RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 A8MT66 165 aa25.84■■□□□ 1.73
COL13A1-213ENST00000520267 WISP3O95389 354 aaPredicted RBP25.84■■□□□ 1.73
COL13A1-213ENST00000520267 GNRH1P01148 92 aa25.84■■□□□ 1.73
COL13A1-213ENST00000520267 ATP6V1C1P21283 382 aa25.84■■□□□ 1.73
COL13A1-213ENST00000520267 CDC25CP30307 473 aa25.84■■□□□ 1.73
COL13A1-213ENST00000520267 SH2D4BQ5SQS7 431 aa25.84■■□□□ 1.73
COL13A1-213ENST00000520267 DENND1CQ8IV53 801 aa25.84■■□□□ 1.73
COL13A1-213ENST00000520267 OR13C4Q8NGS5 318 aa25.84■■□□□ 1.73
COL13A1-213ENST00000520267 MAGEH1Q9H213 219 aa25.84■■□□□ 1.73
COL13A1-213ENST00000520267 ZNF385DQ9H6B1 395 aa25.84■■□□□ 1.73
COL13A1-213ENST00000520267 MTRRQ9UBK8 725 aa25.84■■□□□ 1.73
COL13A1-213ENST00000520267 H3BNC9 293 aa25.84■■□□□ 1.73
COL13A1-213ENST00000520267 PPM1LQ5SGD2 360 aa25.84■■□□□ 1.73
COL13A1-213ENST00000520267 NXNQ6DKJ4 435 aa25.84■■□□□ 1.73
COL13A1-213ENST00000520267 KLC3Q6P597 504 aa25.84■■□□□ 1.73
COL13A1-213ENST00000520267 PIM3Q86V86 326 aa25.84■■□□□ 1.73
COL13A1-213ENST00000520267 EFCAB3Q8N7B9 438 aa25.84■■□□□ 1.73
COL13A1-213ENST00000520267 SCG3Q8WXD2 468 aaKnown RBP25.84■■□□□ 1.73
COL13A1-213ENST00000520267 NSMCE3Q96MG7 304 aa25.84■■□□□ 1.73
COL13A1-213ENST00000520267 PRICKLE1Q96MT3 831 aaPredicted RBP25.84■■□□□ 1.73
COL13A1-213ENST00000520267 CATSPER2Q96P56 530 aa25.84■■□□□ 1.73
COL13A1-213ENST00000520267 CDK5RAP1Q96SZ6 601 aaKnown RBP25.84■■□□□ 1.73
COL13A1-213ENST00000520267 SPON2Q9BUD6 331 aa25.84■■□□□ 1.73
COL13A1-213ENST00000520267 CCDC28BQ9BUN5 200 aa25.84■■□□□ 1.73
COL13A1-213ENST00000520267 EPOP01588 193 aa25.83■■□□□ 1.73
COL13A1-213ENST00000520267 SERPINF2P08697 491 aa25.83■■□□□ 1.73
COL13A1-213ENST00000520267 ANPEPP15144 967 aa25.83■■□□□ 1.73
COL13A1-213ENST00000520267 SLC11A2P49281 568 aa25.83■■□□□ 1.73
COL13A1-213ENST00000520267 CCL23P55773 120 aa25.83■■□□□ 1.73
COL13A1-213ENST00000520267 SEMA3AQ14563 771 aa25.83■■□□□ 1.73
COL13A1-213ENST00000520267 ACAP2Q15057 778 aa25.83■■□□□ 1.73
COL13A1-213ENST00000520267 RPS27LQ71UM5 84 aaKnown RBP25.83■■□□□ 1.73
COL13A1-213ENST00000520267 LMNTD2Q8IXW0 634 aa25.83■■□□□ 1.73
COL13A1-213ENST00000520267 LRRC43Q8N309 656 aa25.83■■□□□ 1.73
COL13A1-213ENST00000520267 CPSF7Q8N684 471 aaKnown RBP25.83■■□□□ 1.73
COL13A1-213ENST00000520267 STON2Q8WXE9 905 aa25.83■■□□□ 1.73
COL13A1-213ENST00000520267 VN1R3Q9BXE9 311 aa25.83■■□□□ 1.73
COL13A1-213ENST00000520267 CCDC162PA2VCL2 907 aa25.83■■□□□ 1.72
COL13A1-213ENST00000520267 ZNF840PA6NDX5 716 aa25.83■■□□□ 1.72
COL13A1-213ENST00000520267 COCHO43405 550 aa25.83■■□□□ 1.72
COL13A1-213ENST00000520267 PQBP1O60828 265 aaKnown RBP25.83■■□□□ 1.72
COL13A1-213ENST00000520267 RGRP47804 291 aa25.83■■□□□ 1.72
COL13A1-213ENST00000520267 PLK1P53350 603 aa25.83■■□□□ 1.72
COL13A1-213ENST00000520267 CMPK2Q5EBM0 449 aa25.83■■□□□ 1.72
COL13A1-213ENST00000520267 GPR158Q5T848 1215 aa25.83■■□□□ 1.72
COL13A1-213ENST00000520267 ALG1LQ6GMV1 187 aa25.83■■□□□ 1.72
COL13A1-213ENST00000520267 ZNF549Q6P9A3 640 aa25.83■■□□□ 1.72
COL13A1-213ENST00000520267 MGME1Q9BQP7 344 aa25.83■■□□□ 1.72
COL13A1-213ENST00000520267 GTSE1Q9NYZ3 720 aa25.83■■□□□ 1.72
COL13A1-213ENST00000520267 ANGPTL2Q9UKU9 493 aa25.83■■□□□ 1.72
COL13A1-213ENST00000520267 IPO13O94829 963 aaKnown RBP25.82■■□□□ 1.72
COL13A1-213ENST00000520267 SEC24AO95486 1093 aa25.82■■□□□ 1.72
COL13A1-213ENST00000520267 GLP2RO95838 553 aa25.82■■□□□ 1.72
COL13A1-213ENST00000520267 EFEMP2O95967 443 aa25.82■■□□□ 1.72
COL13A1-213ENST00000520267 KLKB1P03952 638 aa25.82■■□□□ 1.72
COL13A1-213ENST00000520267 RBP1P09455 135 aa25.82■■□□□ 1.72
COL13A1-213ENST00000520267 THRAP10827 490 aa25.82■■□□□ 1.72
COL13A1-213ENST00000520267 ACADSP16219 412 aa25.82■■□□□ 1.72
COL13A1-213ENST00000520267 SGSHP51688 502 aa25.82■■□□□ 1.72
COL13A1-213ENST00000520267 CDH4P55283 916 aa25.82■■□□□ 1.72
COL13A1-213ENST00000520267 TBL3Q12788 808 aaKnown RBP25.82■■□□□ 1.72
COL13A1-213ENST00000520267 BTG3Q14201 252 aaPredicted RBP25.82■■□□□ 1.72
COL13A1-213ENST00000520267 SNX32Q86XE0 403 aa25.82■■□□□ 1.72
COL13A1-213ENST00000520267 BRSK1Q8TDC3 778 aa25.82■■□□□ 1.72
COL13A1-213ENST00000520267 MARK4Q96L34 752 aa25.82■■□□□ 1.72
COL13A1-213ENST00000520267 TRIB3Q96RU7 358 aa25.82■■□□□ 1.72
COL13A1-213ENST00000520267 GKN1Q9NS71 199 aa25.82■■□□□ 1.72
COL13A1-213ENST00000520267 CD3EAPO15446 510 aaKnown RBP25.81■■□□□ 1.72
COL13A1-213ENST00000520267 UPP2O95045 317 aa25.81■■□□□ 1.72
COL13A1-213ENST00000520267 SLC4A1P02730 911 aa25.81■■□□□ 1.72
COL13A1-213ENST00000520267 PPARGP37231 505 aaPredicted RBP25.81■■□□□ 1.72
COL13A1-213ENST00000520267 ABL2P42684 1182 aa25.81■■□□□ 1.72
COL13A1-213ENST00000520267 HECTD3Q5T447 861 aa25.81■■□□□ 1.72
COL13A1-213ENST00000520267 FAM45BPQ6NSW5 357 aa25.81■■□□□ 1.72
COL13A1-213ENST00000520267 FAM45AQ8TCE6 357 aa25.81■■□□□ 1.72
COL13A1-213ENST00000520267 TNFRSF12AQ9NP84 129 aa25.81■■□□□ 1.72
COL13A1-213ENST00000520267 RGSL1A5PLK6 1076 aa25.81■■□□□ 1.72
COL13A1-213ENST00000520267 RPP40O75818 363 aaKnown RBP25.81■■□□□ 1.72
COL13A1-213ENST00000520267 HMGA1P17096 107 aaKnown RBP25.81■■□□□ 1.72
COL13A1-213ENST00000520267 KCNC1P48547 511 aa25.81■■□□□ 1.72
COL13A1-213ENST00000520267 TUFMP49411 452 aaKnown RBP25.81■■□□□ 1.72
COL13A1-213ENST00000520267 AP2B1P63010 937 aa25.81■■□□□ 1.72
COL13A1-213ENST00000520267 SULT2A1Q06520 285 aa25.81■■□□□ 1.72
COL13A1-213ENST00000520267 USP41Q3LFD5 358 aa25.81■■□□□ 1.72
COL13A1-213ENST00000520267 HPS6Q86YV9 775 aa25.81■■□□□ 1.72
COL13A1-213ENST00000520267 CCDC126Q96EE4 140 aa25.81■■□□□ 1.72
COL13A1-213ENST00000520267 PHF21BQ96EK2 531 aa25.81■■□□□ 1.72
COL13A1-213ENST00000520267 ALG9Q9H6U8 611 aa25.81■■□□□ 1.72
COL13A1-213ENST00000520267 PPM1HQ9ULR3 514 aa25.81■■□□□ 1.72
COL13A1-213ENST00000520267 AIM2O14862 343 aa25.8■■□□□ 1.72
COL13A1-213ENST00000520267 NDST3O95803 873 aa25.8■■□□□ 1.72
COL13A1-213ENST00000520267 MYCP01106 439 aaPredicted RBP25.8■■□□□ 1.72
COL13A1-213ENST00000520267 ALDH7A1P49419 539 aaKnown RBP25.8■■□□□ 1.72
COL13A1-213ENST00000520267 PDZD8Q8NEN9 1154 aa25.8■■□□□ 1.72
COL13A1-213ENST00000520267 PEX13Q92968 403 aa25.8■■□□□ 1.72
COL13A1-213ENST00000520267 CCDC124Q96CT7 223 aaKnown RBP25.8■■□□□ 1.72
COL13A1-213ENST00000520267 MAELQ96JY0 434 aaKnown RBP25.8■■□□□ 1.72
COL13A1-213ENST00000520267 TTC1Q99614 292 aa25.8■■□□□ 1.72
COL13A1-213ENST00000520267 UBA2Q9UBT2 640 aaPredicted RBP25.8■■□□□ 1.72
COL13A1-213ENST00000520267 SEPT3Q9UH03 358 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms