	LUC7L3	O95232	432 aa	Known RBP	10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	CYBB	P04839	570 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	ATXN1L	P0C7T5	689 aa	Known RBP	10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	SLC35E2B	P0CK96	405 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	HDC	P19113	662 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	NCF2	P19878	526 aa	Predicted RBP	10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	ATP5F1	P24539	256 aa	Predicted RBP	10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	CDC25C	P30307	473 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	SERPINB5	P36952	375 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	GRIA4	P48058	902 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	NUMB	P49757	651 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	PDAP1	Q13442	181 aa	Known RBP	10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	CSHL1	Q14406	222 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	TJAP1	Q5JTD0	557 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	AARS2	Q5JTZ9	985 aa	Known RBP	10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	HECTD2	Q5U5R9	776 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	SEL1L3	Q68CR1	1132 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	METTL3	Q86U44	580 aa	Known RBP	10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	RNF135	Q8IUD6	432 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	CILP2	Q8IUL8	1156 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	SLC22A9	Q8IVM8	553 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	MFN1	Q8IWA4	741 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	SUGP1	Q8IWZ8	645 aa	Known RBP	10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	GPR65	Q8IYL9	337 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	TEX9	Q8N6V9	391 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	EFHB	Q8N7U6	833 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	BRSK1	Q8TDC3	778 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	AUTS2	Q8WXX7	1259 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	FAR2	Q96K12	515 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	DNAJC1	Q96KC8	554 aa	Known RBP	10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	EXOC2	Q96KP1	924 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	PSKH2	Q96QS6	385 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	NDN	Q99608	321 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	BTBD10	Q9BSF8	475 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	C2orf49	Q9BVC5	232 aa	Predicted RBP	10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	EMILIN2	Q9BXX0	1053 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	POMK	Q9H5K3	350 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	GKN1	Q9NS71	199 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	ARL8B	Q9NVJ2	186 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	ZNF358	Q9NW07	568 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	OXSM	Q9NWU1	459 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	NCKIPSD	Q9NZQ3	722 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	HACD3	Q9P035	362 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	CXXC1	Q9P0U4	656 aa	Predicted RBP	10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	VTI1B	Q9UEU0	232 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	RIMKLB	Q9ULI2	386 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	RPL26L1	Q9UNX3	145 aa	Known RBP	10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	CDYL	Q9Y232	598 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006	RAP2C	Q9Y3L5	183 aa		10.81	□□□□□ -0.68
SPIDR-222	ENST00000524006		A0A0D9SEW6	157 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	MROH6	A6NGR9	719 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	TRPC5OS	A6NMA1	111 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006		G3V2L1	256 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	TRAFD1	O14545	582 aa	Predicted RBP	10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	NPHS1	O60500	1241 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	NDUFS3	O75489	264 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	TMCC1	O94876	653 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	FGF19	O95750	216 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	EFEMP2	O95967	443 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	GOT2	P00505	430 aa	Known RBP	10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	CCND1	P24385	295 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	ARNT	P27540	789 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	GABRR2	P28476	465 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	MAPK8	P45983	427 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	LEPR	P48357	1165 aa	Known RBP	10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms