RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 SMARCE1Q969G3 411 aa3.56□□□□□ -1.84
HMGN1P28-201ENST00000521340 GCNAQ96QF7 691 aa3.56□□□□□ -1.84
HMGN1P28-201ENST00000521340 SH2D3AQ9BRG2 576 aa3.56□□□□□ -1.84
HMGN1P28-201ENST00000521340 TEX12Q9BXU0 123 aa3.56□□□□□ -1.84
HMGN1P28-201ENST00000521340 SPRY4Q9C004 299 aa3.56□□□□□ -1.84
HMGN1P28-201ENST00000521340 ALDH8A1Q9H2A2 487 aaPredicted RBP3.56□□□□□ -1.84
HMGN1P28-201ENST00000521340 R3HDMLQ9H3Y0 253 aa3.56□□□□□ -1.84
HMGN1P28-201ENST00000521340 ST6GALNAC4Q9H4F1 302 aa3.56□□□□□ -1.84
HMGN1P28-201ENST00000521340 SMARCAD1Q9H4L7 1026 aa3.56□□□□□ -1.84
HMGN1P28-201ENST00000521340 KLHL31Q9H511 634 aa3.56□□□□□ -1.84
HMGN1P28-201ENST00000521340 MAP6D1Q9H9H5 199 aa3.56□□□□□ -1.84
HMGN1P28-201ENST00000521340 MAGEE1Q9HCI5 957 aa3.56□□□□□ -1.84
HMGN1P28-201ENST00000521340 PAPOLBQ9NRJ5 636 aaKnown RBP3.56□□□□□ -1.84
HMGN1P28-201ENST00000521340 ANKRD10Q9NXR5 420 aa3.56□□□□□ -1.84
HMGN1P28-201ENST00000521340 OGFRQ9NZT2 677 aa3.56□□□□□ -1.84
HMGN1P28-201ENST00000521340 MTMR6Q9Y217 621 aa3.56□□□□□ -1.84
HMGN1P28-201ENST00000521340 FAM96BQ9Y3D0 163 aa3.56□□□□□ -1.84
HMGN1P28-201ENST00000521340 PTRH2Q9Y3E5 179 aaKnown RBP3.56□□□□□ -1.84
HMGN1P28-201ENST00000521340 DMRT1Q9Y5R6 373 aa3.56□□□□□ -1.84
HMGN1P28-201ENST00000521340 MAGED1Q9Y5V3 778 aaPredicted RBP3.56□□□□□ -1.84
HMGN1P28-201ENST00000521340 LOC102723996A0A087X1L8 192 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 A6NNC1 897 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 EIF3CLB5ME19 914 aaKnown RBP3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 TLR2O60603 784 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 UGDHO60701 494 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 MMP2P08253 660 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 CD63P08962 238 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 ETFAP13804 333 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 IL7RP16871 459 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 ATP5F1P24539 256 aaPredicted RBP3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 CIITAP33076 1130 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 SLC15A1P46059 708 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 NRIP1P48552 1158 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 CAMPP49913 170 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 PNLIPRP2P54317 469 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 MRPS5P82675 430 aaKnown RBP3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 GRAPQ13588 217 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 RUNX2Q13950 521 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 VEPH1Q14D04 833 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 PPP2R5BQ15173 497 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 ADIPOQQ15848 244 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 SMTNL2Q2TAL5 461 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 CERKLQ49MI3 558 aaPredicted RBP3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 CEP78Q5JTW2 689 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 PRAMEF19Q5SWL8 479 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 RARS2Q5T160 578 aaKnown RBP3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 AKNAD1Q5T1N1 836 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 KRT79Q5XKE5 535 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 SUMO4Q6EEV6 95 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 ZNF788Q6ZQV5 615 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 MTSS1LQ765P7 747 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 CYB5R4Q7L1T6 521 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 LINGO2Q7L985 606 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 MRGPRGQ86SM5 289 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 DENND6AQ8IWF6 608 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 GALNT16Q8N428 558 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 HUS1BQ8NHY5 278 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 GPT2Q8TD30 523 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 DUSP19Q8WTR2 217 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 TMCO6Q96DC7 493 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 PGAP3Q96FM1 320 aaPredicted RBP3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 EGLN2Q96KS0 407 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 TTC14Q96N46 770 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 SIGLEC11Q96RL6 698 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 TUBB6Q9BUF5 446 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 SCNM1Q9BWG6 230 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 NUF2Q9BZD4 464 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 B3GNT4Q9C0J1 378 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 ANKRD2Q9GZV1 360 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 CDT1Q9H211 546 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 PPIL3Q9H2H8 161 aaKnown RBP3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 SH2D4AQ9H788 454 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 MKKSQ9NPJ1 570 aaPredicted RBP3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 PDGFCQ9NRA1 345 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 THSD1Q9NS62 852 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 WDR35Q9P2L0 1181 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 CFDP1Q9UEE9 299 aaPredicted RBP3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 CHORDC1Q9UHD1 332 aaPredicted RBP3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 WBP11Q9Y2W2 641 aaKnown RBP3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 CCL27Q9Y4X3 112 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 PCSK5Q92824 1860 aa3.55□□□□□ -1.84
HMGN1P28-201ENST00000521340 A0A1W2PPC1 479 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 CTDSP2O14595 271 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 PRPF4O43172 522 aaKnown RBP eCLIP3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 MITFO75030 526 aaPredicted RBP3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 TPPPO94811 219 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 ZNF182P17025 639 aaPredicted RBP3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 HOXD9P28356 352 aaPredicted RBP3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 GPR12P47775 334 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 MMP14P50281 582 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 CLCN5P51795 746 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 RAD23AP54725 363 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 KRT83P78385 493 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 ADORA2A-AS1P86434 159 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 CXCL9Q07325 125 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 AIMP1Q12904 312 aaKnown RBP3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 STIM1Q13586 685 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 NTRK2Q16620 822 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 DUSP6Q16828 381 aa3.54□□□□□ -1.84
HMGN1P28-201ENST00000521340 TMEM119Q4V9L6 283 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms