RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 TCEA2Q15560 299 aa18.78■□□□□ 0.6
SPIDR-220ENST00000522900 ANKRD20A8PQ5CZ79 823 aa18.78■□□□□ 0.6
SPIDR-220ENST00000522900 MARC1Q5VT66 337 aa18.78■□□□□ 0.6
SPIDR-220ENST00000522900 PDCD6IPQ8WUM4 868 aaKnown RBP18.78■□□□□ 0.6
SPIDR-220ENST00000522900 ZNHIT6Q9NWK9 470 aaKnown RBP18.78■□□□□ 0.6
SPIDR-220ENST00000522900 SPASTQ9UBP0 616 aa18.78■□□□□ 0.6
SPIDR-220ENST00000522900 DKK4Q9UBT3 224 aa18.78■□□□□ 0.6
SPIDR-220ENST00000522900 B4GALT6Q9UBX8 382 aa18.78■□□□□ 0.6
SPIDR-220ENST00000522900 TDRD6O60522 2096 aaKnown RBP18.78■□□□□ 0.6
SPIDR-220ENST00000522900 ZFHX4Q86UP3 3567 aa18.77■□□□□ 0.6
SPIDR-220ENST00000522900 CFAP69A5D8W1 941 aa18.77■□□□□ 0.6
SPIDR-220ENST00000522900 YY2O15391 372 aa18.77■□□□□ 0.6
SPIDR-220ENST00000522900 OPA1O60313 960 aa18.77■□□□□ 0.6
SPIDR-220ENST00000522900 MFAP3LO75121 409 aa18.77■□□□□ 0.6
SPIDR-220ENST00000522900 MT-CO3P00414 261 aa18.77■□□□□ 0.6
SPIDR-220ENST00000522900 ELFN1P0C7U0 828 aa18.77■□□□□ 0.6
SPIDR-220ENST00000522900 TSHRP16473 764 aa18.77■□□□□ 0.6
SPIDR-220ENST00000522900 HSPA9P38646 679 aaKnown RBP18.77■□□□□ 0.6
SPIDR-220ENST00000522900 PPARDQ03181 441 aa18.77■□□□□ 0.6
SPIDR-220ENST00000522900 IHHQ14623 411 aa18.77■□□□□ 0.6
SPIDR-220ENST00000522900 MESDQ14696 234 aa18.77■□□□□ 0.6
SPIDR-220ENST00000522900 NFATC4Q14934 902 aa18.77■□□□□ 0.6
SPIDR-220ENST00000522900 PAFAH1B3Q15102 231 aaKnown RBP18.77■□□□□ 0.6
SPIDR-220ENST00000522900 CDKN3Q16667 212 aa18.77■□□□□ 0.6
SPIDR-220ENST00000522900 ALG11Q2TAA5 492 aa18.77■□□□□ 0.6
SPIDR-220ENST00000522900 ZCCHC8Q6NZY4 707 aaKnown RBP18.77■□□□□ 0.6
SPIDR-220ENST00000522900 ENPP7Q6UWV6 458 aa18.77■□□□□ 0.6
SPIDR-220ENST00000522900 PELI3Q8N2H9 469 aa18.77■□□□□ 0.6
SPIDR-220ENST00000522900 TEX26Q8N6G2 289 aa18.77■□□□□ 0.6
SPIDR-220ENST00000522900 PQLC3Q8N755 202 aa18.77■□□□□ 0.6
SPIDR-220ENST00000522900 SLC35G2Q8TBE7 412 aa18.77■□□□□ 0.6
SPIDR-220ENST00000522900 RAPGEF5Q92565 580 aa18.77■□□□□ 0.6
SPIDR-220ENST00000522900 FUBP1Q96AE4 644 aaKnown RBP18.77■□□□□ 0.6
SPIDR-220ENST00000522900 SLC13A1Q9BZW2 595 aa18.77■□□□□ 0.6
SPIDR-220ENST00000522900 NHEJ1Q9H9Q4 299 aaPredicted RBP18.77■□□□□ 0.6
SPIDR-220ENST00000522900 NT5MQ9NPB1 228 aa18.77■□□□□ 0.6
SPIDR-220ENST00000522900 SALL4Q9UJQ4 1053 aa18.77■□□□□ 0.6
SPIDR-220ENST00000522900 CLCA2Q9UQC9 943 aa18.77■□□□□ 0.6
SPIDR-220ENST00000522900 A0A0U1RQS6 177 aa18.76■□□□□ 0.59
SPIDR-220ENST00000522900 TPP1O14773 563 aa18.76■□□□□ 0.59
SPIDR-220ENST00000522900 GARSP41250 739 aaKnown RBP18.76■□□□□ 0.59
SPIDR-220ENST00000522900 GALNT2Q10471 571 aa18.76■□□□□ 0.59
SPIDR-220ENST00000522900 SLC10A2Q12908 348 aaPredicted RBP18.76■□□□□ 0.59
SPIDR-220ENST00000522900 PDK2Q15119 407 aa18.76■□□□□ 0.59
SPIDR-220ENST00000522900 TSR1Q2NL82 804 aaKnown RBP18.76■□□□□ 0.59
SPIDR-220ENST00000522900 GUSBP11Q6P575 273 aa18.76■□□□□ 0.59
SPIDR-220ENST00000522900 C19orf48Q6RUI8 117 aa18.76■□□□□ 0.59
SPIDR-220ENST00000522900 RD3Q7Z3Z2 195 aa18.76■□□□□ 0.59
SPIDR-220ENST00000522900 HID1Q8IV36 788 aa18.76■□□□□ 0.59
SPIDR-220ENST00000522900 DCBLD1Q8N8Z6 715 aa18.76■□□□□ 0.59
SPIDR-220ENST00000522900 IFI44Q8TCB0 444 aa18.76■□□□□ 0.59
SPIDR-220ENST00000522900 NSMCE1Q8WV22 266 aa18.76■□□□□ 0.59
SPIDR-220ENST00000522900 IL12RB2Q99665 862 aa18.76■□□□□ 0.59
SPIDR-220ENST00000522900 DSPP15924 2871 aaKnown RBP18.75■□□□□ 0.59
SPIDR-220ENST00000522900 CPED1A4D0V7 1026 aa18.75■□□□□ 0.59
SPIDR-220ENST00000522900 LMO7DNF2Z398 122 aa18.75■□□□□ 0.59
SPIDR-220ENST00000522900 SOCS5O75159 536 aa18.75■□□□□ 0.59
SPIDR-220ENST00000522900 CPP00450 1065 aa18.75■□□□□ 0.59
SPIDR-220ENST00000522900 ANXA6P08133 673 aa18.75■□□□□ 0.59
SPIDR-220ENST00000522900 PDHA1P08559 390 aa18.75■□□□□ 0.59
SPIDR-220ENST00000522900 DUSP3P51452 185 aaPredicted RBP18.75■□□□□ 0.59
SPIDR-220ENST00000522900 HK3P52790 923 aa18.75■□□□□ 0.59
SPIDR-220ENST00000522900 SRP54P61011 504 aaKnown RBP18.75■□□□□ 0.59
SPIDR-220ENST00000522900 GBE1Q04446 702 aa18.75■□□□□ 0.59
SPIDR-220ENST00000522900 TBX2Q13207 712 aaPredicted RBP18.75■□□□□ 0.59
SPIDR-220ENST00000522900 MTM1Q13496 603 aa18.75■□□□□ 0.59
SPIDR-220ENST00000522900 ACOX1Q15067 660 aa18.75■□□□□ 0.59
SPIDR-220ENST00000522900 CDCP2Q5VXM1 449 aa18.75■□□□□ 0.59
SPIDR-220ENST00000522900 LRRC49Q8IUZ0 686 aa18.75■□□□□ 0.59
SPIDR-220ENST00000522900 SLC35F3Q8IY50 421 aa18.75■□□□□ 0.59
SPIDR-220ENST00000522900 CACTIN-AS1Q8N1I8 211 aa18.75■□□□□ 0.59
SPIDR-220ENST00000522900 BBS5Q8N3I7 341 aa18.75■□□□□ 0.59
SPIDR-220ENST00000522900 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.75■□□□□ 0.59
SPIDR-220ENST00000522900 SPOCK2Q92563 424 aa18.75■□□□□ 0.59
SPIDR-220ENST00000522900 FAF2Q96CS3 445 aa18.75■□□□□ 0.59
SPIDR-220ENST00000522900 TBATAQ96M53 351 aa18.75■□□□□ 0.59
SPIDR-220ENST00000522900 CCDC42Q96M95 316 aa18.75■□□□□ 0.59
SPIDR-220ENST00000522900 COQ10AQ96MF6 247 aa18.75■□□□□ 0.59
SPIDR-220ENST00000522900 SMIM14Q96QK8 99 aa18.75■□□□□ 0.59
SPIDR-220ENST00000522900 SEMA3CQ99985 751 aa18.75■□□□□ 0.59
SPIDR-220ENST00000522900 ZNF670Q9BS34 389 aa18.75■□□□□ 0.59
SPIDR-220ENST00000522900 BOCQ9BWV1 1114 aa18.75■□□□□ 0.59
SPIDR-220ENST00000522900 LGR4Q9BXB1 951 aa18.75■□□□□ 0.59
SPIDR-220ENST00000522900 GPSM3Q9Y4H4 160 aa18.75■□□□□ 0.59
SPIDR-220ENST00000522900 CHD6Q8TD26 2715 aa18.74■□□□□ 0.59
SPIDR-220ENST00000522900 TMEM202A6NGA9 273 aa18.74■□□□□ 0.59
SPIDR-220ENST00000522900 MATN3O15232 486 aa18.74■□□□□ 0.59
SPIDR-220ENST00000522900 CASC3O15234 703 aaKnown RBP18.74■□□□□ 0.59
SPIDR-220ENST00000522900 PGLSO95336 258 aa18.74■□□□□ 0.59
SPIDR-220ENST00000522900 GP1BAP07359 652 aa18.74■□□□□ 0.59
SPIDR-220ENST00000522900 KRT7P08729 469 aa18.74■□□□□ 0.59
SPIDR-220ENST00000522900 TPM1P09493 284 aa18.74■□□□□ 0.59
SPIDR-220ENST00000522900 CTPS1P17812 591 aa18.74■□□□□ 0.59
SPIDR-220ENST00000522900 LHCGRP22888 699 aa18.74■□□□□ 0.59
SPIDR-220ENST00000522900 KDELR1P24390 212 aa18.74■□□□□ 0.59
SPIDR-220ENST00000522900 MAN1A1P33908 653 aa18.74■□□□□ 0.59
SPIDR-220ENST00000522900 ITKQ08881 620 aa18.74■□□□□ 0.59
SPIDR-220ENST00000522900 CNGA3Q16281 694 aa18.74■□□□□ 0.59
SPIDR-220ENST00000522900 FAM182AQ5T1J6 154 aa18.74■□□□□ 0.59
SPIDR-220ENST00000522900 DENND2CQ68D51 928 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms